SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4566 4567 4568 4569 4570 4571 4572 4573 4574 4575 4576 4577 4578 4579 4580 4581 4582 4583 4584 4585 4586 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915001 8x5d:I (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299
    915002 8x5d:J (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299
    915003 8x5d:K (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299
    915004 8x5d:L (3.1) BS01 rna 3.1.-.- N/A P9WJF9 38218299
    915005 8x5d:N (3.1) BS01 rna ? N/A P9WJF5 38218299
    915006 8x5f:A (2.96) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915007 8x5f:A (2.96) BS02 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915008 8x5f:A (2.96) BS03 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915009 8x5f:A (2.96) BS04 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915010 8x5f:A (2.96) BS05 IHP N/A GO:0000822 ... Q9UBH6 39169184
    915011 8x5f:B (2.96) BS01 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915012 8x5f:B (2.96) BS02 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915013 8x5f:B (2.96) BS03 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915014 8x5f:B (2.96) BS04 PO4 N/A GO:0000822 ... Q9UBH6 39169184
    915015 8x5f:B (2.96) BS05 IHP N/A GO:0000822 ... Q9UBH6 39169184
    915016 8x5i:A (3.01) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915017 8x5i:A (3.01) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    915018 8x5i:B (3.01) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915019 8x5i:B (3.01) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    915020 8x5i:C (3.01) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915021 8x5i:D (3.01) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915022 8x5i:D (3.01) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    915023 8x5j:A (1.7) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 N/A
    915024 8x5j:B (1.7) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 N/A
    915025 8x5k:A (1.8) BS01 3YT 2.7.10.2 GO:0004672 ... P43405 N/A
    915026 8x5l:A (2.75) BS01 RKD 2.7.11.11 GO:0000287 ... P17612 N/A
    915027 8x5l:B (2.75) BS01 RKD 2.7.11.11 GO:0000287 ... P17612 N/A
    915028 8x5m:A (2.0) BS01 Y4O 2.7.11.24 GO:0004672 ... P45983 N/A
    915029 8x5n:A (2.8) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915030 8x5n:A (2.8) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    915031 8x5n:B (2.8) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915032 8x5n:C (2.8) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915033 8x5n:D (2.8) BS01 ATP 3.1.-.- N/A J8H9C1 38471529
    915034 8x5n:D (2.8) BS02 ATP 3.1.-.- N/A J8H9C1 38471529
    915035 8x5s:A (1.726) BS01 S3P N/A GO:0000287 ... P9WPY3 N/A
    915036 8x5t:A (1.6) BS01 AMP N/A GO:0000049 ... Q5SHZ2 40049414
    915037 8x5t:B (1.6) BS01 AMP N/A GO:0000049 ... Q5SHZ2 40049414
    915038 8x5v:A (2.0) BS01 rna N/A GO:0003676 ... N/A 38961195
    915039 8x5v:A (2.0) BS02 dna N/A GO:0003676 ... N/A 38961195
    915040 8x5v:A (2.0) BS03 dna N/A GO:0003676 ... N/A 38961195
    915041 8x5y:B (3.0) BS01 XB7 ? GO:0004930 ... P0ABE7
    P35367
    38167898
    915042 8x61:A (3.05) BS01 ATP ? GO:0000917 ... P0A9R7 38814940
    915043 8x61:A (3.05) BS02 ATP ? GO:0000917 ... P0A9R7 38814940
