SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915201 8z3r:D (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915202 8z3r:E (2.28) BS01 ZN N/A N/A A0A6M1RED6 39666823
    915203 8z3r:E (2.28) BS02 LQJ N/A N/A A0A6M1RED6 39666823
    915204 8z3r:E (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915205 8z3r:F (2.28) BS01 ZN N/A N/A A0A6M1RED6 39666823
    915206 8z3r:F (2.28) BS02 LQJ N/A N/A A0A6M1RED6 39666823
    915207 8z3r:F (2.28) BS03 LQJ N/A N/A A0A6M1RED6 39666823
    915208 8z3s:A (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    915209 8z3s:A (3.9) BS02 Y01 N/A GO:0001666 ... Q12791 39089879
    915210 8z3s:A (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    915211 8z3s:A (3.9) BS04 CA N/A GO:0001666 ... Q12791 39089879
    915212 8z3s:B (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    915213 8z3s:B (3.9) BS02 CA N/A GO:0001666 ... Q12791 39089879
    915214 8z3s:B (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    915215 8z3s:C (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    915216 8z3s:C (3.9) BS02 CA N/A GO:0001666 ... Q12791 39089879
    915217 8z3s:C (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    915218 8z3s:D (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    915219 8z3s:D (3.9) BS02 Y01 N/A GO:0001666 ... Q12791 39089879
    915220 8z3s:D (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    915221 8z3s:D (3.9) BS04 CA N/A GO:0001666 ... Q12791 39089879
    915222 8z47:A (1.86) BS01 GLA N/A N/A D6CYU7 N/A
    915223 8z48:A (1.94) BS01 MBG N/A N/A D6CYU7 N/A
    915224 8z48:B (1.94) BS01 MBG N/A N/A D6CYU7 N/A
    915225 8z48:C (1.94) BS01 MBG N/A N/A D6CYU7 N/A
    915226 8z48:D (1.94) BS01 MBG N/A N/A D6CYU7 N/A
    915227 8z4b:B (2.5) BS01 peptide ? GO:0005179 ... P01308 N/A
    915228 8z4b:D (2.5) BS01 peptide ? GO:0005179 ... P01308 N/A
    915229 8z4e:A (3.0) BS01 CA N/A N/A A0A0K0YAP8 39402031
    915230 8z4j:B (2.97) BS01 rna N/A N/A N/A 39143216
    915231 8z4j:B (2.97) BS02 ZN N/A N/A N/A 39143216
    915232 8z4j:C (2.97) BS01 rna N/A N/A N/A 39143216
    915233 8z4j:C (2.97) BS02 rna N/A N/A N/A 39143216
    915234 8z4j:C (2.97) BS03 ZN N/A N/A N/A 39143216
    915235 8z4j:D (2.97) BS01 rna N/A N/A N/A 39143216
    915236 8z4j:D (2.97) BS02 rna N/A N/A N/A 39143216
    915237 8z4j:D (2.97) BS03 ZN N/A N/A N/A 39143216
    915238 8z4j:E (2.97) BS01 rna N/A N/A N/A 39143216
    915239 8z4j:E (2.97) BS02 rna N/A N/A N/A 39143216
    915240 8z4j:E (2.97) BS03 ZN N/A N/A N/A 39143216
    915241 8z4j:F (2.97) BS01 rna N/A N/A N/A 39143216
    915242 8z4j:F (2.97) BS02 rna N/A N/A N/A 39143216
    915243 8z4j:G (2.97) BS01 rna N/A N/A N/A 39143216
    915244 8z4j:H (2.97) BS01 rna N/A N/A N/A 39143216
    915245 8z4j:H (2.97) BS02 ZN N/A N/A N/A 39143216
    915246 8z4j:I (2.97) BS01 rna N/A N/A N/A 39143216
    915247 8z4j:J (2.97) BS01 rna N/A N/A N/A 39143216
