SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    914801 8x3m:A (1.85) BS01 B8Z N/A GO:0000165 ... Q16539 38428305
    914802 8x3q:A (2.66) BS01 FRU N/A GO:0016757 ... Q8DIJ4 39357710
    914803 8x3q:A (2.66) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914804 8x3q:A (2.66) BS03 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914805 8x3q:A (2.66) BS04 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914806 8x3q:B (2.66) BS01 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914807 8x3q:B (2.66) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914808 8x3q:B (2.66) BS03 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914809 8x3q:C (2.66) BS01 FRU N/A GO:0016757 ... Q8DIJ4 39357710
    914810 8x3q:C (2.66) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914811 8x3q:C (2.66) BS03 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914812 8x3q:C (2.66) BS04 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914813 8x3q:D (2.66) BS01 FRU N/A GO:0016757 ... Q8DIJ4 39357710
    914814 8x3q:D (2.66) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914815 8x3q:D (2.66) BS03 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914816 8x3q:D (2.66) BS04 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914817 8x3r:A (1.76) BS01 peptide ? GO:0000122 ... P61964 38744853
    914818 8x3s:A (1.87) BS01 peptide ? GO:0000122 ... P61964 38744853
    914819 8x3u:A (2.58) BS01 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914820 8x3u:A (2.58) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914821 8x3u:A (2.58) BS03 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914822 8x3u:B (2.58) BS01 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914823 8x3u:B (2.58) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914824 8x3u:B (2.58) BS03 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914825 8x3u:C (2.58) BS01 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914826 8x3u:C (2.58) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914827 8x3u:C (2.58) BS03 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914828 8x3u:D (2.58) BS01 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914829 8x3u:D (2.58) BS02 GLC N/A GO:0016757 ... Q8DIJ4 39357710
    914830 8x3u:D (2.58) BS03 UDP N/A GO:0016757 ... Q8DIJ4 39357710
    914831 8x3v:A (2.9) BS01 ATP N/A GO:0003723 ... P03304 N/A
    914832 8x3v:B (2.9) BS01 ATP N/A GO:0003723 ... P03304 N/A
    914833 8x3w:A (2.01) BS01 ZN N/A GO:0000154 ... O59487 39146930
    914834 8x3w:A (2.01) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914835 8x3w:A (2.01) BS03 SO3 N/A GO:0000154 ... O59487 39146930
    914836 8x3w:A (2.01) BS04 SO3 N/A GO:0000154 ... O59487 39146930
    914837 8x3w:A (2.01) BS05 SO3 N/A GO:0000154 ... O59487 39146930
    914838 8x3w:A (2.01) BS06 ARG N/A GO:0000154 ... O59487 39146930
    914839 8x3w:B (2.01) BS01 SO3 N/A GO:0000154 ... O59487 39146930
    914840 8x3w:B (2.01) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914841 8x3w:B (2.01) BS03 SO3 N/A GO:0000154 ... O59487 39146930
    914842 8x3w:B (2.01) BS04 ARG N/A GO:0000154 ... O59487 39146930
    914843 8x3x:A (2.15) BS01 TPP N/A GO:0000287 ... N/A 40369129
    914844 8x3x:A (2.15) BS02 ADP N/A GO:0000287 ... N/A 40369129
    914845 8x3x:A (2.15) BS03 ENO N/A GO:0000287 ... N/A 40369129
    914846 8x3x:A (2.15) BS04 MG N/A GO:0000287 ... N/A 40369129
    914847 8x3x:A (2.15) BS05 TPP N/A GO:0000287 ... N/A 40369129