    915044 8x61:B (3.05) BS01 ATP ? GO:0000917 ... P0A9R7 38814940
    915045 8x61:B (3.05) BS02 ATP ? GO:0000917 ... P0A9R7 38814940
    915046 8x62:A (2.80339) BS01 YO0 N/A GO:0042981 ... Q07820 N/A
    915047 8x63:B (3.2) BS01 Y5E ? GO:0004930 ... P0ABE7
    P35367
    38167898
    915048 8x64:B (3.4) BS01 Y5R ? GO:0004930 ... P0ABE7
    P35367
    38167898
    915049 8x68:A (1.895) BS01 CO N/A GO:0003868 ... P93836 N/A
    915050 8x68:A (1.895) BS02 YD2 N/A GO:0003868 ... P93836 N/A
    915051 8x69:A (1.796) BS01 CO N/A GO:0003868 ... P93836 N/A
    915052 8x69:A (1.796) BS02 YDF N/A GO:0003868 ... P93836 N/A
    915053 8x6a:A (1.48) BS01 CO N/A GO:0003868 ... P93836 N/A
    915054 8x6a:A (1.48) BS02 YFC N/A GO:0003868 ... P93836 N/A
    915055 8x6c:A (1.796) BS01 CO N/A GO:0003868 ... P93836 N/A
    915056 8x6c:A (1.796) BS02 YFM N/A GO:0003868 ... P93836 N/A
    915057 8x6d:B (2.0) BS01 dna N/A N/A Q02457 N/A
    915058 8x6d:B (2.0) BS02 dna N/A N/A Q02457 N/A
    915059 8x6d:E (2.0) BS01 dna N/A N/A Q02457 N/A
    915060 8x6d:E (2.0) BS02 dna N/A N/A Q02457 N/A
    915061 8x6d:F (2.0) BS01 dna N/A N/A Q02457 N/A
    915062 8x6d:F (2.0) BS02 dna N/A N/A Q02457 N/A
    915063 8x6f:C (3.7) BS01 dna 2.7.7.6 GO:0000345 ... P47768 38844782
    915064 8x6f:D (3.7) BS01 dna 2.7.7.6 GO:0000287 ... Q2G0N5 38844782
    915065 8x6f:D (3.7) BS02 dna 2.7.7.6 GO:0000287 ... Q2G0N5 38844782
    915066 8x6f:E (3.7) BS01 dna ? GO:0000976 ... P0A0J0 38844782
    915067 8x6f:E (3.7) BS02 dna ? GO:0000976 ... P0A0J0 38844782
    915068 8x6g:D (3.3) BS01 dna 2.7.7.6 GO:0000287 ... Q2G0N5 38844782
    915069 8x6g:H (3.3) BS01 dna ? GO:0003677 ... A0A390QYZ6 38844782
    915070 8x6g:H (3.3) BS02 dna ? GO:0003677 ... A0A390QYZ6 38844782
    915071 8x6j:A () BS01 SAM N/A N/A N/A N/A
    915072 8x6l:A (3.16) BS01 SAM N/A GO:0000387 ... O14744 N/A
    915073 8x6l:A (3.16) BS02 YFU N/A GO:0000387 ... O14744 N/A
    915074 8x6l:C (3.16) BS01 SAM N/A GO:0000387 ... O14744 N/A
    915075 8x6l:C (3.16) BS02 YFU N/A GO:0000387 ... O14744 N/A
    915076 8x6l:E (3.16) BS01 SAM N/A GO:0000387 ... O14744 N/A
    915077 8x6l:E (3.16) BS02 YFU N/A GO:0000387 ... O14744 N/A
    915078 8x6l:F (3.16) BS01 SAM N/A GO:0000387 ... O14744 N/A
    915079 8x6l:F (3.16) BS02 YFU N/A GO:0000387 ... O14744 N/A
    915080 8x6m:A (2.0) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915081 8x6m:A (2.0) BS02 NAD 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915082 8x6m:A (2.0) BS03 GOL 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915083 8x6m:A (2.0) BS04 GOL 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915084 8x6m:B (2.0) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915085 8x6m:B (2.0) BS02 NAD 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 38483875
    915086 8x6q:A (2.39) BS01 Y8R N/A N/A Q8H620 39133859
    915087 8x6q:A (2.39) BS02 CO N/A N/A Q8H620 39133859
    915088 8x6q:A (2.39) BS03 AKG N/A N/A Q8H620 39133859
    915089 8x6q:B (2.39) BS01 Y8R N/A N/A Q8H620 39133859
    915090 8x6q:B (2.39) BS02 CO N/A N/A Q8H620 39133859
    915091 8x6q:B (2.39) BS03 AKG N/A N/A Q8H620 39133859
    915092 8x6q:C (2.39) BS01 Y8R N/A N/A Q8H620 39133859
    915093 8x6q:C (2.39) BS02 CO N/A N/A Q8H620 39133859
    915094 8x6q:C (2.39) BS03 AKG N/A N/A Q8H620 39133859
    915095 8x6q:D (2.39) BS01 Y8R N/A N/A Q8H620 39133859