    915248 8z4j:J (2.97) BS02 rna N/A N/A N/A 39143216
    915249 8z4j:K (2.97) BS01 rna N/A N/A N/A 39143216
    915250 8z4j:L (2.97) BS01 rna N/A N/A N/A 39143216
    915251 8z4l:A (2.85) BS01 rna N/A N/A N/A 39143216
    915252 8z4l:A (2.85) BS02 rna N/A N/A N/A 39143216
    915253 8z4l:A (2.85) BS03 ZN N/A N/A N/A 39143216
    915254 8z4l:B (2.85) BS01 rna N/A N/A N/A 39143216
    915255 8z4l:B (2.85) BS02 rna N/A N/A N/A 39143216
    915256 8z4l:B (2.85) BS03 ZN N/A N/A N/A 39143216
    915257 8z4l:C (2.85) BS01 rna N/A N/A N/A 39143216
    915258 8z4l:C (2.85) BS02 rna N/A N/A N/A 39143216
    915259 8z4l:C (2.85) BS03 ZN N/A N/A N/A 39143216
    915260 8z4l:D (2.85) BS01 rna N/A N/A N/A 39143216
    915261 8z4l:D (2.85) BS02 rna N/A N/A N/A 39143216
    915262 8z4l:E (2.85) BS01 rna N/A N/A N/A 39143216
    915263 8z4l:E (2.85) BS02 rna N/A N/A N/A 39143216
    915264 8z4l:E (2.85) BS03 ZN N/A N/A N/A 39143216
    915265 8z4l:F (2.85) BS01 rna N/A N/A N/A 39143216
    915266 8z4l:F (2.85) BS02 rna N/A N/A N/A 39143216
    915267 8z4l:F (2.85) BS03 ZN N/A N/A N/A 39143216
    915268 8z4l:G (2.85) BS01 rna N/A N/A N/A 39143216
    915269 8z4l:G (2.85) BS02 ZN N/A N/A N/A 39143216
    915270 8z4l:H (2.85) BS01 rna N/A N/A N/A 39143216
    915271 8z4l:H (2.85) BS02 ZN N/A N/A N/A 39143216
    915272 8z4l:I (2.85) BS01 rna N/A N/A N/A 39143216
    915273 8z4l:J (2.85) BS01 rna N/A N/A N/A 39143216
    915274 8z4l:J (2.85) BS02 rna N/A N/A N/A 39143216
    915275 8z4l:J (2.85) BS03 ZN N/A N/A N/A 39143216
    915276 8z4l:K (2.85) BS01 rna N/A N/A N/A 39143216
    915277 8z4l:L (2.85) BS01 rna N/A N/A N/A 39143216
    915278 8z4q:A (1.68) BS01 FE N/A GO:0016491 ... A0A1V6NH53 39227380
    915279 8z4r:A (1.81) BS01 A1D7Y N/A GO:0016491 ... N/A 39227380
    915280 8z4r:A (1.81) BS02 FE N/A GO:0016491 ... N/A 39227380
    915281 8z4s:A (1.93) BS01 A1D7Z N/A GO:0016491 ... N/A 39227380
    915282 8z4s:A (1.93) BS02 FE N/A GO:0016491 ... N/A 39227380
    915283 8z4v:A (1.7) BS01 BCL N/A N/A N/A 39694041
    915284 8z4v:A (1.7) BS02 BCL N/A N/A N/A 39694041
    915285 8z4v:A (1.7) BS03 A1L0S N/A N/A N/A 39694041
    915286 8z4v:A (1.7) BS04 BCL N/A N/A N/A 39694041
    915287 8z4v:A (1.7) BS05 BCL N/A N/A N/A 39694041
    915288 8z4v:C (1.7) BS01 BCL N/A N/A N/A 39694041
    915289 8z4v:C (1.7) BS02 BCL N/A N/A N/A 39694041
    915290 8z4v:C (1.7) BS03 A1L0S N/A N/A N/A 39694041
    915291 8z4v:C (1.7) BS04 BCL N/A N/A N/A 39694041
    915292 8z4v:C (1.7) BS05 BCL N/A N/A N/A 39694041
    915293 8z4v:C (1.7) BS06 A1L0S N/A N/A N/A 39694041
    915294 8z4v:D (1.7) BS01 BCL N/A N/A N/A 39694041
    915295 8z4v:D (1.7) BS02 BCL N/A N/A N/A 39694041
    915296 8z4v:D (1.7) BS03 BCL N/A N/A N/A 39694041
    915297 8z4v:D (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915298 8z4v:D (1.7) BS05 BCL N/A N/A N/A 39694041
    915299 8z4v:E (1.7) BS01 BCL N/A N/A N/A 39694041
