SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4560 4561 4562 4563 4564 4565 4566 4567 4568 4569 4570 4571 4572 4573 4574 4575 4576 4577 4578 4579 4580 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    913801 8wul:R (2.36) BS01 peptide ? N/A A0A583ZB34 38684865
    913802 8wur:A (2.08) BS01 FNO N/A GO:0008233 ... P0DTC1 38257765
    913803 8wus:A (2.9) BS01 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913804 8wus:A (2.9) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913805 8wus:A (2.9) BS03 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913806 8wus:E (2.9) BS01 rna ? N/A Q8UN00 38811740
    913807 8wus:E (2.9) BS02 dna ? N/A Q8UN00 38811740
    913808 8wut:A (3.0) BS01 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913809 8wut:A (3.0) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913810 8wut:A (3.0) BS03 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913811 8wut:E (3.0) BS01 rna ? N/A Q8UN00 38811740
    913812 8wut:E (3.0) BS02 dna ? N/A Q8UN00 38811740
    913813 8wuu:A (3.2) BS01 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913814 8wuu:A (3.2) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913815 8wuu:A (3.2) BS03 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913816 8wuv:A (3.0) BS01 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913817 8wuv:A (3.0) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913818 8wuv:A (3.0) BS03 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811740
    913819 8wuv:E (3.0) BS01 rna ? N/A Q8UN00 38811740
    913820 8wuv:E (3.0) BS02 dna ? N/A Q8UN00 38811740
    913821 8wuw:A (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913822 8wuw:B (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913823 8wuw:C (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913824 8wuw:D (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913825 8wuw:E (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913826 8wuw:F (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913827 8wuw:G (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913828 8wuw:H (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913829 8wuw:I (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913830 8wuw:J (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913831 8wuw:K (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913832 8wuw:L (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913833 8wuw:M (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913834 8wuw:N (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913835 8wux:A (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913836 8wux:B (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913837 8wux:C (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913838 8wux:D (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913839 8wux:E (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913840 8wux:F (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913841 8wux:G (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913842 8wux:H (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913843 8wux:I (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913844 8wux:J (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913845 8wux:K (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913846 8wux:L (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913847 8wux:M (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913848 8wux:N (2.6) BS01 ANP 5.6.1.7 GO:0005524 ... D3DK86 38492570