    915096 8x6q:D (2.39) BS02 CO N/A N/A Q8H620 39133859
    915097 8x6q:D (2.39) BS03 AKG N/A N/A Q8H620 39133859
    915098 8x6r:A (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915099 8x6r:A (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915100 8x6r:B (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915101 8x6r:B (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915102 8x6r:C (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915103 8x6r:C (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915104 8x6r:D (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915105 8x6r:D (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915106 8x6r:E (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915107 8x6r:E (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915108 8x6r:F (1.85) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38176113
    915109 8x6r:F (1.85) BS02 Y9D 3.6.5.2 GO:0003924 ... P01116 38176113
    915110 8x6u:A (1.75) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915111 8x6u:A (1.75) BS02 Y7U N/A GO:0004126 ... A0ACD6B9U3 38492776
    915112 8x6u:B (1.75) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915113 8x6u:B (1.75) BS02 Y7U N/A GO:0004126 ... A0ACD6B9U3 38492776
    915114 8x6w:A (1.75) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915115 8x6w:B (1.75) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915116 8x6x:A (2.92) BS01 Y86 N/A GO:0005886 ... P9WJY5 39441632
    915117 8x6x:A (2.92) BS02 Y8F N/A GO:0005886 ... P9WJY5 39441632
    915118 8x6x:B (2.92) BS01 Y8F N/A GO:0005886 ... P9WJY5 39441632
    915119 8x6x:B (2.92) BS02 Y86 N/A GO:0005886 ... P9WJY5 39441632
    915120 8x6y:A (1.56) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915121 8x6y:B (1.56) BS01 ZN N/A GO:0004126 ... A0ACD6B9U3 38492776
    915122 8x6z:A (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915123 8x6z:A (2.95) BS02 MN N/A GO:0003824 ... N/A 39163210
    915124 8x6z:B (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915125 8x6z:B (2.95) BS02 MN N/A GO:0003824 ... N/A 39163210
    915126 8x6z:C (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915127 8x6z:D (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915128 8x6z:E (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915129 8x6z:E (2.95) BS02 MN N/A GO:0003824 ... N/A 39163210
    915130 8x6z:F (2.95) BS01 MN N/A GO:0003824 ... N/A 39163210
    915131 8x6z:F (2.95) BS02 MN N/A GO:0003824 ... N/A 39163210
    915132 8x71:B (1.58) BS01 YCC N/A GO:0016209 ... Q06830 N/A
    915133 8x72:A (2.2) BS01 ANP 2.7.11.21 GO:0004672 ... P53350 N/A
    915134 8x72:A (2.2) BS02 ZN 2.7.11.21 GO:0004672 ... P53350 N/A
    915135 8x73:B (1.61) BS01 YC0 N/A GO:0016209 ... Q06830 N/A
    915136 8x74:A (1.791) BS01 CO N/A N/A B6U9L0 39133859
    915137 8x74:A (1.791) BS02 AKG N/A N/A B6U9L0 39133859
    915138 8x74:A (1.791) BS03 92L N/A N/A B6U9L0 39133859
    915139 8x77:B (3.52) BS01 SAH 2.1.1.85 GO:0000785 ... Q86TU7 38755176
    915140 8x77:C (3.52) BS01 ZN ? GO:0000166 ... R9YK28 38755176
    915141 8x77:E (3.52) BS01 ZN ? GO:0000166 ... R9YK28 38755176
    915142 8x77:F (3.52) BS01 ZN ? GO:0000166 ... R9YK28 38755176
    915143 8x77:H (3.52) BS01 ZN ? GO:0000166 ... R9YK28 38755176
    915144 8x78:A (2.36) BS01 ZN N/A N/A N/A N/A
