SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    914401 8x0l:H (3.5) BS01 CA N/A N/A P98155 N/A
    914402 8x0l:L (3.5) BS01 CA N/A N/A P98155 N/A
    914403 8x0m:D (3.5) BS01 CA N/A N/A P98155 N/A
    914404 8x0m:H (3.5) BS01 CA N/A N/A P98155 N/A
    914405 8x0n:A (2.8) BS01 rna N/A GO:0003676 ... P09651 39313323
    914406 8x0o:A (3.35) BS01 TYR N/A GO:0004058 ... P54769 N/A
    914407 8x0o:A (3.35) BS02 TYR N/A GO:0004058 ... P54769 N/A
    914408 8x0o:B (3.35) BS01 TYR N/A GO:0004058 ... P54769 N/A
    914409 8x0o:C (3.35) BS01 TYR N/A GO:0004058 ... P54769 N/A
    914410 8x0o:D (3.35) BS01 TYR N/A GO:0004058 ... P54769 N/A
    914411 8x0o:D (3.35) BS02 TYR N/A GO:0004058 ... P54769 N/A
    914412 8x0p:A (3.35) BS01 PLP N/A GO:0004058 ... P54769 N/A
    914413 8x0p:A (3.35) BS02 142 N/A GO:0004058 ... P54769 N/A
    914414 8x0p:A (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914415 8x0p:B (3.35) BS01 142 N/A GO:0004058 ... P54769 N/A
    914416 8x0p:B (3.35) BS02 PLP N/A GO:0004058 ... P54769 N/A
    914417 8x0p:B (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914418 8x0p:C (3.35) BS01 PLP N/A GO:0004058 ... P54769 N/A
    914419 8x0p:C (3.35) BS02 142 N/A GO:0004058 ... P54769 N/A
    914420 8x0p:C (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914421 8x0p:D (3.35) BS01 142 N/A GO:0004058 ... P54769 N/A
    914422 8x0p:D (3.35) BS02 PLP N/A GO:0004058 ... P54769 N/A
    914423 8x0p:D (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914424 8x0p:E (3.35) BS01 PLP N/A GO:0004058 ... P54769 N/A
    914425 8x0p:E (3.35) BS02 142 N/A GO:0004058 ... P54769 N/A
    914426 8x0p:E (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914427 8x0p:F (3.35) BS01 142 N/A GO:0004058 ... P54769 N/A
    914428 8x0p:F (3.35) BS02 PLP N/A GO:0004058 ... P54769 N/A
    914429 8x0p:F (3.35) BS03 142 N/A GO:0004058 ... P54769 N/A
    914430 8x0q:A (1.0) BS01 BGC N/A GO:0004553 ... Q02321 N/A
    914431 8x0q:A (1.0) BS02 BGC N/A GO:0004553 ... Q02321 N/A
    914432 8x0q:A (1.0) BS03 BGC N/A GO:0004553 ... Q02321 N/A
    914433 8x0q:A (1.0) BS04 GLC N/A GO:0004553 ... Q02321 N/A
    914434 8x0v:A (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914435 8x0v:B (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914436 8x0v:C (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914437 8x0v:D (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914438 8x0v:E (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914439 8x0v:F (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914440 8x0v:G (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914441 8x0v:H (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914442 8x0v:I (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914443 8x0v:J (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914444 8x0v:K (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914445 8x0v:L (2.4) BS01 XP3 N/A N/A A0A084QTE3 N/A
    914446 8x0w:B (3.1) BS01 LEU N/A GO:0002720 ... Q01650 40780412
    914447 8x15:A (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914448 8x15:A (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914449 8x15:B (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914450 8x15:B (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914451 8x15:C (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914452 8x15:C (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914453 8x15:D (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914454 8x15:E (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914455 8x15:E (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914456 8x15:F (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914457 8x15:F (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914458 8x15:G (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914459 8x15:G (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914460 8x15:H (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914461 8x15:H (3.2) BS02 dna ? GO:0000781 ... P62805 38331872
    914462 8x15:I (3.2) BS01 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914463 8x15:I (3.2) BS02 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914464 8x15:J (3.2) BS01 dna ? GO:0000122 ... Q15906 38331872
    914465 8x15:M (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914466 8x15:N (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914467 8x15:O (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914468 8x15:O (3.2) BS02 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914469 8x15:P (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914470 8x15:Q (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914471 8x15:R (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914472 8x15:T (3.2) BS01 ATP ? GO:0000723 ... O96019 38331872