    913849 8wuy:A (2.6) BS01 XBF ? GO:0003677 ... P22736 38232685
    913850 8wuz:A (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913851 8wuz:A (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913852 8wuz:B (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913853 8wuz:B (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913854 8wuz:C (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913855 8wuz:C (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913856 8wuz:D (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913857 8wuz:D (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913858 8wuz:E (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913859 8wuz:E (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913860 8wuz:F (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913861 8wuz:F (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913862 8wuz:G (2.9) BS01 XFU N/A GO:0004176 ... Q16740 39243740
    913863 8wuz:G (2.9) BS02 XFU N/A GO:0004176 ... Q16740 39243740
    913864 8wv1:0 (3.99) BS01 rna N/A GO:0003735 ... P80339 N/A
    913865 8wv1:0 (3.99) BS02 ZN N/A GO:0003735 ... P80339 N/A
    913866 8wv1:13 (3.99) BS01 rna N/A GO:0003735 ... P35871 N/A
    913867 8wv1:13 (3.99) BS02 rna N/A GO:0003735 ... P35871 N/A
    913868 8wv1:13 (3.99) BS03 ZN N/A GO:0003735 ... P35871 N/A
    913869 8wv1:2 (3.99) BS01 rna N/A GO:0003735 ... P80340 N/A
    913870 8wv1:3 (3.99) BS01 rna N/A GO:0003735 ... Q5SKU1 N/A
    913871 8wv1:4 (3.99) BS01 rna N/A GO:0003735 ... Q5SHR2 N/A
    913872 8wv1:4 (3.99) BS02 ZN N/A GO:0003735 ... Q5SHR2 N/A
    913873 8wv1:5 (3.99) BS01 rna N/A GO:0003735 ... P80339 N/A
    913874 8wv1:5 (3.99) BS02 ZN N/A GO:0003735 ... P80339 N/A
    913875 8wv1:6 (3.99) BS01 rna N/A GO:0003735 ... P35871 N/A
    913876 8wv1:6 (3.99) BS02 rna N/A GO:0003735 ... P35871 N/A
    913877 8wv1:6 (3.99) BS03 ZN N/A GO:0003735 ... P35871 N/A
    913878 8wv1:7 (3.99) BS01 rna N/A GO:0003735 ... P80340 N/A
    913879 8wv1:8 (3.99) BS01 rna N/A GO:0003735 ... Q5SKU1 N/A
    913880 8wv1:9 (3.99) BS01 rna N/A GO:0003735 ... Q5SHR2 N/A
    913881 8wv1:C (3.99) BS01 rna N/A GO:0002181 ... P60405 N/A
    913882 8wv1:D (3.99) BS01 rna N/A GO:0003735 ... Q5SHN8 N/A
    913883 8wv1:E (3.99) BS01 rna N/A GO:0003735 ... Q5SHN9 N/A
    913884 8wv1:F (3.99) BS01 rna N/A GO:0000049 ... Q5SHQ0 N/A
    913885 8wv1:F (3.99) BS02 rna N/A GO:0000049 ... Q5SHQ0 N/A
    913886 8wv1:G (3.99) BS01 rna N/A GO:0002181 ... P0DOY8 N/A
    913887 8wv1:H (3.99) BS01 rna N/A GO:0003735 ... Q5SLQ1 N/A
    913888 8wv1:I (3.99) BS01 rna N/A GO:0003729 ... P60488 N/A
    913889 8wv1:J (3.99) BS01 rna N/A GO:0003735 ... Q5SHP8 N/A
    913890 8wv1:K (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ7 N/A
    913891 8wv1:L (3.99) BS01 rna N/A GO:0003735 ... P60489 N/A
    913892 8wv1:L (3.99) BS02 rna N/A GO:0003735 ... P60489 N/A
    913893 8wv1:M (3.99) BS01 rna N/A GO:0003735 ... Q9Z9H5 N/A
    913894 8wv1:N (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ4 N/A
    913895 8wv1:N (3.99) BS02 rna N/A GO:0003735 ... Q5SHQ4 N/A
    913896 8wv1:O (3.99) BS01 rna N/A GO:0003735 ... P60490 N/A
    913897 8wv1:O (3.99) BS02 MG N/A GO:0003735 ... P60490 N/A
