SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4562 4563 4564 4565 4566 4567 4568 4569 4570 4571 4572 4573 4574 4575 4576 4577 4578 4579 4580 4581 4582 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    914201 8wx7:B (2.02) BS01 XD8 N/A GO:0004725 ... Q06124 39110625
    914202 8wxe:m (4.0) BS01 peptide ? GO:0002250 ... A0A1B0GX56
    B7Z8K6
    38657677
    914203 8wxe:m (4.0) BS02 CLR ? GO:0002250 ... A0A1B0GX56
    B7Z8K6
    38657677
    914204 8wxe:n (4.0) BS01 peptide ? GO:0005886 ... A0A0B4J1U4 38657677
    914205 8wxk:A (2.26) BS01 NAD N/A GO:0003978 ... A0ACD6B995 N/A
    914206 8wxk:A (2.26) BS02 UPG N/A GO:0003978 ... A0ACD6B995 N/A
    914207 8wxk:B (2.26) BS01 NAD N/A GO:0003978 ... A0ACD6B995 N/A
    914208 8wxk:B (2.26) BS02 UPG N/A GO:0003978 ... A0ACD6B995 N/A
    914209 8wxk:C (2.26) BS01 NAD N/A GO:0003978 ... A0ACD6B995 N/A
    914210 8wxk:C (2.26) BS02 UPG N/A GO:0003978 ... A0ACD6B995 N/A
    914211 8wxk:D (2.26) BS01 NAD N/A GO:0003978 ... A0ACD6B995 N/A
    914212 8wxk:D (2.26) BS02 UPG N/A GO:0003978 ... A0ACD6B995 N/A
    914213 8wxq:A (1.9) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914214 8wxq:B (1.9) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914215 8wxr:A (2.08) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914216 8wxr:B (2.08) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914217 8wxt:A (1.83) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914218 8wxu:B (2.37) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914219 8wxv:A (2.4) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914220 8wxv:C (2.4) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914221 8wxw:A (1.86) BS01 peptide N/A GO:0004222 ... Q76NL8 39217277
    914222 8wxw:A (1.86) BS02 ZN N/A GO:0004222 ... Q76NL8 39217277
    914223 8wxx:A (2.1) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914224 8wxx:B (2.1) BS01 peptide N/A GO:0000122 ... P61964 38876301
    914225 8wxy:A (2.87) BS01 XGN ? N/A O60885 38175809
    914226 8wxy:B (2.87) BS01 XGN ? N/A O60885 38175809
    914227 8wxy:C (2.87) BS01 XGN ? N/A O60885 38175809
    914228 8wxz:A (2.3) BS01 peptide N/A GO:0004222 ... Q76NL8 39217277
    914229 8wxz:A (2.3) BS02 ZN N/A GO:0004222 ... Q76NL8 39217277
    914230 8wy0:b (3.8) BS01 peptide ? GO:0004888 ... P20963 38657677
    914231 8wy0:b (3.8) BS02 CLR ? GO:0004888 ... P20963 38657677
    914232 8wy0:e (3.8) BS01 peptide ? GO:0004888 ... P07766 38657677
    914233 8wy0:g (3.8) BS01 CLR ? GO:0004888 ... P09693 38657677
    914234 8wy0:m (3.8) BS01 peptide ? GO:0002250 ... A0JD36
    B7Z8K6
    38657677
    914235 8wy0:n (3.8) BS01 peptide ? GO:0002250 ... P0CF51
    Q99603
    38657677
    914236 8wy3:A (2.78) BS01 XHE ? N/A O60885 38175809
    914237 8wy3:B (2.78) BS01 XHE ? N/A O60885 38175809
    914238 8wy3:C (2.78) BS01 XHE ? N/A O60885 38175809
    914239 8wy4:A (2.81) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    914240 8wy4:A (2.81) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    914241 8wy4:B (2.81) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    914242 8wy4:B (2.81) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    914243 8wy4:C (2.81) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    914244 8wy4:C (2.81) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    914245 8wy4:D (2.81) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    914246 8wy4:D (2.81) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    914247 8wy5:A (3.12) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914248 8wy5:A (3.12) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914249 8wy5:B (3.12) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914250 8wy5:B (3.12) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914251 8wy5:C (3.12) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914252 8wy5:C (3.12) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914253 8wy5:C (3.12) BS03 CA 3.1.-.- N/A J8H9C1 38471529
