SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915401 8x90:A (2.95) BS01 PS1 ? GO:0001540 ... O00555 38443561
    915402 8x90:A (2.95) BS02 CLR ? GO:0001540 ... O00555 38443561
    915403 8x90:A (2.95) BS03 PT5 ? GO:0001540 ... O00555 38443561
    915404 8x90:A (2.95) BS04 CA ? GO:0001540 ... O00555 38443561
    915405 8x90:A (2.95) BS05 Y01 ? GO:0001540 ... O00555 38443561
    915406 8x90:A (2.95) BS06 CLR ? GO:0001540 ... O00555 38443561
    915407 8x90:A (2.95) BS07 Y01 ? GO:0001540 ... O00555 38443561
    915408 8x90:A (2.95) BS08 Y01 ? GO:0001540 ... O00555 38443561
    915409 8x90:A (2.95) BS09 CLR ? GO:0001540 ... O00555 38443561
    915410 8x90:A (2.95) BS10 CLR ? GO:0001540 ... O00555 38443561
    915411 8x90:B (2.95) BS01 CA ? N/A P54289 38443561
    915412 8x91:A (3.11) BS01 peptide ? GO:0001540 ... O00555 38443561
    915413 8x91:A (3.11) BS02 CLR ? GO:0001540 ... O00555 38443561
    915414 8x91:A (3.11) BS03 PT5 ? GO:0001540 ... O00555 38443561
    915415 8x91:A (3.11) BS04 CA ? GO:0001540 ... O00555 38443561
    915416 8x91:A (3.11) BS05 Y01 ? GO:0001540 ... O00555 38443561
    915417 8x91:A (3.11) BS06 CLR ? GO:0001540 ... O00555 38443561
    915418 8x91:A (3.11) BS07 Y01 ? GO:0001540 ... O00555 38443561
    915419 8x91:A (3.11) BS08 Y01 ? GO:0001540 ... O00555 38443561
    915420 8x91:A (3.11) BS09 CLR ? GO:0001540 ... O00555 38443561
    915421 8x91:A (3.11) BS10 CLR ? GO:0001540 ... O00555 38443561
    915422 8x91:B (3.11) BS01 CA ? N/A P54289 38443561
    915423 8x92:A (2.2) BS01 YEW N/A GO:0004672 ... O75116 N/A
    915424 8x92:B (2.2) BS01 YEW N/A GO:0004672 ... O75116 N/A
    915425 8x93:A (2.92) BS01 CLR ? GO:0001540 ... O00555 38443561
    915426 8x93:A (2.92) BS02 PT5 ? GO:0001540 ... O00555 38443561
    915427 8x93:A (2.92) BS03 Y01 ? GO:0001540 ... O00555 38443561
    915428 8x93:A (2.92) BS04 CLR ? GO:0001540 ... O00555 38443561
    915429 8x93:A (2.92) BS05 CLR ? GO:0001540 ... O00555 38443561
    915430 8x93:A (2.92) BS06 Y01 ? GO:0001540 ... O00555 38443561
    915431 8x93:A (2.92) BS07 Y01 ? GO:0001540 ... O00555 38443561
    915432 8x93:A (2.92) BS08 CLR ? GO:0001540 ... O00555 38443561
    915433 8x93:A (2.92) BS09 CLR ? GO:0001540 ... O00555 38443561
    915434 8x93:A (2.92) BS10 CA ? GO:0001540 ... O00555 38443561
    915435 8x93:B (2.92) BS01 CA ? N/A P54289 38443561
    915436 8x94:A (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    915437 8x94:B (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    915438 8x94:C (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    915439 8x94:C (2.55) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    915440 8x94:D (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    915441 8x9d:A (2.11) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915442 8x9d:A (2.11) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915443 8x9d:A (2.11) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915444 8x9d:A (2.11) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915445 8x9e:A (2.5) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915446 8x9e:A (2.5) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915447 8x9e:A (2.5) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915448 8x9e:A (2.5) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915449 8x9f:A (2.48) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915450 8x9f:A (2.48) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915451 8x9f:A (2.48) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915452 8x9f:A (2.48) BS04 S8I 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915453 8x9g:A (3.11) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915454 8x9g:A (3.11) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915455 8x9g:A (3.11) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915456 8x9g:A (3.11) BS04 S7L 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915457 8x9h:A (2.2) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915458 8x9h:A (2.2) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915459 8x9h:A (2.2) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915460 8x9h:A (2.2) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    915461 8x9t:R (2.75) BS01 YNH N/A GO:0004888 ... Q6QNK2 39884271
    915462 8x9u:R (2.88) BS01 A1LU1 N/A GO:0004888 ... Q6QNK2 39884271
    915463 8x9v:C (2.36) BS01 FMN N/A GO:0003954 ... A0A0K0GM91 38284296
    915464 8x9v:D (2.36) BS01 FES N/A GO:0003954 ... A0A0K0GMP8 38284296
    915465 8x9v:F (2.36) BS01 FMN N/A GO:0003954 ... A0A0K0GM91 38284296
    915466 8x9v:O (2.36) BS01 FES N/A GO:0003954 ... A0A0K0GMP8 38284296
    915467 8xa8:D (3.19) BS01 ZN N/A GO:0000287 ... P37871 N/A
    915468 8xa8:D (3.19) BS02 ZN N/A GO:0000287 ... P37871 N/A
    915469 8xa9:A (2.32) BS01 dna 3.1.-.- N/A Q9BQP7 38471810
    915470 8xa9:A (2.32) BS02 dna 3.1.-.- N/A Q9BQP7 38471810
    915471 8xa9:A (2.32) BS03 CA 3.1.-.- N/A Q9BQP7 38471810
    915472 8xa9:A (2.32) BS04 CA 3.1.-.- N/A Q9BQP7 38471810
    915473 8xa9:B (2.32) BS01 dna 3.1.-.- N/A Q9BQP7 38471810
    915474 8xa9:B (2.32) BS02 dna 3.1.-.- N/A Q9BQP7 38471810
    915475 8xa9:B (2.32) BS03 dna 3.1.-.- N/A Q9BQP7 38471810
    915476 8xa9:B (2.32) BS04 CA 3.1.-.- N/A Q9BQP7 38471810
    915477 8xa9:B (2.32) BS05 CA 3.1.-.- N/A Q9BQP7 38471810
    915478 8xag:A (1.75) BS01 peptide N/A GO:0006325 ... Q946J8 N/A
    915479 8xag:A (1.75) BS02 peptide N/A GO:0006325 ... Q946J8 N/A
    915480 8xag:B (1.75) BS01 peptide N/A GO:0006325 ... Q946J8 N/A
    915481 8xag:B (1.75) BS02 peptide N/A GO:0006325 ... Q946J8 N/A
    915482 8xak:A (3.5) BS01 dna N/A GO:0000723 ... P07271 39030241
    915483 8xak:A (3.5) BS02 ADP N/A GO:0000723 ... P07271 39030241
    915484 8xak:A (3.5) BS03 ALF N/A GO:0000723 ... P07271 39030241
    915485 8xak:C (3.5) BS01 dna N/A GO:0000723 ... P07271 39030241
    915486 8xak:C (3.5) BS02 ADP N/A GO:0000723 ... P07271 39030241
    915487 8xak:C (3.5) BS03 ALF N/A GO:0000723 ... P07271 39030241
    915488 8xam:A (1.3) BS01 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    915489 8xam:A (1.3) BS02 XRH 2.5.1.6 GO:0004478 ... P31153 38342078
    915490 8xam:A (1.3) BS03 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    915491 8xam:B (1.3) BS01 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    915492 8xam:B (1.3) BS02 XRH 2.5.1.6 GO:0004478 ... P31153 38342078
    915493 8xam:B (1.3) BS03 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    915494 8xar:A (1.19) BS01 YMW N/A GO:0004478 ... P31153 38818879