    915300 8z4v:E (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915301 8z4v:E (1.7) BS03 BCL N/A N/A N/A 39694041
    915302 8z4v:E (1.7) BS04 BCL N/A N/A N/A 39694041
    915303 8z4v:E (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915304 8z4v:E (1.7) BS06 BCL N/A N/A N/A 39694041
    915305 8z4v:G (1.7) BS01 BCL N/A N/A N/A 39694041
    915306 8z4v:G (1.7) BS02 BCL N/A N/A N/A 39694041
    915307 8z4v:G (1.7) BS03 BCL N/A N/A N/A 39694041
    915308 8z4v:G (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915309 8z4v:G (1.7) BS05 BCL N/A N/A N/A 39694041
    915310 8z4v:H (1.7) BS01 BCL N/A N/A N/A 39694041
    915311 8z4v:H (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915312 8z4v:H (1.7) BS03 BCL N/A N/A N/A 39694041
    915313 8z4v:H (1.7) BS04 BCL N/A N/A N/A 39694041
    915314 8z4v:H (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915315 8z4v:H (1.7) BS06 BCL N/A N/A N/A 39694041
    915316 8z4v:J (1.7) BS01 BCL N/A N/A N/A 39694041
    915317 8z4v:J (1.7) BS02 BCL N/A N/A N/A 39694041
    915318 8z4v:J (1.7) BS03 BCL N/A N/A N/A 39694041
    915319 8z4v:J (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915320 8z4v:J (1.7) BS05 BCL N/A N/A N/A 39694041
    915321 8z4v:K (1.7) BS01 BCL N/A N/A N/A 39694041
    915322 8z4v:K (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915323 8z4v:K (1.7) BS03 BCL N/A N/A N/A 39694041
    915324 8z4v:K (1.7) BS04 BCL N/A N/A N/A 39694041
    915325 8z4v:K (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915326 8z4v:K (1.7) BS06 BCL N/A N/A N/A 39694041
    915327 8z4v:M (1.7) BS01 BCL N/A N/A N/A 39694041
    915328 8z4v:M (1.7) BS02 BCL N/A N/A N/A 39694041
    915329 8z4v:M (1.7) BS03 BCL N/A N/A N/A 39694041
    915330 8z4v:M (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915331 8z4v:M (1.7) BS05 BCL N/A N/A N/A 39694041
    915332 8z4v:N (1.7) BS01 BCL N/A N/A N/A 39694041
    915333 8z4v:N (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915334 8z4v:N (1.7) BS03 BCL N/A N/A N/A 39694041
    915335 8z4v:N (1.7) BS04 BCL N/A N/A N/A 39694041
    915336 8z4v:N (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915337 8z4v:N (1.7) BS06 BCL N/A N/A N/A 39694041
    915338 8z4v:P (1.7) BS01 BCL N/A N/A N/A 39694041
    915339 8z4v:P (1.7) BS02 BCL N/A N/A N/A 39694041
    915340 8z4v:P (1.7) BS03 BCL N/A N/A N/A 39694041
    915341 8z4v:P (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915342 8z4v:P (1.7) BS05 BCL N/A N/A N/A 39694041
    915343 8z4v:Q (1.7) BS01 BCL N/A N/A N/A 39694041
    915344 8z4v:Q (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915345 8z4v:Q (1.7) BS03 BCL N/A N/A N/A 39694041
    915346 8z4v:Q (1.7) BS04 BCL N/A N/A N/A 39694041
    915347 8z4v:Q (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915348 8z4v:Q (1.7) BS06 BCL N/A N/A N/A 39694041
    915349 8z4v:S (1.7) BS01 BCL N/A N/A N/A 39694041
    915350 8z4v:S (1.7) BS02 BCL N/A N/A N/A 39694041