    914848 8x3x:A (2.15) BS06 ENO N/A GO:0000287 ... N/A 40369129
    914849 8x3x:B (2.15) BS01 TPP N/A GO:0000287 ... N/A 40369129
    914850 8x3x:B (2.15) BS02 ENO N/A GO:0000287 ... N/A 40369129
    914851 8x3x:B (2.15) BS03 TPP N/A GO:0000287 ... N/A 40369129
    914852 8x3x:B (2.15) BS04 ADP N/A GO:0000287 ... N/A 40369129
    914853 8x3x:B (2.15) BS05 ENO N/A GO:0000287 ... N/A 40369129
    914854 8x3x:B (2.15) BS06 MG N/A GO:0000287 ... N/A 40369129
    914855 8x3y:A (2.15) BS01 ADP N/A GO:0000287 ... N/A 40369129
    914856 8x3y:A (2.15) BS02 TPP N/A GO:0000287 ... N/A 40369129
    914857 8x3y:A (2.15) BS03 MG N/A GO:0000287 ... N/A 40369129
    914858 8x3y:A (2.15) BS04 TPP N/A GO:0000287 ... N/A 40369129
    914859 8x3y:B (2.15) BS01 TPP N/A GO:0000287 ... N/A 40369129
    914860 8x3y:B (2.15) BS02 ADP N/A GO:0000287 ... N/A 40369129
    914861 8x3y:B (2.15) BS03 TPP N/A GO:0000287 ... N/A 40369129
    914862 8x3y:B (2.15) BS04 MG N/A GO:0000287 ... N/A 40369129
    914863 8x3z:A (2.75) BS01 ADP N/A GO:0000287 ... A0A264W1B9 40369129
    914864 8x3z:A (2.75) BS02 TPP N/A GO:0000287 ... A0A264W1B9 40369129
    914865 8x3z:B (2.75) BS01 TPP N/A GO:0000287 ... A0A264W1B9 40369129
    914866 8x3z:B (2.75) BS02 ADP N/A GO:0000287 ... A0A264W1B9 40369129
    914867 8x3z:B (2.75) BS03 MG N/A GO:0000287 ... A0A264W1B9 40369129
    914868 8x41:A (2.35) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914869 8x41:A (2.35) BS02 ADN N/A GO:0000154 ... O59487 39146930
    914870 8x41:A (2.35) BS03 ZN N/A GO:0000154 ... O59487 39146930
    914871 8x41:A (2.35) BS04 SO3 N/A GO:0000154 ... O59487 39146930
    914872 8x41:A (2.35) BS05 SO3 N/A GO:0000154 ... O59487 39146930
    914873 8x41:B (2.35) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914874 8x41:B (2.35) BS02 ADN N/A GO:0000154 ... O59487 39146930
    914875 8x41:B (2.35) BS03 ZN N/A GO:0000154 ... O59487 39146930
    914876 8x41:B (2.35) BS04 SO3 N/A GO:0000154 ... O59487 39146930
    914877 8x41:B (2.35) BS05 SO3 N/A GO:0000154 ... O59487 39146930
    914878 8x42:A (2.097) BS01 CO N/A GO:0003868 ... P93836 N/A
    914879 8x42:A (2.097) BS02 YCR N/A GO:0003868 ... P93836 N/A
    914880 8x43:A (3.0) BS01 7Q0 ? GO:0005216 ... O43526 38167918
    914881 8x43:A (3.0) BS02 7Q0 ? GO:0005216 ... O43526 38167918
    914882 8x43:C (3.0) BS01 7Q0 ? GO:0005216 ... O43526 38167918
    914883 8x43:C (3.0) BS02 7Q0 ? GO:0005216 ... O43526 38167918
    914884 8x43:E (3.0) BS01 7Q0 ? GO:0005216 ... O43526 38167918
    914885 8x43:E (3.0) BS02 7Q0 ? GO:0005216 ... O43526 38167918
    914886 8x43:G (3.0) BS01 7Q0 ? GO:0005216 ... O43526 38167918
    914887 8x43:G (3.0) BS02 7Q0 ? GO:0005216 ... O43526 38167918
    914888 8x44:A (2.6) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914889 8x44:A (2.6) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914890 8x44:B (2.6) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914891 8x44:B (2.6) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914892 8x44:B (2.6) BS03 SO3 N/A GO:0000154 ... O59487 39146930
    914893 8x45:A (2.5) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914894 8x45:A (2.5) BS02 SO3 N/A GO:0000154 ... O59487 39146930
    914895 8x45:B (2.5) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914896 8x45:B (2.5) BS02 SO3 N/A GO:0000154 ... O59487 39146930
    914897 8x46:A (2.2) BS01 SFG N/A GO:0000154 ... O59487 39146930