    915495 8xar:A (1.19) BS02 SAM N/A GO:0004478 ... P31153 38818879
    915496 8xas:A (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915497 8xas:A (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915498 8xas:B (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915499 8xas:B (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915500 8xas:C (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915501 8xas:C (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915502 8xas:D (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915503 8xas:D (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915504 8xas:E (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915505 8xas:E (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915506 8xas:F (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    915507 8xas:F (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    915508 8xaw:A (2.73) BS01 ADP N/A N/A N/A 38834762
    915509 8xaw:A (2.73) BS02 MG N/A N/A N/A 38834762
    915510 8xaw:B (2.73) BS01 dna N/A N/A N/A 38834762
    915511 8xaw:B (2.73) BS02 dna N/A N/A N/A 38834762
    915512 8xaw:B (2.73) BS03 ANP N/A N/A N/A 38834762
    915513 8xaw:C (2.73) BS01 dna N/A N/A N/A 38834762
    915514 8xaw:C (2.73) BS02 dna N/A N/A N/A 38834762
    915515 8xaw:C (2.73) BS03 ANP N/A N/A N/A 38834762
    915516 8xaw:C (2.73) BS04 ANP N/A N/A N/A 38834762
    915517 8xaw:C (2.73) BS05 MG N/A N/A N/A 38834762
    915518 8xaw:D (2.73) BS01 dna N/A N/A N/A 38834762
    915519 8xaw:D (2.73) BS02 dna N/A N/A N/A 38834762
    915520 8xaw:D (2.73) BS03 ANP N/A N/A N/A 38834762
    915521 8xaw:D (2.73) BS04 MG N/A N/A N/A 38834762
    915522 8xaw:E (2.73) BS01 dna N/A N/A N/A 38834762
    915523 8xaw:E (2.73) BS02 ADP N/A N/A N/A 38834762
    915524 8xaw:E (2.73) BS03 MG N/A N/A N/A 38834762
    915525 8xaw:F (2.73) BS01 ADP N/A N/A N/A 38834762
    915526 8xaw:F (2.73) BS02 MG N/A N/A N/A 38834762
    915527 8xax:A (2.92) BS01 dna N/A N/A N/A 38834762
    915528 8xax:A (2.92) BS02 dna N/A N/A N/A 38834762
    915529 8xax:A (2.92) BS03 ANP N/A N/A N/A 38834762
    915530 8xax:B (2.92) BS01 dna N/A N/A N/A 38834762
    915531 8xax:B (2.92) BS02 dna N/A N/A N/A 38834762
    915532 8xax:B (2.92) BS03 ANP N/A N/A N/A 38834762
    915533 8xax:C (2.92) BS01 dna N/A N/A N/A 38834762
    915534 8xax:C (2.92) BS02 dna N/A N/A N/A 38834762
    915535 8xax:C (2.92) BS03 ANP N/A N/A N/A 38834762
    915536 8xax:C (2.92) BS04 ANP N/A N/A N/A 38834762
    915537 8xax:C (2.92) BS05 MG N/A N/A N/A 38834762
    915538 8xax:D (2.92) BS01 dna N/A N/A N/A 38834762
    915539 8xax:E (2.92) BS01 ADP N/A N/A N/A 38834762
    915540 8xax:E (2.92) BS02 MG N/A N/A N/A 38834762
    915541 8xax:F (2.92) BS01 ADP N/A N/A N/A 38834762
    915542 8xax:F (2.92) BS02 MG N/A N/A N/A 38834762
    915543 8xay:A (2.81) BS01 AGS N/A N/A N/A 38834762
    915544 8xay:A (2.81) BS02 MG N/A N/A N/A 38834762
    915545 8xay:B (2.81) BS01 dna N/A N/A N/A 38834762
    915546 8xay:B (2.81) BS02 dna N/A N/A N/A 38834762
    915547 8xay:B (2.81) BS03 AGS N/A N/A N/A 38834762
    915548 8xay:C (2.81) BS01 dna N/A N/A N/A 38834762
    915549 8xay:C (2.81) BS02 dna N/A N/A N/A 38834762
    915550 8xay:C (2.81) BS03 AGS N/A N/A N/A 38834762
