SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915201 8x7e:A (2.3) BS01 peptide N/A GO:0003677 ... P51449 38170624
    915202 8x7e:A (2.3) BS02 YAL N/A GO:0003677 ... P51449 38170624
    915203 8x7e:C (2.3) BS01 peptide N/A GO:0003677 ... P51449 38170624
    915204 8x7e:C (2.3) BS02 YAL N/A GO:0003677 ... P51449 38170624
    915205 8x7e:E (2.3) BS01 peptide N/A GO:0003677 ... P51449 38170624
    915206 8x7e:E (2.3) BS02 YAL N/A GO:0003677 ... P51449 38170624
    915207 8x7e:G (2.3) BS01 peptide N/A GO:0003677 ... P51449 38170624
    915208 8x7e:G (2.3) BS02 YAL N/A GO:0003677 ... P51449 38170624
    915209 8x7f:A (2.66) BS01 NAD N/A GO:0000309 ... P27278 N/A
    915210 8x7f:D (2.66) BS01 NAD N/A GO:0000309 ... P27278 N/A
    915211 8x7f:G (2.66) BS01 NAD N/A GO:0000309 ... P27278 N/A
    915212 8x7f:J (2.66) BS01 NAD N/A GO:0000309 ... P27278 N/A
    915213 8x7g:A (2.7) BS01 YAX N/A N/A Q8IVV7 40295770
    915214 8x7g:B (2.7) BS01 YAX N/A N/A O60885 40295770
    915215 8x7h:A (2.9) BS01 YBI N/A N/A Q8IVV7 40295770
    915216 8x7h:B (2.9) BS01 YBI N/A N/A O60885 40295770
    915217 8x7h:C (2.9) BS01 YBI N/A N/A Q8IVV7 40295770
    915218 8x7h:D (2.9) BS01 YBI N/A N/A O60885 40295770
    915219 8x7h:E (2.9) BS01 YBI N/A N/A Q8IVV7 40295770
    915220 8x7h:F (2.9) BS01 YBI N/A N/A O60885 40295770
    915221 8x7h:G (2.9) BS01 YBI N/A N/A Q8IVV7 40295770
    915222 8x7h:H (2.9) BS01 YBI N/A N/A O60885 40295770
    915223 8x7i:A (3.27) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915224 8x7i:A (3.27) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915225 8x7i:B (3.27) BS01 dna N/A GO:0003677 ... P62805 N/A
    915226 8x7i:B (3.27) BS02 dna N/A GO:0003677 ... P62805 N/A
    915227 8x7i:C (3.27) BS01 dna N/A GO:0000786 ... P04908 N/A
    915228 8x7i:C (3.27) BS02 dna N/A GO:0000786 ... P04908 N/A
    915229 8x7i:D (3.27) BS01 dna N/A GO:0000786 ... O60814 N/A
    915230 8x7i:D (3.27) BS02 dna N/A GO:0000786 ... O60814 N/A
    915231 8x7i:E (3.27) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915232 8x7i:E (3.27) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915233 8x7i:F (3.27) BS01 dna N/A GO:0003677 ... P62805 N/A
    915234 8x7i:F (3.27) BS02 dna N/A GO:0003677 ... P62805 N/A
    915235 8x7i:G (3.27) BS01 dna N/A GO:0000786 ... P04908 N/A
    915236 8x7i:G (3.27) BS02 dna N/A GO:0000786 ... P04908 N/A
    915237 8x7i:H (3.27) BS01 dna N/A GO:0000786 ... O60814 N/A
    915238 8x7i:H (3.27) BS02 dna N/A GO:0000786 ... O60814 N/A
    915239 8x7i:L (3.27) BS01 ZN N/A N/A Q8IYW5 N/A
    915240 8x7i:L (3.27) BS02 ZN N/A N/A Q8IYW5 N/A
    915241 8x7j:A (3.39) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915242 8x7j:A (3.39) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915243 8x7j:B (3.39) BS01 dna N/A GO:0003677 ... P62805 N/A
    915244 8x7j:B (3.39) BS02 dna N/A GO:0003677 ... P62805 N/A
    915245 8x7j:C (3.39) BS01 dna N/A GO:0000786 ... P04908 N/A
    915246 8x7j:C (3.39) BS02 dna N/A GO:0000786 ... P04908 N/A
    915247 8x7j:D (3.39) BS01 dna N/A GO:0000786 ... O60814 N/A
    915248 8x7j:D (3.39) BS02 dna N/A GO:0000786 ... O60814 N/A
    915249 8x7j:E (3.39) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915250 8x7j:E (3.39) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915251 8x7j:F (3.39) BS01 dna N/A GO:0003677 ... P62805 N/A
    915252 8x7j:F (3.39) BS02 dna N/A GO:0003677 ... P62805 N/A
    915253 8x7j:G (3.39) BS01 dna N/A GO:0000786 ... P04908 N/A
    915254 8x7j:G (3.39) BS02 dna N/A GO:0000786 ... P04908 N/A
    915255 8x7j:H (3.39) BS01 dna N/A GO:0000786 ... O60814 N/A
    915256 8x7j:L (3.39) BS01 ZN N/A N/A Q8IYW5 N/A
    915257 8x7j:L (3.39) BS02 ZN N/A N/A Q8IYW5 N/A
    915258 8x7k:A (3.27) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915259 8x7k:A (3.27) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915260 8x7k:B (3.27) BS01 dna N/A GO:0003677 ... P62805 N/A
    915261 8x7k:B (3.27) BS02 dna N/A GO:0003677 ... P62805 N/A
    915262 8x7k:C (3.27) BS01 dna N/A GO:0000786 ... P04908 N/A
    915263 8x7k:C (3.27) BS02 dna N/A GO:0000786 ... P04908 N/A
    915264 8x7k:D (3.27) BS01 dna N/A GO:0000786 ... O60814 N/A
    915265 8x7k:D (3.27) BS02 dna N/A GO:0000786 ... O60814 N/A
    915266 8x7k:E (3.27) BS01 dna N/A GO:0000786 ... Q71DI3 N/A
    915267 8x7k:E (3.27) BS02 dna N/A GO:0000786 ... Q71DI3 N/A
    915268 8x7k:F (3.27) BS01 dna N/A GO:0003677 ... P62805 N/A
    915269 8x7k:F (3.27) BS02 dna N/A GO:0003677 ... P62805 N/A