    915351 8z4v:S (1.7) BS03 BCL N/A N/A N/A 39694041
    915352 8z4v:S (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915353 8z4v:S (1.7) BS05 BCL N/A N/A N/A 39694041
    915354 8z4v:T (1.7) BS01 BCL N/A N/A N/A 39694041
    915355 8z4v:T (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915356 8z4v:T (1.7) BS03 BCL N/A N/A N/A 39694041
    915357 8z4v:T (1.7) BS04 BCL N/A N/A N/A 39694041
    915358 8z4v:T (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915359 8z4v:T (1.7) BS06 BCL N/A N/A N/A 39694041
    915360 8z4v:V (1.7) BS01 BCL N/A N/A N/A 39694041
    915361 8z4v:V (1.7) BS02 BCL N/A N/A N/A 39694041
    915362 8z4v:V (1.7) BS03 BCL N/A N/A N/A 39694041
    915363 8z4v:V (1.7) BS04 A1L0S N/A N/A N/A 39694041
    915364 8z4v:V (1.7) BS05 BCL N/A N/A N/A 39694041
    915365 8z4v:W (1.7) BS01 BCL N/A N/A N/A 39694041
    915366 8z4v:W (1.7) BS02 A1L0S N/A N/A N/A 39694041
    915367 8z4v:W (1.7) BS03 BCL N/A N/A N/A 39694041
    915368 8z4v:W (1.7) BS04 BCL N/A N/A N/A 39694041
    915369 8z4v:W (1.7) BS05 A1L0S N/A N/A N/A 39694041
    915370 8z4v:W (1.7) BS06 BCL N/A N/A N/A 39694041
    915371 8z54:A (1.45) BS01 peptide N/A N/A Q9NXA8 39031546
    915372 8z54:A (1.45) BS02 ZN N/A N/A Q9NXA8 39031546
    915373 8z55:A (1.83) BS01 peptide N/A N/A Q9NXA8 39031546
    915374 8z55:A (1.83) BS02 ADP N/A N/A Q9NXA8 39031546
    915375 8z55:A (1.83) BS03 ZN N/A N/A Q9NXA8 39031546
    915376 8z56:A (1.806) BS01 peptide N/A N/A Q9NXA8 39031546
    915377 8z56:A (1.806) BS02 ZN N/A N/A Q9NXA8 39031546
    915378 8z57:A (1.96) BS01 peptide N/A N/A Q9NXA8 39031546
    915379 8z57:A (1.96) BS02 ZN N/A N/A Q9NXA8 39031546
    915380 8z57:A (1.96) BS03 ADP N/A N/A Q9NXA8 39031546
    915381 8z58:A (2.405) BS01 peptide N/A N/A Q9NXA8 39031546
    915382 8z58:A (2.405) BS02 ZN N/A N/A Q9NXA8 39031546
    915383 8z59:A (2.58) BS01 CU N/A N/A A0A2K2VPI4 N/A
    915384 8z59:A (2.58) BS02 CU N/A N/A A0A2K2VPI4 N/A
    915385 8z59:A (2.58) BS03 CU N/A N/A A0A2K2VPI4 N/A
    915386 8z59:A (2.58) BS04 CU N/A N/A A0A2K2VPI4 N/A
    915387 8z59:B (2.58) BS01 CU N/A N/A A0A2K2VPI4 N/A
    915388 8z59:B (2.58) BS02 CU N/A N/A A0A2K2VPI4 N/A
    915389 8z59:B (2.58) BS03 CU N/A N/A A0A2K2VPI4 N/A
    915390 8z59:B (2.58) BS04 CU N/A N/A A0A2K2VPI4 N/A
    915391 8z59:C (2.58) BS01 CU N/A N/A A0A2K2VPI4 N/A
    915392 8z59:C (2.58) BS02 CU N/A N/A A0A2K2VPI4 N/A
    915393 8z59:C (2.58) BS03 CU N/A N/A A0A2K2VPI4 N/A
    915394 8z59:C (2.58) BS04 CU N/A N/A A0A2K2VPI4 N/A
    915395 8z59:D (2.58) BS01 CU N/A N/A A0A2K2VPI4 N/A
    915396 8z59:D (2.58) BS02 CU N/A N/A A0A2K2VPI4 N/A
    915397 8z59:D (2.58) BS03 CU N/A N/A A0A2K2VPI4 N/A
    915398 8z59:D (2.58) BS04 CU N/A N/A A0A2K2VPI4 N/A
    915399 8z59:E (2.58) BS01 CU N/A N/A A0A2K2VPI4 N/A
    915400 8z59:E (2.58) BS02 CU N/A N/A A0A2K2VPI4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).