    915551 8xay:C (2.81) BS04 AGS N/A N/A N/A 38834762
    915552 8xay:D (2.81) BS01 dna N/A N/A N/A 38834762
    915553 8xay:D (2.81) BS02 dna N/A N/A N/A 38834762
    915554 8xay:D (2.81) BS03 AGS N/A N/A N/A 38834762
    915555 8xay:D (2.81) BS04 MG N/A N/A N/A 38834762
    915556 8xay:E (2.81) BS01 dna N/A N/A N/A 38834762
    915557 8xay:E (2.81) BS02 ADP N/A N/A N/A 38834762
    915558 8xay:E (2.81) BS03 MG N/A N/A N/A 38834762
    915559 8xay:F (2.81) BS01 ADP N/A N/A N/A 38834762
    915560 8xay:F (2.81) BS02 MG N/A N/A N/A 38834762
    915561 8xb0:A (1.12) BS01 YN8 N/A GO:0004478 ... P31153 38818879
    915562 8xb0:A (1.12) BS02 SAM N/A GO:0004478 ... P31153 38818879
    915563 8xb1:A (2.85) BS01 ZX3 N/A GO:0004672 ... P36888 38751627
    915564 8xb2:A (3.04) BS01 YNT N/A GO:0005515 ... P0AEX9
    P23975
    39143211
    915565 8xb3:A (2.8) BS01 YMN N/A GO:0005515 ... P0AEX9
    P23975
    39143211
    915566 8xba:A (1.48) BS01 XYS N/A N/A A0A090T8V4 40401997
    915567 8xba:A (1.48) BS02 XYP N/A N/A A0A090T8V4 40401997
    915568 8xbb:A (1.57) BS01 XYP N/A N/A A0A090T8V4 40401997
    915569 8xbb:A (1.57) BS02 XYP N/A N/A A0A090T8V4 40401997
    915570 8xbc:A (1.36) BS01 XYP N/A N/A A0A090T8V4 40401997
    915571 8xbc:A (1.36) BS02 XYP N/A N/A A0A090T8V4 40401997
    915572 8xbc:A (1.36) BS03 XYP N/A N/A A0A090T8V4 40401997
    915573 8xbe:A (3.4) BS01 KW0 ? GO:0004930 ... Q9UPC5 38326347
    915574 8xbg:A (3.43) BS01 KW0 ? GO:0004930 ... Q9UPC5 38326347
    915575 8xbh:R (2.83) BS01 KW3 ? GO:0004930 ... Q9UPC5 38326347
    915576 8xbi:R (3.06) BS01 KW3 ? GO:0004930 ... Q9UPC5 38326347
    915577 8xbj:A (1.55) BS01 HEM N/A GO:0004601 ... P02185 N/A
    915578 8xbj:A (1.55) BS02 Y6C N/A GO:0004601 ... P02185 N/A
    915579 8xbj:A (1.55) BS03 Y6C N/A GO:0004601 ... P02185 N/A
    915580 8xbk:A (2.42) BS01 YR9 N/A GO:0000122 ... P09467 39520680
    915581 8xbk:B (2.42) BS01 YR9 N/A GO:0000122 ... P09467 39520680
    915582 8xbk:C (2.42) BS01 YR9 N/A GO:0000122 ... P09467 39520680
    915583 8xbk:C (2.42) BS02 MG N/A GO:0000122 ... P09467 39520680
    915584 8xbk:D (2.42) BS01 YR9 N/A GO:0000122 ... P09467 39520680
    915585 8xbk:D (2.42) BS02 MG N/A GO:0000122 ... P09467 39520680
    915586 8xbm:A (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915587 8xbm:B (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915588 8xbm:C (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915589 8xbm:D (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915590 8xbm:E (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915591 8xbm:F (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915592 8xbm:G (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915593 8xbm:H (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915594 8xbm:I (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915595 8xbm:J (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915596 8xbm:K (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915597 8xbm:L (3.0) BS01 PIO N/A GO:0005922 ... P17302 N/A
    915598 8xbn:A (1.35) BS01 COA N/A GO:0005737 ... Q9ZV05 N/A
    915599 8xbn:C (1.35) BS01 COA N/A GO:0005737 ... Q9ZV05 N/A
    915600 8xbo:A (2.53) BS01 TPP N/A GO:0000287 ... P20906 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).