SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    915801 8xcy:A (2.91) BS02 GGL 1.4.1.3 GO:0004352 ... O74024 38750092
    915802 8xcz:A (2.83) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915803 8xcz:A (2.83) BS02 GGL 1.4.1.3 GO:0004352 ... O74024 38750092
    915804 8xd0:A (2.83) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 38750092
    915805 8xd0:A (2.83) BS02 AKG 1.4.1.3 GO:0004352 ... O74024 38750092
    915806 8xd1:A (2.96) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915807 8xd2:A (2.64) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915808 8xd3:A (2.87) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915809 8xd3:A (2.87) BS02 GGL 1.4.1.3 GO:0004352 ... O74024 38750092
    915810 8xd4:A (2.87) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915811 8xd5:A (2.75) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 38750092
    915812 8xd5:A (2.75) BS02 GGL 1.4.1.3 GO:0004352 ... O74024 38750092
    915813 8xd6:A (2.79) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 38750092
    915814 8xd6:A (2.79) BS02 AKG 1.4.1.3 GO:0004352 ... O74024 38750092
    915815 8xd6:A (2.79) BS03 AKG 1.4.1.3 GO:0004352 ... O74024 38750092
    915816 8xd7:A (2.6) BS01 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915817 8xd7:A (2.6) BS02 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915818 8xd7:B (2.6) BS01 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915819 8xd7:B (2.6) BS02 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915820 8xd7:C (2.6) BS01 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915821 8xd7:C (2.6) BS02 A1LU9 N/A GO:0015204 ... Q15849 39587082
    915822 8xda:A (3.0) BS01 URE N/A GO:0015204 ... Q15849 39587082
    915823 8xda:A (3.0) BS02 URE N/A GO:0015204 ... Q15849 39587082
    915824 8xda:B (3.0) BS01 URE N/A GO:0015204 ... Q15849 39587082
    915825 8xda:B (3.0) BS02 URE N/A GO:0015204 ... Q15849 39587082
    915826 8xda:C (3.0) BS01 URE N/A GO:0015204 ... Q15849 39587082
    915827 8xda:C (3.0) BS02 URE N/A GO:0015204 ... Q15849 39587082
    915828 8xdb:A (3.3) BS01 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915829 8xdb:A (3.3) BS02 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915830 8xdb:B (3.3) BS01 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915831 8xdb:B (3.3) BS02 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915832 8xdb:C (3.3) BS01 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915833 8xdb:C (3.3) BS02 A1LYJ N/A GO:0015204 ... Q15849 39587082
    915834 8xdc:A (3.0) BS01 A1LVA N/A GO:0015204 ... Q15849 39587082
    915835 8xdc:B (3.0) BS01 A1LVA N/A GO:0015204 ... Q15849 39587082
    915836 8xdc:C (3.0) BS01 A1LVA N/A GO:0015204 ... Q15849 39587082
    915837 8xdd:A (3.0) BS01 8HC N/A GO:0015204 ... Q15849 39587082
    915838 8xdd:A (3.0) BS02 SZ4 N/A GO:0015204 ... Q15849 39587082
    915839 8xdd:B (3.0) BS01 8HC N/A GO:0015204 ... Q15849 39587082
    915840 8xdd:B (3.0) BS02 SZ4 N/A GO:0015204 ... Q15849 39587082
    915841 8xdd:C (3.0) BS01 8HC N/A GO:0015204 ... Q15849 39587082
    915842 8xdd:C (3.0) BS02 SZ4 N/A GO:0015204 ... Q15849 39587082
    915843 8xdh:A (3.1) BS01 URE N/A GO:0005886 ... Q533H0 39587082
    915844 8xdh:A (3.1) BS02 URE N/A GO:0005886 ... Q533H0 39587082
    915845 8xdh:B (3.1) BS01 URE N/A GO:0005886 ... Q533H0 39587082
    915846 8xdh:B (3.1) BS02 URE N/A GO:0005886 ... Q533H0 39587082
    915847 8xdh:C (3.1) BS01 URE N/A GO:0005886 ... Q533H0 39587082
    915848 8xdh:C (3.1) BS02 URE N/A GO:0005886 ... Q533H0 39587082
    915849 8xdi:A (3.1) BS01 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915850 8xdi:A (3.1) BS02 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915851 8xdi:B (3.1) BS01 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915852 8xdi:B (3.1) BS02 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915853 8xdi:C (3.1) BS01 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915854 8xdi:C (3.1) BS02 A1LU9 N/A GO:0005886 ... Q533H0 39587082
    915855 8xdj:A (1.65) BS01 AMP N/A N/A Q5ZRG2 N/A
    915856 8xdj:A (1.65) BS02 MG N/A N/A Q5ZRG2 N/A
    915857 8xdj:B (1.65) BS01 MG N/A N/A Q5ZRG2 N/A
    915858 8xdj:B (1.65) BS02 AMP N/A N/A Q5ZRG2 N/A
    915859 8xdj:C (1.65) BS01 AMP N/A N/A Q5ZRG2 N/A
    915860 8xdj:C (1.65) BS02 MG N/A N/A Q5ZRG2 N/A
    915861 8xdj:C (1.65) BS03 AMP N/A N/A Q5ZRG2 N/A
    915862 8xdj:D (1.65) BS01 AMP N/A N/A Q5ZRG2 N/A
    915863 8xdj:D (1.65) BS02 MG N/A N/A Q5ZRG2 N/A
    915864 8xdj:D (1.65) BS03 AMP N/A N/A Q5ZRG2 N/A
    915865 8xdl:A (2.44) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915866 8xdl:B (2.44) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915867 8xdl:C (2.44) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915868 8xdm:A (2.45) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915869 8xdm:B (2.45) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915870 8xdm:C (2.45) BS01 ADP N/A GO:0000287 ... P68135 40672661