    915270 8x7k:G (3.27) BS01 dna N/A GO:0000786 ... P04908 N/A
    915271 8x7k:G (3.27) BS02 dna N/A GO:0000786 ... P04908 N/A
    915272 8x7k:H (3.27) BS01 dna N/A GO:0000786 ... O60814 N/A
    915273 8x7k:H (3.27) BS02 dna N/A GO:0000786 ... O60814 N/A
    915274 8x7k:L (3.27) BS01 ZN N/A N/A Q8IYW5 N/A
    915275 8x7k:L (3.27) BS02 ZN N/A N/A Q8IYW5 N/A
    915276 8x7l:F (3.4) BS01 IZ8 N/A GO:0000122 ... P37840 39172784
    915277 8x7l:H (3.4) BS01 IZ8 N/A GO:0000122 ... P37840 39172784
    915278 8x7l:I (3.4) BS01 IZ8 N/A GO:0000122 ... P37840 39172784
    915279 8x7m:A (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915280 8x7m:B (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915281 8x7m:C (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915282 8x7m:C (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915283 8x7m:D (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915284 8x7m:E (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915285 8x7m:E (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915286 8x7m:F (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915287 8x7m:F (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915288 8x7m:F (3.0) BS03 YA9 N/A GO:0000122 ... P37840 39172784
    915289 8x7m:G (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915290 8x7m:G (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915291 8x7m:G (3.0) BS03 YA9 N/A GO:0000122 ... P37840 39172784
    915292 8x7m:H (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915293 8x7m:H (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915294 8x7m:I (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915295 8x7m:I (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915296 8x7m:I (3.0) BS03 YA9 N/A GO:0000122 ... P37840 39172784
    915297 8x7m:J (3.0) BS01 YA9 N/A GO:0000122 ... P37840 39172784
    915298 8x7m:J (3.0) BS02 YA9 N/A GO:0000122 ... P37840 39172784
    915299 8x7m:J (3.0) BS03 YA9 N/A GO:0000122 ... P37840 39172784
    915300 8x7m:J (3.0) BS04 YA9 N/A GO:0000122 ... P37840 39172784
    915301 8x7o:A (3.5) BS01 IZV N/A GO:0000122 ... P37840 39172784
    915302 8x7o:A (3.5) BS02 IZV N/A GO:0000122 ... P37840 39172784
    915303 8x7o:C (3.5) BS01 IZV N/A GO:0000122 ... P37840 39172784
    915304 8x7o:C (3.5) BS02 IZV N/A GO:0000122 ... P37840 39172784
    915305 8x7o:D (3.5) BS01 IZV N/A GO:0000122 ... P37840 39172784
    915306 8x7o:D (3.5) BS02 IZV N/A GO:0000122 ... P37840 39172784
    915307 8x7o:E (3.5) BS01 IZV N/A GO:0000122 ... P37840 39172784
    915308 8x7o:E (3.5) BS02 IZV N/A GO:0000122 ... P37840 39172784
    915309 8x7o:G (3.5) BS01 IZV N/A GO:0000122 ... P37840 39172784
    915310 8x7o:G (3.5) BS02 IZV N/A GO:0000122 ... P37840 39172784
    915311 8x7p:A (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    915312 8x7p:B (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    915313 8x7p:C (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    915314 8x7p:D (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    915315 8x7p:E (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    915316 8x7q:A (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915317 8x7q:B (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915318 8x7q:C (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915319 8x7q:E (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915320 8x7q:F (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915321 8x7q:G (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915322 8x7q:H (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915323 8x7q:I (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915324 8x7q:J (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    915325 8x7r:A (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915326 8x7r:A (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915327 8x7r:B (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915328 8x7r:B (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915329 8x7r:C (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915330 8x7r:C (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915331 8x7r:D (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915332 8x7r:D (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915333 8x7r:D (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    915334 8x7r:E (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915335 8x7r:E (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915336 8x7r:F (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915337 