    913898 8wv1:P (3.99) BS01 rna N/A GO:0000027 ... P60491 N/A
    913899 8wv1:Q (3.99) BS01 rna N/A GO:0003723 ... P60492 N/A
    913900 8wv1:R (3.99) BS01 rna N/A GO:0003735 ... Q5SHP3 N/A
    913901 8wv1:S (3.99) BS01 rna N/A GO:0003735 ... Q5SHP0 N/A
    913902 8wv1:S (3.99) BS02 MG N/A GO:0003735 ... Q5SHP0 N/A
    913903 8wv1:T (3.99) BS01 rna N/A GO:0003723 ... Q5SHP9 N/A
    913904 8wv1:T (3.99) BS02 ZN N/A GO:0003723 ... Q5SHP9 N/A
    913905 8wv1:U (3.99) BS01 rna N/A GO:0003723 ... Q5SHZ1 N/A
    913906 8wv1:U (3.99) BS02 rna N/A GO:0003723 ... Q5SHZ1 N/A
    913907 8wv1:V (3.99) BS01 rna N/A GO:0003735 ... P60493 N/A
    913908 8wv1:V (3.99) BS02 rna N/A GO:0003735 ... P60493 N/A
    913909 8wv1:W (3.99) BS01 rna N/A GO:0003735 ... P60494 N/A
    913910 8wv1:X (3.99) BS01 rna N/A GO:0003735 ... Q5SHP6 N/A
    913911 8wv1:Y (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ6 N/A
    913912 8wv1:Y (3.99) BS02 rna N/A GO:0003735 ... Q5SHQ6 N/A
    913913 8wv1:Z (3.99) BS01 rna N/A GO:0003735 ... Q5SJE1 N/A
    913914 8wv1:c (3.99) BS01 rna N/A GO:0002181 ... P60405 N/A
    913915 8wv1:c (3.99) BS02 MG N/A GO:0002181 ... P60405 N/A
    913916 8wv1:d (3.99) BS01 rna N/A GO:0003735 ... Q5SHN8 N/A
    913917 8wv1:d (3.99) BS02 MG N/A GO:0003735 ... Q5SHN8 N/A
    913918 8wv1:e (3.99) BS01 rna N/A GO:0003735 ... Q5SHN9 N/A
    913919 8wv1:f (3.99) BS01 rna N/A GO:0000049 ... Q5SHQ0 N/A
    913920 8wv1:f (3.99) BS02 rna N/A GO:0000049 ... Q5SHQ0 N/A
    913921 8wv1:g (3.99) BS01 rna N/A GO:0002181 ... P0DOY8 N/A
    913922 8wv1:h (3.99) BS01 rna N/A GO:0003735 ... Q5SLQ1 N/A
    913923 8wv1:i (3.99) BS01 rna N/A GO:0003729 ... P60488 N/A
    913924 8wv1:j (3.99) BS01 rna N/A GO:0003735 ... Q5SHP8 N/A
    913925 8wv1:j (3.99) BS02 MG N/A GO:0003735 ... Q5SHP8 N/A
    913926 8wv1:k (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ7 N/A
    913927 8wv1:k (3.99) BS02 MG N/A GO:0003735 ... Q5SHQ7 N/A
    913928 8wv1:l (3.99) BS01 rna N/A GO:0003735 ... P60489 N/A
    913929 8wv1:l (3.99) BS02 rna N/A GO:0003735 ... P60489 N/A
    913930 8wv1:m (3.99) BS01 rna N/A GO:0003735 ... Q9Z9H5 N/A
    913931 8wv1:m (3.99) BS02 MG N/A GO:0003735 ... Q9Z9H5 N/A
    913932 8wv1:n (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ4 N/A
    913933 8wv1:n (3.99) BS02 rna N/A GO:0003735 ... Q5SHQ4 N/A
    913934 8wv1:o (3.99) BS01 rna N/A GO:0003735 ... P60490 N/A
    913935 8wv1:p (3.99) BS01 rna N/A GO:0000027 ... P60491 N/A
    913936 8wv1:q (3.99) BS01 rna N/A GO:0003723 ... P60492 N/A
    913937 8wv1:r (3.99) BS01 rna N/A GO:0003735 ... Q5SHP3 N/A
    913938 8wv1:s (3.99) BS01 rna N/A GO:0003735 ... Q5SHP0 N/A
    913939 8wv1:t (3.99) BS01 rna N/A GO:0003723 ... Q5SHP9 N/A
    913940 8wv1:t (3.99) BS02 ZN N/A GO:0003723 ... Q5SHP9 N/A
    913941 8wv1:u (3.99) BS01 rna N/A GO:0003723 ... Q5SHZ1 N/A
    913942 8wv1:u (3.99) BS02 rna N/A GO:0003723 ... Q5SHZ1 N/A
    913943 8wv1:v (3.99) BS01 rna N/A GO:0003735 ... P60493 N/A
    913944 8wv1:w (3.99) BS01 rna N/A GO:0003735 ... P60494 N/A
    913945 8wv1:x (3.99) BS01 rna N/A GO:0003735 ... Q5SHP6 N/A
    913946 8wv1:y (3.99) BS01 rna N/A GO:0003735 ... Q5SHQ6 N/A
    913947 8wv1:y (3.99) BS02 rna N/A GO:0003735 ... Q5SHQ6 N/A
    913948 8wv1:y (3.99) BS03 MG N/A GO:0003735 ... Q5SHQ6 N/A
    913949 8wv1:z (3.99) BS01 rna N/A GO:0003735 ... Q5SJE1 N/A