    914898 8x46:A (2.2) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914899 8x46:A (2.2) BS03 ARG N/A GO:0000154 ... O59487 39146930
    914900 8x46:B (2.2) BS01 SFG N/A GO:0000154 ... O59487 39146930
    914901 8x46:B (2.2) BS02 SO3 N/A GO:0000154 ... O59487 39146930
    914902 8x46:B (2.2) BS03 ARG N/A GO:0000154 ... O59487 39146930
    914903 8x47:A (2.8) BS01 SAH N/A GO:0000154 ... O59487 39146930
    914904 8x47:A (2.8) BS02 SO3 N/A GO:0000154 ... O59487 39146930
    914905 8x47:A (2.8) BS03 ARG N/A GO:0000154 ... O59487 39146930
    914906 8x49:A (3.4) BS01 CA N/A GO:0003151 ... P11716 39994184
    914907 8x49:A (3.4) BS02 ZN N/A GO:0003151 ... P11716 39994184
    914908 8x49:B (3.4) BS01 CA N/A GO:0003151 ... P11716 39994184
    914909 8x49:B (3.4) BS02 ZN N/A GO:0003151 ... P11716 39994184
    914910 8x49:C (3.4) BS01 CA N/A GO:0003151 ... P11716 39994184
    914911 8x49:C (3.4) BS02 ZN N/A GO:0003151 ... P11716 39994184
    914912 8x49:D (3.4) BS01 CA N/A GO:0003151 ... P11716 39994184
    914913 8x49:D (3.4) BS02 ZN N/A GO:0003151 ... P11716 39994184
    914914 8x4a:A (3.8) BS01 CA N/A GO:0003151 ... P11716 39994184
    914915 8x4a:B (3.8) BS01 CA N/A GO:0003151 ... P11716 39994184
    914916 8x4a:C (3.8) BS01 CA N/A GO:0003151 ... P11716 39994184
    914917 8x4a:D (3.8) BS01 CA N/A GO:0003151 ... P11716 39994184
    914918 8x4b:A (4.2) BS01 CA N/A GO:0003151 ... P11716 39994184
    914919 8x4b:B (4.2) BS01 CA N/A GO:0003151 ... P11716 39994184
    914920 8x4b:C (4.2) BS01 CA N/A GO:0003151 ... P11716 39994184
    914921 8x4b:D (4.2) BS01 CA N/A GO:0003151 ... P11716 39994184
    914922 8x4c:A (3.8) BS01 ATP N/A GO:0003151 ... P11716 39994184
    914923 8x4c:A (3.8) BS02 CA N/A GO:0003151 ... P11716 39994184
    914924 8x4c:B (3.8) BS01 ATP N/A GO:0003151 ... P11716 39994184
    914925 8x4c:B (3.8) BS02 CA N/A GO:0003151 ... P11716 39994184
    914926 8x4c:C (3.8) BS01 ATP N/A GO:0003151 ... P11716 39994184
    914927 8x4c:C (3.8) BS02 CA N/A GO:0003151 ... P11716 39994184
    914928 8x4c:D (3.8) BS01 ATP N/A GO:0003151 ... P11716 39994184
    914929 8x4c:D (3.8) BS02 CA N/A GO:0003151 ... P11716 39994184
    914930 8x4d:A (3.9) BS01 CA N/A GO:0003151 ... P11716 39994184
    914931 8x4d:A (3.9) BS02 ATP N/A GO:0003151 ... P11716 39994184
    914932 8x4d:B (3.9) BS01 CA N/A GO:0003151 ... P11716 39994184
    914933 8x4d:B (3.9) BS02 ATP N/A GO:0003151 ... P11716 39994184
    914934 8x4d:C (3.9) BS01 CA N/A GO:0003151 ... P11716 39994184
    914935 8x4d:C (3.9) BS02 ATP N/A GO:0003151 ... P11716 39994184
    914936 8x4d:D (3.9) BS01 CA N/A GO:0003151 ... P11716 39994184
    914937 8x4d:D (3.9) BS02 ATP N/A GO:0003151 ... P11716 39994184
    914938 8x4e:A (3.3) BS01 ZN N/A GO:0003151 ... P11716 39994184
    914939 8x4e:A (3.3) BS02 CA N/A GO:0003151 ... P11716 39994184
    914940 8x4e:B (3.3) BS01 ZN N/A GO:0003151 ... P11716 39994184
    914941 8x4e:B (3.3) BS02 CA N/A GO:0003151 ... P11716 39994184
    914942 8x4e:C (3.3) BS01 ZN N/A GO:0003151 ... P11716 39994184
    914943 8x4e:C (3.3) BS02 CA N/A GO:0003151 ... P11716 39994184
    914944 8x4e:D (3.3) BS01 ZN N/A GO:0003151 ... P11716 39994184
    914945 8x4e:D (3.3) BS02 CA N/A GO:0003151 ... P11716 39994184
    914946 8x4i:A (3.3) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914947 8x4k:A (1.9) BS01 UDP N/A N/A Q5ZU30 N/A
    914948 8x4k:A (1.9) BS02 MG N/A N/A Q5ZU30 N/A
    914949 8x4k:A (1.9) BS03 BGC N/A N/A Q5ZU30 N/A
    914950 8x4l:A (2.6) BS01 ZN N/A GO:0000154 ... O59487 39146930