    915871 8xdn:A (2.93) BS01 peptide N/A GO:0005515 ... O96008 N/A
    915872 8xdn:A (2.93) BS02 FUD N/A GO:0005515 ... O96008 N/A
    915873 8xdn:B (2.93) BS01 peptide N/A GO:0005515 ... O96008 N/A
    915874 8xdo:A (1.37) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915875 8xdo:A (1.37) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915876 8xdo:B (1.37) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915877 8xdo:B (1.37) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915878 8xdp:A (1.75) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915879 8xdp:A (1.75) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915880 8xdp:B (1.75) BS01 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915881 8xdp:B (1.75) BS02 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915882 8xdp:B (1.75) BS03 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915883 8xdq:A (1.77) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915884 8xdq:A (1.77) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915885 8xdq:B (1.77) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915886 8xdq:B (1.77) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915887 8xdr:A (1.83) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915888 8xdr:A (1.83) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915889 8xdr:B (1.83) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915890 8xdr:B (1.83) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915891 8xdr:B (1.83) BS03 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915892 8xds:A (1.97) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915893 8xds:A (1.97) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915894 8xds:B (1.97) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915895 8xds:B (1.97) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915896 8xdt:A (2.65) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915897 8xdt:A (2.65) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915898 8xdt:B (2.65) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915899 8xdt:B (2.65) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915900 8xdu:A (1.92) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915901 8xdu:A (1.92) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915902 8xdu:B (1.92) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915903 8xdu:B (1.92) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915904 8xdv:A (2.32) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915905 8xdv:A (2.32) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915906 8xdv:B (2.32) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915907 8xdv:B (2.32) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915908 8xdy:A (2.2) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915909 8xdy:A (2.2) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915910 8xdy:B (2.2) BS01 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915911 8xdy:B (2.2) BS02 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915912 8xdy:B (2.2) BS03 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915913 8xe0:A (2.2) BS01 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915914 8xe0:A (2.2) BS02 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915915 8xe0:A (2.2) BS03 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915916 8xe0:B (2.2) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915917 8xe0:B (2.2) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915918 8xe2:A (2.43) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915919 8xe2:A (2.43) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915920 8xe2:A (2.43) BS03 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915921 8xe2:B (2.43) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915922 8xe2:B (2.43) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915923 8xe2:B (2.43) BS03 H6N N/A GO:0008171 ... A0A6B9TNK2 N/A
    915924 8xe2:C (2.43) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915925 8xe2:C (2.43) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915926 8xe2:D (2.43) BS01 MG N/A GO:0008171 ... A0A6B9TNK2 N/A
    915927 8xe2:D (2.43) BS02 SAH N/A GO:0008171 ... A0A6B9TNK2 N/A
    915928 8xe3:A (1.72) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915929 8xe3:A (1.72) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915930 8xe3:B (1.72) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915931 8xe3:B (1.72) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915932 8xe4:A (1.96) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915933 8xe4:A (1.96) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915934 8xe4:B (1.96) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915935 8xe4:B (1.96) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915936 8xe4:C (1.96) BS01 A1LU2 N/A GO:0008171 ... A0A077EWA5 N/A