    914254 8wy5:D (3.12) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914255 8wy5:D (3.12) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914256 8wy5:D (3.12) BS03 CA 3.1.-.- N/A J8H9C1 38471529
    914257 8wy7:A (2.83) BS01 XHN ? N/A O60885 38175809
    914258 8wy7:B (2.83) BS01 XHN ? N/A O60885 38175809
    914259 8wy7:C (2.83) BS01 XHN ? N/A O60885 38175809
    914260 8wyb:A (3.37) BS01 NAD ? N/A N/A 38555355
    914261 8wyb:B (3.37) BS01 NAD ? N/A N/A 38555355
    914262 8wyb:C (3.37) BS01 NAD ? N/A N/A 38555355
    914263 8wyb:D (3.37) BS01 NAD ? N/A N/A 38555355
    914264 8wyc:A (3.0) BS01 NAD ? N/A N/A 38555355
    914265 8wyc:B (3.0) BS01 NAD ? N/A N/A 38555355
    914266 8wyc:C (3.0) BS01 NAD ? N/A N/A 38555355
    914267 8wyc:D (3.0) BS01 NAD ? N/A N/A 38555355
    914268 8wyf:A (2.85) BS01 NAD N/A N/A N/A 38555355
    914269 8wyf:B (2.85) BS01 NAD N/A N/A N/A 38555355
    914270 8wyf:C (2.85) BS01 NAD N/A N/A N/A 38555355
    914271 8wyf:D (2.85) BS01 NAD N/A N/A N/A 38555355
    914272 8wyg:A (3.13) BS01 XHN ? N/A P25440 38175809
    914273 8wyg:A (3.13) BS02 XHN ? N/A P25440 38175809
    914274 8wyg:B (3.13) BS01 XHN ? N/A P25440 38175809
    914275 8wyg:C (3.13) BS01 XHN ? N/A P25440 38175809
    914276 8wyg:C (3.13) BS02 XHN ? N/A P25440 38175809
    914277 8wyg:D (3.13) BS01 XHN ? N/A P25440 38175809
    914278 8wyi:a (3.9) BS01 peptide ? GO:0004888 ... P20963 38657677
    914279 8wyi:m (3.9) BS01 peptide ? N/A A0JD36
    B7Z8K6
    P01848
    38657677
    914280 8wyi:n (3.9) BS01 peptide ? GO:0002250 ... P0CF51
    Q99603
    38657677
    914281 8wyp:A (1.24) BS01 XUK ? N/A O60885 38006801
    914282 8wyp:A (1.24) BS02 XUK ? N/A O60885 38006801
    914283 8wyr:M (3.39) BS01 CA N/A GO:0005576 ... O43866
    P60568
    39333069
    914284 8wyr:M (3.39) BS02 CA N/A GO:0005576 ... O43866
    P60568
    39333069
    914285 8wys:M (3.41) BS01 CA N/A GO:0005576 ... O43866
    P60568
    39333069
    914286 8wys:M (3.41) BS02 CA N/A GO:0005576 ... O43866
    P60568
    39333069
    914287 8wyt:A (2.7) BS01 H8F N/A GO:0004222 ... Q76NL8 39217277
    914288 8wyt:A (2.7) BS02 ZN N/A GO:0004222 ... Q76NL8 39217277
    914289 8wyu:A (3.2) BS01 ZN N/A GO:0004222 ... Q76NL8 39217277
    914290 8wyw:A (1.9) BS01 XFB N/A GO:0004672 ... P43405 N/A
    914291 8wyw:B (1.9) BS01 XFB N/A GO:0004672 ... P43405 N/A
    914292 8wyx:A (3.5) BS01 ZN N/A GO:0004222 ... Q76NL8 39217277
    914293 8wyy:A (3.1) BS01 ZN N/A GO:0004222 ... Q76NL8 39217277
    914294 8wz0:A (2.45) BS01 XQF N/A GO:0008233 ... P0DTC1 N/A
    914295 8wz0:B (2.45) BS01 XQF N/A GO:0008233 ... P0DTC1 N/A
    914296 8wz2:R (2.73) BS01 peptide N/A GO:0004930 ... Q96P65 38830850
    914297 8wz6:A (2.16) BS01 NAD N/A GO:0004013 ... Q5ZTY7 38735607
    914298 8wz6:A (2.16) BS02 XI6 N/A GO:0004013 ... Q5ZTY7 38735607
    914299 8wz7:A (1.922) BS01 NAD N/A GO:0004013 ... Q5ZTY7 38735607
    914300 8wz7:A (1.922) BS02 ADN N/A GO:0004013 ... Q5ZTY7 38735607
