SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915001 8z11:r (2.74) BS05 CLA N/A N/A N/A 39642204
    915002 8z11:r (2.74) BS06 A86 N/A N/A N/A 39642204
    915003 8z12:A (2.238) BS01 FAD N/A N/A A0A7T1BYC5 N/A
    915004 8z13:A (2.505) BS01 NAP N/A N/A A0A7T1BYC5 N/A
    915005 8z13:A (2.505) BS02 FAD N/A N/A A0A7T1BYC5 N/A
    915006 8z14:A (2.638) BS01 A1D7R N/A N/A A0A7T1BYC5 N/A
    915007 8z14:A (2.638) BS02 FAD N/A N/A A0A7T1BYC5 N/A
    915008 8z15:A (2.552) BS01 FAD N/A N/A A0A7T1BYC5 N/A
    915009 8z15:A (2.552) BS02 NAP N/A N/A A0A7T1BYC5 N/A
    915010 8z15:A (2.552) BS03 A1D7V N/A N/A A0A7T1BYC5 N/A
    915011 8z16:A (2.419) BS01 FAD N/A N/A A0A7T1BYC5 N/A
    915012 8z16:A (2.419) BS02 NAP N/A N/A A0A7T1BYC5 N/A
    915013 8z16:A (2.419) BS03 A1D7R N/A N/A A0A7T1BYC5 N/A
    915014 8z17:A (2.43) BS01 FAD N/A N/A A0A7T1BYC5 N/A
    915015 8z17:A (2.43) BS02 NAP N/A N/A A0A7T1BYC5 N/A
    915016 8z17:A (2.43) BS03 A1D7R N/A N/A A0A7T1BYC5 N/A
    915017 8z1f:A (4.3) BS01 rna N/A GO:0003723 ... Q9BQ52 39494506
    915018 8z1f:A (4.3) BS02 ZN N/A GO:0003723 ... Q9BQ52 39494506
    915019 8z1f:A (4.3) BS03 ZN N/A GO:0003723 ... Q9BQ52 39494506
    915020 8z1g:A (3.7) BS01 rna N/A GO:0003723 ... Q9BQ52 39494506
    915021 8z1g:A (3.7) BS02 ZN N/A GO:0003723 ... Q9BQ52 39494506
    915022 8z1g:A (3.7) BS03 ZN N/A GO:0003723 ... Q9BQ52 39494506
    915023 8z1l:A (3.4) BS01 A1LX4 N/A GO:0003779 ... P23975 39048818
    915024 8z1p:A (2.83) BS01 rna N/A N/A P09436 39738040
    915025 8z1p:A (2.83) BS02 IL0 N/A N/A P09436 39738040
    915026 8z1r:A (1.82) BS01 MG N/A GO:0003824 ... G5EH03 N/A
    915027 8z1r:B (1.82) BS01 MG N/A GO:0003824 ... G5EH03 N/A
    915028 8z1v:C (3.16) BS01 SF4 N/A N/A P0AAG0 N/A
    915029 8z1v:D (3.16) BS01 SF4 N/A N/A P37313 N/A
    915030 8z1w:C (3.0) BS01 SF4 N/A N/A P0AAG0 N/A
    915031 8z1w:D (3.0) BS01 SF4 N/A N/A P37313 N/A
    915032 8z1w:D (3.0) BS02 AGS N/A N/A P37313 N/A
    915033 8z1x:C (3.2) BS01 SF4 N/A N/A P0AAG0 N/A
    915034 8z1x:D (3.2) BS01 ANP N/A N/A P37313 N/A
    915035 8z1x:D (3.2) BS02 SF4 N/A N/A P37313 N/A
    915036 8z1y:C (2.73) BS01 AGS N/A N/A P0AAG0 N/A
    915037 8z1y:C (2.73) BS02 SF4 N/A N/A P0AAG0 N/A
    915038 8z1y:C (2.73) BS03 AGS N/A N/A P0AAG0 N/A
    915039 8z1y:D (2.73) BS01 AGS N/A N/A P37313 N/A
    915040 8z1y:D (2.73) BS02 SF4 N/A N/A P37313 N/A
    915041 8z1y:D (2.73) BS03 AGS N/A N/A P37313 N/A
    915042 8z2g:A (1.9) BS01 C9C N/A N/A W0TJ64 39419144
    915043 8z2g:B (1.9) BS01 C9C N/A N/A W0TJ64 39419144
    915044 8z2h:A (1.8) BS01 A1L0N N/A N/A W0TJ64 39419144
    915045 8z2h:A (1.8) BS02 CA N/A N/A W0TJ64 39419144
    915046 8z2h:B (1.8) BS01 A1L0N N/A N/A W0TJ64 39419144
    915047 8z2h:B (1.8) BS02 CA N/A N/A W0TJ64 39419144
    915048 8z2i:A (1.38) BS01 A1L0L N/A N/A W0TJ64 39419144
    915049 8z2i:A (1.38) BS02 CA N/A N/A W0TJ64 39419144
    915050 8z2i:B (1.38) BS01 A1L0L N/A N/A W0TJ64 39419144
    915051 8z2i:B (1.38) BS02 CA N/A N/A W0TJ64 39419144