    914951 8x4l:A (2.6) BS02 SO3 N/A GO:0000154 ... O59487 39146930
    914952 8x4l:A (2.6) BS03 SO3 N/A GO:0000154 ... O59487 39146930
    914953 8x4l:A (2.6) BS04 ARG N/A GO:0000154 ... O59487 39146930
    914954 8x4l:B (2.6) BS01 SO3 N/A GO:0000154 ... O59487 39146930
    914955 8x4l:B (2.6) BS02 ZN N/A GO:0000154 ... O59487 39146930
    914956 8x4l:B (2.6) BS03 SO3 N/A GO:0000154 ... O59487 39146930
    914957 8x4l:B (2.6) BS04 ARG N/A GO:0000154 ... O59487 39146930
    914958 8x4m:A (1.79) BS01 UDP N/A N/A Q5ZU30 N/A
    914959 8x4m:A (1.79) BS02 MG N/A N/A Q5ZU30 N/A
    914960 8x4n:B (2.46) BS01 ITP N/A N/A Q5ZU30 N/A
    914961 8x4o:A (3.0) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914962 8x4o:B (3.0) BS01 MTA N/A GO:0000154 ... O59487 39146930
    914963 8x4p:A (2.6) BS01 SFG N/A GO:0000154 ... O59487 39146930
    914964 8x4p:B (2.6) BS01 SFG N/A GO:0000154 ... O59487 39146930
    914965 8x4r:A (2.18) BS01 PHE N/A GO:0000287 ... P14618 N/A
    914966 8x4r:B (2.18) BS01 PHE N/A GO:0000287 ... P14618 N/A
    914967 8x4r:D (2.18) BS01 PHE N/A GO:0000287 ... P14618 N/A
    914968 8x4s:A (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914969 8x4s:C (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914970 8x4s:E (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914971 8x4s:G (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914972 8x4s:I (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914973 8x4s:K (2.7) BS01 A1LWG N/A GO:0004609 ... P0DPA6 40121242
    914974 8x51:A (2.92) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914975 8x51:A (2.92) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914976 8x51:A (2.92) BS03 CA 3.1.-.- N/A J8H9C1 38471529
    914977 8x51:B (2.92) BS01 dna 3.1.-.- N/A J8H9C1 38471529
    914978 8x51:B (2.92) BS02 dna 3.1.-.- N/A J8H9C1 38471529
    914979 8x51:B (2.92) BS03 CA 3.1.-.- N/A J8H9C1 38471529
    914980 8x52:B (2.9) BS01 peptide 3.4.23.- GO:0000122 ... P49768 38843321
    914981 8x52:C (2.9) BS01 CLR ? GO:0000139 ... Q96BI3 38843321
    914982 8x53:B (3.0) BS01 peptide 3.4.23.- GO:0000122 ... P49768 38843321
    914983 8x53:C (3.0) BS01 CLR ? GO:0000139 ... Q96BI3 38843321
    914984 8x53:C (3.0) BS02 CLR ? GO:0000139 ... Q96BI3 38843321
    914985 8x54:B (2.9) BS01 peptide 3.4.23.- GO:0000122 ... P49768 38843321
    914986 8x54:C (2.9) BS01 CLR ? GO:0000139 ... Q96BI3 38843321
    914987 8x54:C (2.9) BS02 CLR ? GO:0000139 ... Q96BI3 38843321
    914988 8x54:C (2.9) BS03 CLR ? GO:0000139 ... Q96BI3 38843321
    914989 8x5b:A (2.84) BS01 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914990 8x5b:A (2.84) BS02 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914991 8x5b:A (2.84) BS03 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914992 8x5b:A (2.84) BS04 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914993 8x5b:F (2.84) BS01 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914994 8x5b:F (2.84) BS02 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914995 8x5b:F (2.84) BS03 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914996 8x5b:F (2.84) BS04 PO4 N/A GO:0016020 ... Q9UBH6 39169184
    914997 8x5c:A (1.788) BS01 CO N/A GO:0003868 ... P93836 N/A
    914998 8x5c:A (1.788) BS02 YCZ N/A GO:0003868 ... P93836 N/A
    914999 8x5d:G (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299
    915000 8x5d:H (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).