    914301 8wz8:A (2.583) BS01 NAD N/A GO:0004013 ... Q5ZTY7 38735607
    914302 8wz9:A (1.649) BS01 NAD N/A GO:0004013 ... Q5ZTY7 38735607
    914303 8wz9:A (1.649) BS02 ADE N/A GO:0004013 ... Q5ZTY7 38735607
    914304 8wzc:A (1.925) BS01 rna N/A N/A O15037 39167961
    914305 8wzc:A (1.925) BS02 MG N/A N/A O15037 39167961
    914306 8wzc:A (1.925) BS03 MG N/A N/A O15037 39167961
    914307 8wzf:A (1.6) BS01 XTX N/A GO:0003796 ... P00698 38951539
    914308 8wzg:A (1.6) BS01 XTX N/A GO:0003796 ... P00698 38951539
    914309 8wzh:A (3.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914310 8wzh:A (3.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914311 8wzh:B (3.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914312 8wzh:B (3.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914313 8wzh:C (3.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914314 8wzh:C (3.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914315 8wzh:D (3.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914316 8wzh:D (3.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914317 8wzj:A (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914318 8wzj:A (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914319 8wzj:B (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914320 8wzj:B (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914321 8wzj:C (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914322 8wzj:C (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914323 8wzj:D (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914324 8wzj:D (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914325 8wzk:A (2.4) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914326 8wzk:A (2.4) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914327 8wzk:B (2.4) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914328 8wzk:B (2.4) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914329 8wzk:C (2.4) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914330 8wzk:C (2.4) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914331 8wzk:D (2.4) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914332 8wzk:D (2.4) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914333 8wzm:A (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914334 8wzm:A (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914335 8wzm:B (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914336 8wzm:B (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914337 8wzm:C (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914338 8wzm:C (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914339 8wzm:D (2.7) BS01 HEM N/A GO:0000302 ... P04040 38935342
    914340 8wzm:D (2.7) BS02 NDP N/A GO:0000302 ... P04040 38935342
    914341 8wzn:A (1.8) BS01 ZN N/A GO:0004842 ... O60260 N/A
    914342 8wzn:A (1.8) BS02 ZN N/A GO:0004842 ... O60260 N/A
    914343 8wzn:A (1.8) BS03 ZN N/A GO:0004842 ... O60260 N/A
    914344 8wzn:A (1.8) BS04 ZN N/A GO:0004842 ... O60260 N/A
    914345 8wzn:A (1.8) BS05 ZN N/A GO:0004842 ... O60260 N/A
    914346 8wzn:A (1.8) BS06 ZN N/A GO:0004842 ... O60260 N/A
    914347 8wzn:A (1.8) BS07 ZN N/A GO:0004842 ... O60260 N/A
    914348 8wzn:A (1.8) BS08 ZN N/A GO:0004842 ... O60260 N/A
    914349 8wzo:A (2.25) BS01 ZN N/A GO:0004842 ... O60260 N/A
    914350 8wzo:A (2.25) BS02 ZN N/A GO:0004842 ... O60260 N/A
    914351 8wzo:A (2.25) BS03 ZN N/A GO:0004842 ... O60260 N/A