    915052 8z2j:A (1.89) BS01 A1L0M N/A N/A W0TJ64 39419144
    915053 8z2j:A (1.89) BS02 CA N/A N/A W0TJ64 39419144
    915054 8z2j:B (1.89) BS01 A1L0M N/A N/A W0TJ64 39419144
    915055 8z2j:B (1.89) BS02 CA N/A N/A W0TJ64 39419144
    915056 8z2k:A (2.2) BS01 A1L0O N/A N/A W0TJ64 39419144
    915057 8z2k:A (2.2) BS02 CA N/A N/A W0TJ64 39419144
    915058 8z2k:B (2.2) BS01 A1L0O N/A N/A W0TJ64 39419144
    915059 8z2k:B (2.2) BS02 A1L0O N/A N/A W0TJ64 39419144
    915060 8z2l:A (3.04) BS01 CA N/A N/A I3NX86 39109746
    915061 8z2l:A (3.04) BS02 MG N/A N/A I3NX86 39109746
    915062 8z2l:B (3.04) BS01 CA N/A N/A I3NX86 39109746
    915063 8z2l:B (3.04) BS02 MG N/A N/A I3NX86 39109746
    915064 8z2l:C (3.04) BS01 CA N/A N/A I3NX86 39109746
    915065 8z2l:C (3.04) BS02 MG N/A N/A I3NX86 39109746
    915066 8z2l:D (3.04) BS01 CA N/A N/A I3NX86 39109746
    915067 8z2l:D (3.04) BS02 MG N/A N/A I3NX86 39109746
    915068 8z2n:B (2.3) BS01 dna N/A GO:0016740 ... A0A0S0MVI5 39268585
    915069 8z2n:B (2.3) BS02 CA N/A GO:0016740 ... A0A0S0MVI5 39268585
    915070 8z2n:B (2.3) BS03 GLY N/A GO:0016740 ... A0A0S0MVI5 39268585
    915071 8z2n:CA00 (2.3) BS01 dna N/A GO:0016740 ... A0A0S0MVI5 39268585
    915072 8z2n:CA00 (2.3) BS02 dna N/A GO:0016740 ... A0A0S0MVI5 39268585
    915073 8z2n:CA00 (2.3) BS03 CA N/A GO:0016740 ... A0A0S0MVI5 39268585
    915074 8z2n:CA00 (2.3) BS04 GLY N/A GO:0016740 ... A0A0S0MVI5 39268585
    915075 8z2o:A (2.3) BS01 FAD N/A GO:0016829 ... A0A0S0N8M3 39268585
    915076 8z2q:A (2.99) BS01 CA N/A N/A I3NX86 39109746
    915077 8z2q:A (2.99) BS02 MG N/A N/A I3NX86 39109746
    915078 8z2q:B (2.99) BS01 CA N/A N/A I3NX86 39109746
    915079 8z2q:B (2.99) BS02 MG N/A N/A I3NX86 39109746
    915080 8z2q:C (2.99) BS01 CA N/A N/A I3NX86 39109746
    915081 8z2q:C (2.99) BS02 MG N/A N/A I3NX86 39109746
    915082 8z2q:D (2.99) BS01 CA N/A N/A I3NX86 39109746
    915083 8z2q:D (2.99) BS02 MG N/A N/A I3NX86 39109746
    915084 8z2q:E (2.99) BS01 CA N/A N/A I3NX86 39109746
    915085 8z2q:E (2.99) BS02 MG N/A N/A I3NX86 39109746
    915086 8z2q:F (2.99) BS01 CA N/A N/A I3NX86 39109746
    915087 8z2q:F (2.99) BS02 MG N/A N/A I3NX86 39109746
    915088 8z2q:G (2.99) BS01 CA N/A N/A I3NX86 39109746
    915089 8z2q:G (2.99) BS02 MG N/A N/A I3NX86 39109746
    915090 8z2q:H (2.99) BS01 CA N/A N/A I3NX86 39109746
    915091 8z2q:H (2.99) BS02 MG N/A N/A I3NX86 39109746
    915092 8z2r:A (2.53) BS01 CA N/A N/A I3NX86 39109746
    915093 8z2r:A (2.53) BS02 MG N/A N/A I3NX86 39109746
    915094 8z2r:B (2.53) BS01 CA N/A N/A I3NX86 39109746
    915095 8z2r:B (2.53) BS02 MG N/A N/A I3NX86 39109746
    915096 8z2r:C (2.53) BS01 CA N/A N/A I3NX86 39109746
    915097 8z2r:C (2.53) BS02 MG N/A N/A I3NX86 39109746
    915098 8z2r:D (2.53) BS01 CA N/A N/A I3NX86 39109746
    915099 8z2r:D (2.53) BS02 MG N/A N/A I3NX86 39109746
    915100 8z2r:E (2.53) BS01 CA N/A N/A I3NX86 39109746
    915101 8z2r:E (2.53) BS02 MG N/A N/A I3NX86 39109746
    915102 8z2r:F (2.53) BS01 CA N/A N/A I3NX86 39109746