    915145 8x78:A (2.36) BS02 ZN N/A N/A N/A N/A
    915146 8x78:B (2.36) BS01 ZN N/A N/A N/A N/A
    915147 8x78:B (2.36) BS02 ZN N/A N/A N/A N/A
    915148 8x78:C (2.36) BS01 ZN N/A N/A N/A N/A
    915149 8x78:C (2.36) BS02 ZN N/A N/A N/A N/A
    915150 8x78:D (2.36) BS01 ZN N/A N/A N/A N/A
    915151 8x78:D (2.36) BS02 ZN N/A N/A N/A N/A
    915152 8x78:E (2.36) BS01 ZN N/A N/A N/A N/A
    915153 8x78:E (2.36) BS02 ZN N/A N/A N/A N/A
    915154 8x78:F (2.36) BS01 ZN N/A N/A N/A N/A
    915155 8x78:F (2.36) BS02 ZN N/A N/A N/A N/A
    915156 8x78:G (2.36) BS01 ZN N/A N/A N/A N/A
    915157 8x78:G (2.36) BS02 ZN N/A N/A N/A N/A
    915158 8x78:H (2.36) BS01 ZN N/A N/A N/A N/A
    915159 8x78:H (2.36) BS02 ZN N/A N/A N/A N/A
    915160 8x78:I (2.36) BS01 ZN N/A N/A N/A N/A
    915161 8x78:I (2.36) BS02 ZN N/A N/A N/A N/A
    915162 8x78:J (2.36) BS01 ZN N/A N/A N/A N/A
    915163 8x78:J (2.36) BS02 ZN N/A N/A N/A N/A
    915164 8x78:K (2.36) BS01 ZN N/A N/A N/A N/A
    915165 8x78:K (2.36) BS02 ZN N/A N/A N/A N/A
    915166 8x78:L (2.36) BS01 ZN N/A N/A N/A N/A
    915167 8x78:L (2.36) BS02 ZN N/A N/A N/A N/A
    915168 8x79:R (2.41) BS01 Y9Q ? GO:0004930 ... P43119 38335293
    915169 8x7a:R (2.56) BS01 Y9J ? GO:0004930 ... P43119 38335293
    915170 8x7b:A (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915171 8x7b:C (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915172 8x7b:C (3.0) BS02 TFX N/A GO:0000122 ... P37840 39172784
    915173 8x7b:C (3.0) BS03 TFX N/A GO:0000122 ... P37840 39172784
    915174 8x7b:C (3.0) BS04 TFX N/A GO:0000122 ... P37840 39172784
    915175 8x7b:D (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915176 8x7b:E (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915177 8x7b:E (3.0) BS02 TFX N/A GO:0000122 ... P37840 39172784
    915178 8x7b:E (3.0) BS03 TFX N/A GO:0000122 ... P37840 39172784
    915179 8x7b:E (3.0) BS04 TFX N/A GO:0000122 ... P37840 39172784
    915180 8x7b:F (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915181 8x7b:F (3.0) BS02 TFX N/A GO:0000122 ... P37840 39172784
    915182 8x7b:G (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915183 8x7b:G (3.0) BS02 TFX N/A GO:0000122 ... P37840 39172784
    915184 8x7b:G (3.0) BS03 TFX N/A GO:0000122 ... P37840 39172784
    915185 8x7b:G (3.0) BS04 TFX N/A GO:0000122 ... P37840 39172784
    915186 8x7b:I (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915187 8x7b:J (3.0) BS01 TFX N/A GO:0000122 ... P37840 39172784
    915188 8x7b:J (3.0) BS02 TFX N/A GO:0000122 ... P37840 39172784
    915189 8x7b:J (3.0) BS03 TFX N/A GO:0000122 ... P37840 39172784
    915190 8x7b:J (3.0) BS04 TFX N/A GO:0000122 ... P37840 39172784
    915191 8x7c:A (1.597) BS01 CO N/A N/A B6U9L0 39133859
    915192 8x7c:A (1.597) BS02 AKG N/A N/A B6U9L0 39133859
    915193 8x7c:B (1.597) BS01 CO N/A N/A B6U9L0 39133859
    915194 8x7c:B (1.597) BS02 AKG N/A N/A B6U9L0 39133859
    915195 8x7d:A (2.2) BS01 CO N/A N/A Q8H620 39133859
    915196 8x7d:A (2.2) BS02 AKG N/A N/A Q8H620 39133859
    915197 8x7d:A (2.2) BS03 AKG N/A N/A Q8H620 39133859
    915198 8x7d:B (2.2) BS01 CO N/A N/A Q8H620 39133859
    915199 8x7d:B (2.2) BS02 AKG N/A N/A Q8H620 39133859
    915200 8x7d:B (2.2) BS03 AKG N/A N/A Q8H620 39133859

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).