    915937 8xe4:C (1.96) BS02 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915938 8xe4:C (1.96) BS03 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915939 8xe4:D (1.96) BS01 A1LU2 N/A GO:0008171 ... A0A077EWA5 N/A
    915940 8xe4:D (1.96) BS02 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915941 8xe4:D (1.96) BS03 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915942 8xe5:A (2.07) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915943 8xe5:A (2.07) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915944 8xe5:A (2.07) BS03 H6N N/A GO:0008171 ... A0A077EWA5 N/A
    915945 8xe5:B (2.07) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915946 8xe5:B (2.07) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915947 8xe5:C (2.07) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915948 8xe5:C (2.07) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915949 8xe5:C (2.07) BS03 H6N N/A GO:0008171 ... A0A077EWA5 N/A
    915950 8xe5:D (2.07) BS01 MG N/A GO:0008171 ... A0A077EWA5 N/A
    915951 8xe5:D (2.07) BS02 SAH N/A GO:0008171 ... A0A077EWA5 N/A
    915952 8xe7:A (1.95) BS01 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 38647411
    915953 8xee:A (3.03) BS01 SAH N/A GO:0008168 ... Q9UBC3 39290110
    915954 8xee:D (3.03) BS01 SAH N/A GO:0008168 ... Q9UBC3 39290110
    915955 8xej:X (3.66) BS01 DLP ? GO:0005886 ... Q9H6D3 38364890
    915956 8xem:A (1.8) BS01 MG N/A N/A Q5ZRG2 N/A
    915957 8xem:B (1.8) BS01 MG N/A N/A Q5ZRG2 N/A
    915958 8xem:C (1.8) BS01 MG N/A N/A Q5ZRG2 N/A
    915959 8xem:D (1.8) BS01 MG N/A N/A Q5ZRG2 N/A
    915960 8xer:A (3.0) BS01 A1LU4 N/A GO:0007155 ... P06756 N/A
    915961 8xer:B (3.0) BS01 A1LU4 N/A N/A P05106 N/A
    915962 8xes:A (1.78) BS01 peptide N/A N/A A0A0G2JPD3 38885041
    915963 8xet:A (1.11) BS01 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915964 8xet:A (1.11) BS02 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915965 8xeu:A (1.8) BS01 FCE N/A GO:0030288 ... A0A5S4TPK8 39395422
    915966 8xf0:C (2.5) BS01 MG N/A GO:0015979 ... A0AAT8XUK1 38238241
    915967 8xf0:E (2.5) BS01 MG N/A GO:0015979 ... A0AAT8XUK1 38238241
    915968 8xf0:F (2.5) BS01 MG N/A GO:0015979 ... A0AAT8XUK1 38238241
    915969 8xf4:A (2.0) BS01 OX8 N/A GO:0030288 ... A0A5S4TPK8 39395422
    915970 8xf4:A (2.0) BS02 OX8 N/A GO:0030288 ... A0A5S4TPK8 39395422
    915971 8xf6:A (3.1) BS01 A1LU4 N/A GO:0007155 ... P06756 N/A
    915972 8xf6:B (3.1) BS01 A1LU4 N/A N/A P05106 N/A
    915973 8xf7:A (1.12) BS01 6L0 N/A GO:0030288 ... A0A5S4TPK8 39395422
    915974 8xf7:A (1.12) BS02 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915975 8xf7:A (1.12) BS03 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915976 8xf8:A (1.15) BS01 0UE N/A GO:0030288 ... A0A5S4TPK8 39395422
    915977 8xf9:A (1.15) BS01 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915978 8xf9:A (1.15) BS02 ZN N/A GO:0030288 ... A0A5S4TPK8 39395422
    915979 8xfa:A (1.85) BS01 6L0 N/A GO:0030288 ... A0A5S4TPK8 39395422
    915980 8xfc:D (3.89) BS01 ATP N/A GO:0000166 ... I6Y482 N/A
    915981 8xfc:D (3.89) BS02 ATP N/A GO:0000166 ... I6Y482 N/A
    915982 8xfd:A (2.1) BS01 MG 2.7.1.40 GO:0000287 ... P30613 N/A
    915983 8xfd:A (2.1) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 N/A
    915984 8xfd:A (2.1) BS03 WV2 2.7.1.40 GO:0000287 ... P30613 N/A
    915985 8xfd:B (2.1) BS01 MG 2.7.1.40 GO:0000287 ... P30613 N/A
    915986 8xfd:B (2.1) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 N/A
    915987 8xfd:B (2.1) BS03 WV2 2.7.1.40 GO:0000287 ... P30613 N/A
    915988 8xfd:C (2.1) BS01 MG 2.7.1.40 GO:0000287 ... P30613 N/A
    915989 8xfd:C (2.1) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 N/A
    915990 8xfd:C (2.1) BS03 WV2 2.7.1.40 GO:0000287 ... P30613 N/A
    915991 8xfd:D (2.1) BS01 MG 2.7.1.40 GO:0000287 ... P30613 N/A
    915992 8xfd:D (2.1) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 N/A
    915993 8xfd:D (2.1) BS03 WV2 2.7.1.40 GO:0000287 ... P30613 N/A
    915994 8xfg:A (2.8) BS01 A1LU7 N/A GO:0007155 ... P06756 N/A
    915995 8xfg:B (2.8) BS01 A1LU7 N/A N/A P05106 N/A
    915996 8xfh:A (2.8) BS01 UDP N/A GO:0008194 ... A0A0M4KE44 39406733
    915997 8xfh:B (2.8) BS01 UDP N/A GO:0008194 ... A0A0M4KE44 39406733
    915998 8xfi:A (1.95) BS01 6L0 N/A GO:0030288 ... A0A5S4TPK8 39395422
    915999 8xfi:B (1.95) BS01 6L0 N/A GO:0030288 ... A0A5S4TPK8 39395422
    916000 8xfm:A (2.6) BS01 A1LU6 2.7.11.1 GO:0004672 ... Q9HBH9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).