    914352 8wzo:A (2.25) BS04 ZN N/A GO:0004842 ... O60260 N/A
    914353 8wzo:A (2.25) BS05 ZN N/A GO:0004842 ... O60260 N/A
    914354 8wzo:A (2.25) BS06 ZN N/A GO:0004842 ... O60260 N/A
    914355 8wzo:A (2.25) BS07 ZN N/A GO:0004842 ... O60260 N/A
    914356 8wzo:A (2.25) BS08 ZN N/A GO:0004842 ... O60260 N/A
    914357 8wzp:B (1.76) BS01 XIU 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0DTD1 38056159
    914358 8wzq:A (1.66) BS01 XIU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38056159
    914359 8wzq:B (1.66) BS01 XIU 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38056159
    914360 8wzr:A (1.6) BS01 XTX N/A GO:0003796 ... P00698 38951539
    914361 8wzt:A (1.6) BS01 XTX N/A GO:0003796 ... P00698 38951539
    914362 8wzv:A (1.6) BS01 XTX N/A GO:0003796 ... P00698 38951539
    914363 8wzy:A (1.87) BS01 ZN N/A GO:0016787 ... N/A N/A
    914364 8wzy:A (1.87) BS02 ZN N/A GO:0016787 ... N/A N/A
    914365 8x01:A (3.01) BS01 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... C0JJA4 38760379
    914366 8x01:A (3.01) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... C0JJA4 38760379
    914367 8x05:A (1.13) BS01 GLC N/A GO:0004553 ... Q02321 N/A
    914368 8x05:A (1.13) BS02 BGC N/A GO:0004553 ... Q02321 N/A
    914369 8x05:A (1.13) BS03 BGC N/A GO:0004553 ... Q02321 N/A
    914370 8x09:A (1.65) BS01 MGL N/A GO:0004553 ... Q02321 N/A
    914371 8x09:A (1.65) BS02 SGC N/A GO:0004553 ... Q02321 N/A
    914372 8x09:A (1.65) BS03 BGC N/A GO:0004553 ... Q02321 N/A
    914373 8x09:A (1.65) BS04 BGC N/A GO:0004553 ... Q02321 N/A
    914374 8x0b:A (3.1) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914375 8x0b:A (3.1) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914376 8x0b:B (3.1) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914377 8x0b:B (3.1) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914378 8x0c:A (3.2) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914379 8x0c:A (3.2) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914380 8x0c:B (3.2) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914381 8x0c:B (3.2) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914382 8x0d:A (3.5) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914383 8x0d:A (3.5) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914384 8x0d:B (3.5) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914385 8x0d:B (3.5) BS02 XQT N/A GO:0004930 ... P41594 39805839
    914386 8x0e:A (3.4) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914387 8x0e:B (3.4) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914388 8x0f:A (3.3) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914389 8x0f:A (3.3) BS02 XRQ N/A GO:0004930 ... P41594 39805839
    914390 8x0f:B (3.3) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914391 8x0g:A (3.0) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914392 8x0g:B (3.0) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914393 8x0h:A (4.1) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914394 8x0h:B (4.1) BS01 QUS N/A GO:0004930 ... P41594 39805839
    914395 8x0i:A (1.08) BS01 IDC N/A GO:0004553 ... Q02321 N/A
    914396 8x0k:D (3.5) BS01 CA N/A N/A P98155 N/A
    914397 8x0k:H (3.5) BS01 CA N/A N/A P98155 N/A
    914398 8x0k:L (3.5) BS01 CA N/A N/A P98155 N/A
    914399 8x0k:P (3.5) BS01 CA N/A N/A P98155 N/A
    914400 8x0l:D (3.5) BS01 CA N/A N/A P98155 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).