    913950 8wv1:z (3.99) BS02 ZN N/A GO:0003735 ... Q5SJE1 N/A
    913951 8wv4:A (3.3) BS01 CA N/A N/A P02741 38935342
    913952 8wv4:A (3.3) BS02 CA N/A N/A P02741 38935342
    913953 8wv4:B (3.3) BS01 CA N/A N/A P02741 38935342
    913954 8wv4:B (3.3) BS02 CA N/A N/A P02741 38935342
    913955 8wv4:C (3.3) BS01 CA N/A N/A P02741 38935342
    913956 8wv4:C (3.3) BS02 CA N/A N/A P02741 38935342
    913957 8wv4:D (3.3) BS01 CA N/A N/A P02741 38935342
    913958 8wv4:D (3.3) BS02 CA N/A N/A P02741 38935342
    913959 8wv4:E (3.3) BS01 CA N/A N/A P02741 38935342
    913960 8wv4:E (3.3) BS02 CA N/A N/A P02741 38935342
    913961 8wv5:A (3.5) BS01 CA N/A N/A P02741 38935342
    913962 8wv5:A (3.5) BS02 CA N/A N/A P02741 38935342
    913963 8wv5:B (3.5) BS01 CA N/A N/A P02741 38935342
    913964 8wv5:B (3.5) BS02 CA N/A N/A P02741 38935342
    913965 8wv5:C (3.5) BS01 CA N/A N/A P02741 38935342
    913966 8wv5:C (3.5) BS02 CA N/A N/A P02741 38935342
    913967 8wv5:D (3.5) BS01 CA N/A N/A P02741 38935342
    913968 8wv5:D (3.5) BS02 CA N/A N/A P02741 38935342
    913969 8wv5:E (3.5) BS01 CA N/A N/A P02741 38935342
    913970 8wv5:E (3.5) BS02 CA N/A N/A P02741 38935342
    913971 8wv5:F (3.5) BS01 CA N/A N/A P02741 38935342
    913972 8wv5:F (3.5) BS02 CA N/A N/A P02741 38935342
    913973 8wv5:G (3.5) BS01 CA N/A N/A P02741 38935342
    913974 8wv5:G (3.5) BS02 CA N/A N/A P02741 38935342
    913975 8wv5:H (3.5) BS01 CA N/A N/A P02741 38935342
    913976 8wv5:H (3.5) BS02 CA N/A N/A P02741 38935342
    913977 8wv5:I (3.5) BS01 CA N/A N/A P02741 38935342
    913978 8wv5:I (3.5) BS02 CA N/A N/A P02741 38935342
    913979 8wv5:J (3.5) BS01 CA N/A N/A P02741 38935342
    913980 8wv5:J (3.5) BS02 CA N/A N/A P02741 38935342
    913981 8wv8:A (2.93) BS01 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913982 8wv8:A (2.93) BS02 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913983 8wv8:B (2.93) BS01 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913984 8wv8:B (2.93) BS02 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913985 8wv8:B (2.93) BS03 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913986 8wv8:B (2.93) BS04 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913987 8wvb:A (2.5) BS01 FAD 1.14.13.- GO:0071949 ... B5M9L6 38069118
    913988 8wvb:B (2.5) BS01 FAD 1.14.13.- GO:0071949 ... B5M9L6 38069118
    913989 8wvd:A (1.66) BS01 UD1 N/A GO:0008194 ... K7NBW3 38867497
    913990 8wve:A (2.729) BS01 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913991 8wve:A (2.729) BS02 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913992 8wve:A (2.729) BS03 MG 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913993 8wve:B (2.729) BS01 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913994 8wve:B (2.729) BS02 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913995 8wve:B (2.729) BS03 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913996 8wve:B (2.729) BS04 ATP 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913997 8wve:B (2.729) BS05 MG 2.7.11.1
    3.6.4.-
    GO:0000287 ... Q79PF4 38803331
    913998 8wvf:A (3.757) BS01 FAD 1.14.13.- GO:0071949 ... B5M9L6 38069118
    913999 8wvf:B (3.757) BS01 FAD 1.14.13.- GO:0071949 ... B5M9L6 38069118
    914000 8wvg:A (3.18) BS01 XEQ N/A GO:0002552 ... Q05940 39284862

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).