    915103 8z2r:F (2.53) BS02 MG N/A N/A I3NX86 39109746
    915104 8z2r:G (2.53) BS01 CA N/A N/A I3NX86 39109746
    915105 8z2r:G (2.53) BS02 MG N/A N/A I3NX86 39109746
    915106 8z2r:H (2.53) BS01 CA N/A N/A I3NX86 39109746
    915107 8z2r:H (2.53) BS02 MG N/A N/A I3NX86 39109746
    915108 8z2s:A (2.32) BS01 CA N/A N/A I3NX86 39109746
    915109 8z2s:A (2.32) BS02 MG N/A N/A I3NX86 39109746
    915110 8z2s:B (2.32) BS01 CA N/A N/A I3NX86 39109746
    915111 8z2s:B (2.32) BS02 MG N/A N/A I3NX86 39109746
    915112 8z2s:C (2.32) BS01 CA N/A N/A I3NX86 39109746
    915113 8z2s:C (2.32) BS02 MG N/A N/A I3NX86 39109746
    915114 8z2s:D (2.32) BS01 CA N/A N/A I3NX86 39109746
    915115 8z2s:D (2.32) BS02 MG N/A N/A I3NX86 39109746
    915116 8z2s:E (2.32) BS01 CA N/A N/A I3NX86 39109746
    915117 8z2s:E (2.32) BS02 MG N/A N/A I3NX86 39109746
    915118 8z2s:F (2.32) BS01 CA N/A N/A I3NX86 39109746
    915119 8z2s:F (2.32) BS02 MG N/A N/A I3NX86 39109746
    915120 8z2s:G (2.32) BS01 CA N/A N/A I3NX86 39109746
    915121 8z2s:G (2.32) BS02 MG N/A N/A I3NX86 39109746
    915122 8z2s:H (2.32) BS01 CA N/A N/A I3NX86 39109746
    915123 8z2s:H (2.32) BS02 MG N/A N/A I3NX86 39109746
    915124 8z2t:A (2.83) BS01 CA N/A N/A I3NX86 39109746
    915125 8z2t:A (2.83) BS02 MG N/A N/A I3NX86 39109746
    915126 8z2t:A (2.83) BS03 VDM N/A N/A I3NX86 39109746
    915127 8z2t:B (2.83) BS01 CA N/A N/A I3NX86 39109746
    915128 8z2t:B (2.83) BS02 MG N/A N/A I3NX86 39109746
    915129 8z2t:B (2.83) BS03 VDM N/A N/A I3NX86 39109746
    915130 8z2t:C (2.83) BS01 CA N/A N/A I3NX86 39109746
    915131 8z2t:C (2.83) BS02 MG N/A N/A I3NX86 39109746
    915132 8z2t:C (2.83) BS03 VDM N/A N/A I3NX86 39109746
    915133 8z2t:D (2.83) BS01 CA N/A N/A I3NX86 39109746
    915134 8z2t:D (2.83) BS02 MG N/A N/A I3NX86 39109746
    915135 8z2t:D (2.83) BS03 VDM N/A N/A I3NX86 39109746
    915136 8z2u:A (2.9) BS01 CA N/A N/A I3NX86 39109746
    915137 8z2u:A (2.9) BS02 MG N/A N/A I3NX86 39109746
    915138 8z2u:A (2.9) BS03 VDM N/A N/A I3NX86 39109746
    915139 8z2u:B (2.9) BS01 CA N/A N/A I3NX86 39109746
    915140 8z2u:B (2.9) BS02 MG N/A N/A I3NX86 39109746
    915141 8z2u:B (2.9) BS03 VDM N/A N/A I3NX86 39109746
    915142 8z2u:C (2.9) BS01 CA N/A N/A I3NX86 39109746
    915143 8z2u:C (2.9) BS02 MG N/A N/A I3NX86 39109746
    915144 8z2u:C (2.9) BS03 VDM N/A N/A I3NX86 39109746
    915145 8z2u:D (2.9) BS01 CA N/A N/A I3NX86 39109746
    915146 8z2u:D (2.9) BS02 MG N/A N/A I3NX86 39109746
    915147 8z2u:D (2.9) BS03 VDM N/A N/A I3NX86 39109746
    915148 8z2x:A (1.73) BS01 BGC N/A N/A Q7Z9L3 39448541
    915149 8z2x:A (1.73) BS02 BGC N/A N/A Q7Z9L3 39448541
    915150 8z2x:A (1.73) BS03 BGC N/A N/A Q7Z9L3 39448541
    915151 8z2y:A (1.2) BS01 BGC N/A N/A Q7Z9L3 39448541
    915152 8z2y:A (1.2) BS02 BGC N/A N/A Q7Z9L3 39448541
    915153 8z30:A (2.3) BS01 TLF N/A N/A Q96EP0 39513479
    915154 8z30:B (2.3) BS01 TLF N/A N/A Q96EP0 39513479
    915155 8z30:C (2.3) BS01 TLF N/A N/A Q96EP0 39513479