    914473 8x15:U (3.2) BS01 ATP 3.6.4.- GO:0000776 ... P60709 38331872
    914474 8x15:V (3.2) BS01 dna ? GO:0000122 ... Q9NPF5 38331872
    914475 8x16:R (3.29) BS01 Q8L ? GO:0001609 ... P0DMS8 38627384
    914476 8x17:R (3.19) BS01 XS0 ? GO:0001609 ... P0DMS8 38627384
    914477 8x18:A (2.25) BS01 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914478 8x18:A (2.25) BS02 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914479 8x18:A (2.25) BS03 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914480 8x18:A (2.25) BS04 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914481 8x18:B (2.25) BS01 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914482 8x18:B (2.25) BS02 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914483 8x18:B (2.25) BS03 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914484 8x18:B (2.25) BS04 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914485 8x18:B (2.25) BS05 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914486 8x18:B (2.25) BS06 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914487 8x18:B (2.25) BS07 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914488 8x18:B (2.25) BS08 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914489 8x18:B (2.25) BS09 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914490 8x18:B (2.25) BS10 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914491 8x18:B (2.25) BS11 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914492 8x18:B (2.25) BS12 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914493 8x18:B (2.25) BS13 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914494 8x18:B (2.25) BS14 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914495 8x18:B (2.25) BS15 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914496 8x18:B (2.25) BS16 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914497 8x18:B (2.25) BS17 BGC N/A GO:0005975 ... Q8P3C6 38957137
    914498 8x19:A (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914499 8x19:A (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914500 8x19:B (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914501 8x19:B (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914502 8x19:C (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914503 8x19:C (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914504 8x19:D (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914505 8x19:D (3.2) BS02 dna ? GO:0000781 ... P62805 38331872
    914506 8x19:E (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914507 8x19:E (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914508 8x19:F (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914509 8x19:F (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914510 8x19:G (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914511 8x19:G (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914512 8x19:H (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914513 8x19:H (3.2) BS02 dna ? GO:0000781 ... P62805 38331872
    914514 8x19:I (3.2) BS01 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914515 8x19:I (3.2) BS02 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914516 8x19:I (3.2) BS03 ADP 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914517 8x19:I (3.2) BS04 BEF 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914518 8x19:M (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914519 8x19:N (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914520 8x19:O (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914521 8x19:P (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914522 8x19:Q (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914523 8x19:R (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914524 8x19:T (3.2) BS01 ATP ? GO:0000723 ... O96019 38331872
    914525 8x19:U (3.2) BS01 ATP 3.6.4.- GO:0000776 ... P60709 38331872
    914526 8x19:V (3.2) BS01 dna ? GO:0000122 ... Q9NPF5 38331872
    914527 8x1a:B (1.604) BS01 G6P ? GO:0015888 ... A0A0H3AFK0 38704889
    914528 8x1c:A (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914529 8x1c:A (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914530 8x1c:B (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914531 8x1c:B (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914532 8x1c:C (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914533 8x1c:C (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914534 8x1c:D (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914535 8x1c:D (3.2) BS02 dna ? GO:0000781 ... P62805 38331872