8x7r:F (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915338 8x7r:G (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915339 8x7r:G (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915340 8x7r:G (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    915341 8x7r:H (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915342 8x7r:I (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915343 8x7r:J (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    915344 8x7r:J (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    915345 8x7r:J (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    915346 8x7u:A (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915347 8x7u:B (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915348 8x7u:C (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915349 8x7u:C (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915350 8x7u:D (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915351 8x7u:D (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915352 8x7u:E (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915353 8x7u:E (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915354 8x7u:F (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    915355 8x83:A (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915356 8x83:B (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915357 8x83:C (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915358 8x83:D (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915359 8x84:A (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915360 8x84:B (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915361 8x84:C (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915362 8x84:D (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    915363 8x8a:A (1.53) BS01 peptide N/A GO:0000045 ... Q9H0R8 39236246
    915364 8x8g:A (2.27) BS01 BMA N/A GO:0033925 ... A0AAT8XUK0 38938812
    915365 8x8g:A (2.27) BS02 MAN N/A GO:0033925 ... A0AAT8XUK0 38938812
    915366 8x8g:A (2.27) BS03 MAN N/A GO:0033925 ... A0AAT8XUK0 38938812
    915367 8x8g:A (2.27) BS04 SIA N/A GO:0033925 ... A0AAT8XUK0 38938812
    915368 8x8g:A (2.27) BS05 NGO N/A GO:0033925 ... A0AAT8XUK0 38938812
    915369 8x8g:A (2.27) BS06 CA N/A GO:0033925 ... A0AAT8XUK0 38938812
    915370 8x8i:A (2.54) BS01 SAM N/A GO:0009102 ... A0A1E3M3A7 39705367
    915371 8x8i:B (2.54) BS01 SAM N/A GO:0009102 ... A0A1E3M3A7 39705367
    915372 8x8i:C (2.54) BS01 SAM N/A GO:0009102 ... A0A1E3M3A7 39705367
    915373 8x8i:D (2.54) BS01 SAM N/A GO:0009102 ... A0A1E3M3A7 39705367
    915374 8x8j:A (1.72) BS01 SFG N/A GO:0009102 ... A0A1E3M3A7 39705367
    915375 8x8j:B (1.72) BS01 SFG N/A GO:0009102 ... A0A1E3M3A7 39705367
    915376 8x8k:A (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    915377 8x8k:A (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    915378 8x8k:A (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    915379 8x8k:A (2.1) BS04 GLC N/A GO:0030246 ... O95210 39236246
    915380 8x8k:B (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    915381 8x8k:B (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    915382 8x8k:C (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    915383 8x8k:C (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    915384 8x8k:C (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    915385 8x8k:C (2.1) BS04 GLC N/A GO:0030246 ... O95210 39236246
    915386 8x8k:D (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    915387 8x8k:D (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    915388 8x8k:D (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    915389 8x8l:R (2.7) BS01 peptide ? GO:0004930 ... P35346 38885377
    915390 8x8n:R (2.9) BS01 peptide ? GO:0004930 ... P35346 38885377
    915391 8x8q:F (3.14) BS01 ZN ? GO:0000166 ... R9YK28 38755176
    915392 8x8r:A (2.84) BS01 SIA N/A GO:0016020 ... A0A172QBP4 39992139
    915393 8x8r:B (2.84) BS01 SIA N/A GO:0016020 ... A0A172QBP4 39992139
    915394 8x8r:C (2.84) BS01 SIA N/A GO:0016020 ... A0A172QBP4 39992139
    915395 8x8x:A (2.6) BS01 YDW N/A GO:0004672 ... O75116 N/A
    915396 8x8x:B (2.6) BS01 YDW N/A GO:0004672 ... O75116 N/A
    915397 8x8y:A (3.2) BS01 YEA N/A GO:0004672 ... O75116 N/A
    915398 8x8y:B (3.2) BS01 YEA N/A GO:0004672 ... O75116 N/A
    915399 8x8z:A (2.7) BS01 YEI N/A GO:0004672 ... O75116 N/A
    915400 8x8z:B (2.7) BS01 YEI N/A GO:0004672 ... O75116 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).