    915156 8z36:A (2.63) BS01 SRE N/A N/A Q96EP0 39513479
    915157 8z36:B (2.63) BS01 SRE N/A N/A Q96EP0 39513479
    915158 8z36:C (2.63) BS01 SRE N/A N/A Q96EP0 39513479
    915159 8z38:A (2.17) BS01 CPI N/A GO:0003755 ... A0A4P7N8E2 N/A
    915160 8z38:B (2.17) BS01 CPI N/A GO:0003755 ... A0A4P7N8E2 N/A
    915161 8z3f:A (1.74) BS01 CA N/A N/A Q9Z309 39889697
    915162 8z3f:A (1.74) BS02 CA N/A N/A Q9Z309 39889697
    915163 8z3f:A (1.74) BS03 CA N/A N/A Q9Z309 39889697
    915164 8z3k:A (3.19) BS01 rna N/A GO:0004000 ... A0A6M1RED6 39666823
    915165 8z3k:B (3.19) BS01 rna N/A GO:0004000 ... A0A6M1RED6 39666823
    915166 8z3k:B (3.19) BS02 ZN N/A GO:0004000 ... A0A6M1RED6 39666823
    915167 8z3k:B (3.19) BS03 ATP N/A GO:0004000 ... A0A6M1RED6 39666823
    915168 8z3k:C (3.19) BS01 rna N/A GO:0004000 ... A0A6M1RED6 39666823
    915169 8z3k:C (3.19) BS02 ZN N/A GO:0004000 ... A0A6M1RED6 39666823
    915170 8z3k:C (3.19) BS03 ATP N/A GO:0004000 ... A0A6M1RED6 39666823
    915171 8z3k:D (3.19) BS01 rna N/A GO:0004000 ... A0A6M1RED6 39666823
    915172 8z3p:A (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915173 8z3p:A (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915174 8z3p:A (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915175 8z3p:B (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915176 8z3p:B (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915177 8z3p:B (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915178 8z3p:C (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915179 8z3p:C (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915180 8z3p:C (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915181 8z3p:D (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915182 8z3p:D (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915183 8z3p:D (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915184 8z3p:E (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915185 8z3p:E (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915186 8z3p:E (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915187 8z3p:F (3.4) BS01 rna N/A N/A A0A6M1RED6 39666823
    915188 8z3p:F (3.4) BS02 ATP N/A N/A A0A6M1RED6 39666823
    915189 8z3p:F (3.4) BS03 ZN N/A N/A A0A6M1RED6 39666823
    915190 8z3r:A (2.28) BS01 ZN N/A N/A A0A6M1RED6 39666823
    915191 8z3r:A (2.28) BS02 LQJ N/A N/A A0A6M1RED6 39666823
    915192 8z3r:A (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915193 8z3r:B (2.28) BS01 LQJ N/A N/A A0A6M1RED6 39666823
    915194 8z3r:B (2.28) BS02 ZN N/A N/A A0A6M1RED6 39666823
    915195 8z3r:B (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915196 8z3r:C (2.28) BS01 ZN N/A N/A A0A6M1RED6 39666823
    915197 8z3r:C (2.28) BS02 LQJ N/A N/A A0A6M1RED6 39666823
    915198 8z3r:C (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915199 8z3r:D (2.28) BS01 LQJ N/A N/A A0A6M1RED6 39666823
    915200 8z3r:D (2.28) BS02 ZN N/A N/A A0A6M1RED6 39666823

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).