    914536 8x1c:E (3.2) BS01 dna ? GO:0000786 ... Q93077 38331872
    914537 8x1c:E (3.2) BS02 dna ? GO:0000786 ... Q93077 38331872
    914538 8x1c:F (3.2) BS01 dna ? GO:0000786 ... P62807 38331872
    914539 8x1c:F (3.2) BS02 dna ? GO:0000786 ... P62807 38331872
    914540 8x1c:G (3.2) BS01 dna ? GO:0000786 ... P68431 38331872
    914541 8x1c:G (3.2) BS02 dna ? GO:0000786 ... P68431 38331872
    914542 8x1c:H (3.2) BS01 dna ? GO:0000781 ... P62805 38331872
    914543 8x1c:I (3.2) BS01 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914544 8x1c:I (3.2) BS02 dna 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914545 8x1c:I (3.2) BS03 ADP 3.6.4.- GO:0000785 ... Q6ZRS2 38331872
    914546 8x1c:K (3.2) BS01 ATP ? GO:0000812 ... Q9GZN1 38331872
    914547 8x1c:L (3.2) BS01 dna ? GO:0000812 ... O43257 38331872
    914548 8x1c:M (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914549 8x1c:N (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914550 8x1c:O (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914551 8x1c:P (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914552 8x1c:Q (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 38331872
    914553 8x1c:R (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 38331872
    914554 8x1c:S (3.2) BS01 dna 3.6.4.- GO:0000776 ... P60709 38331872
    914555 8x1c:T (3.2) BS01 ATP ? GO:0000723 ... O96019 38331872
    914556 8x1c:U (3.2) BS01 ATP 3.6.4.- GO:0000776 ... P60709 38331872
    914557 8x1c:V (3.2) BS01 dna ? GO:0000122 ... Q9NPF5 38331872
    914558 8x1c:W (3.2) BS01 dna ? GO:0000278 ... O95619 38331872
    914559 8x1f:A (2.3) BS01 PLP ? GO:0003824 ... Q0C8G1 N/A
    914560 8x1f:B (2.3) BS01 PLP ? GO:0003824 ... Q0C8G1 N/A
    914561 8x1i:B (4.0) BS01 ADP N/A N/A Q24VP4 40499760
    914562 8x1n:A (3.31) BS01 ZN ? GO:0005615 ... P02771 38678117
    914563 8x1s:A (2.37) BS01 LPE N/A GO:0005452 ... P40879 N/A
    914564 8x1s:A (2.37) BS02 I2U N/A GO:0005452 ... P40879 N/A
    914565 8x1s:B (2.37) BS01 LPE N/A GO:0005452 ... P40879 N/A
    914566 8x1s:B (2.37) BS02 I2U N/A GO:0005452 ... P40879 N/A
    914567 8x1u:A (2.21) BS01 OXL N/A GO:0005452 ... P40879 N/A
    914568 8x1u:A (2.21) BS02 LPE N/A GO:0005452 ... P40879 N/A
    914569 8x1u:A (2.21) BS03 LPE N/A GO:0005452 ... P40879 N/A
    914570 8x1u:A (2.21) BS04 LPE N/A GO:0005452 ... P40879 N/A
    914571 8x1u:A (2.21) BS05 LPE N/A GO:0005452 ... P40879 N/A
    914572 8x1u:A (2.21) BS06 CLR N/A GO:0005452 ... P40879 N/A
    914573 8x1u:B (2.21) BS01 OXL N/A GO:0005452 ... P40879 N/A
    914574 8x1u:B (2.21) BS02 LPE N/A GO:0005452 ... P40879 N/A
    914575 8x1u:B (2.21) BS03 LPE N/A GO:0005452 ... P40879 N/A
    914576 8x1u:B (2.21) BS04 LPE N/A GO:0005452 ... P40879 N/A
    914577 8x1u:B (2.21) BS05 LPE N/A GO:0005452 ... P40879 N/A
    914578 8x1w:A (2.1) BS01 HEM N/A GO:0004497 ... Q6WG30 N/A
    914579 8x1x:A (2.3) BS01 4OA N/A GO:0006508 ... P0DTD1 41527419
    914580 8x1x:A (2.3) BS02 4OA N/A GO:0006508 ... P0DTD1 41527419
    914581 8x1z:A (2.62) BS01 dna N/A GO:0003676 ... P12497 38977798
    914582 8x1z:A (2.62) BS02 MG N/A GO:0003676 ... P12497 38977798
    914583 8x1z:A (2.62) BS03 XTE N/A GO:0003676 ... P12497 38977798
    914584 8x1z:B (2.62) BS01 dna N/A GO:0003964 ... P12497 38977798
    914585 8x1z:C (2.62) BS01 dna N/A GO:0003676 ... P12497 38977798
    914586 8x1z:C (2.62) BS02 MG N/A GO:0003676 ... P12497 38977798
    914587 8x1z:C (2.62) BS03 XTE N/A GO:0003676 ... P12497 38977798
    914588 8x20:A (2.7) BS01 dna N/A GO:0003676 ... P12497 38977798
    914589 8x20:A (2.7) BS02 XTE N/A GO:0003676 ... P12497 38977798
    914590 8x20:B (2.7) BS01 dna N/A GO:0003964 ... P12497 38977798
    914591 8x20:C (2.7) BS01 dna N/A GO:0003676 ... P12497 38977798
    914592 8x20:C (2.7) BS02 XTE N/A GO:0003676 ... P12497 38977798
    914593 8x20:C (2.7) BS03 MG N/A GO:0003676 ... P12497 38977798
    914594 8x20:D (2.7) BS01 dna N/A GO:0003964 ... P12497 38977798
    914595 8x21:A (2.33) BS01 dna N/A GO:0003676 ... P12497 38977798
    914596 8x21:A (2.33) BS02 ET9 N/A GO:0003676 ... P12497 38977798
    914597 8x21:A (2.33) BS03 MG N/A GO:0003676 ... P12497 38977798
    914598 8x21:B (2.33) BS01 dna N/A GO:0003964 ... P12497 38977798
    914599 8x21:C (2.33) BS01 dna N/A GO:0003676 ... P12497 38977798
    914600 8x21:C (2.33) BS02 ET9 N/A GO:0003676 ... P12497 38977798

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).