SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4572 4573 4574 4575 4576 4577 4578 4579 4580 4581 4582 4583 4584 4585 4586 4587 4588 4589 4590 4591 4592 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    916201 8xgy:H (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    916202 8xgy:H (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916203 8xgy:H (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916204 8xgy:I (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916205 8xgy:I (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    916206 8xgy:I (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916207 8xgy:J (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    916208 8xgy:J (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916209 8xgy:K (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916210 8xgy:K (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    916211 8xgy:K (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916212 8xgy:L (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    916213 8xgy:L (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    916214 8xgz:A (2.44) BS01 A3P N/A GO:0005737 ... A0A2P4SYK2 41547513
    916215 8xha:A (2.27) BS01 PGU 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916216 8xha:A (2.27) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916217 8xha:B (2.27) BS01 PGU 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916218 8xha:B (2.27) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916219 8xhd:A (2.7) BS01 PGU 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916220 8xhd:A (2.7) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916221 8xhd:B (2.7) BS01 PGU 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916222 8xhd:B (2.7) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916223 8xhe:A (2.64) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916224 8xhe:B (2.64) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916225 8xhe:C (2.64) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916226 8xhg:A (2.54) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916227 8xhg:B (2.54) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916228 8xhg:C (2.54) BS01 SIA N/A GO:0016020 ... Q67333 39562538
    916229 8xhj:A (2.187) BS01 CO N/A GO:0003868 ... P93836 N/A
    916230 8xhj:A (2.187) BS02 HBA N/A GO:0003868 ... P93836 N/A
    916231 8xhk:A (2.79) BS01 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916232 8xhk:A (2.79) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916233 8xhk:B (2.79) BS01 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916234 8xhk:B (2.79) BS02 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916235 8xhk:C (2.79) BS01 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916236 8xhk:C (2.79) BS02 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916237 8xhk:D (2.79) BS01 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916238 8xhk:D (2.79) BS02 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916239 8xhk:E (2.79) BS01 PLP 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916240 8xhk:E (2.79) BS02 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916241 8xhk:F (2.79) BS01 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916242 8xhk:F (2.79) BS02 PLR 2.3.1.47 GO:0008710 ... A0A6B9KSL0 38642679
    916243 8xhm:A (2.12) BS01 UMP N/A GO:0000287 ... N/A 39390714
    916244 8xho:A (2.5) BS01 CA 3.1.1.101
    3.1.1.74
    N/A A0A1T4KK94 N/A
    916245 8xho:B (2.5) BS01 CA 3.1.1.101
    3.1.1.74
    N/A A0A1T4KK94 N/A
    916246 8xho:B (2.5) BS02 CA 3.1.1.101
    3.1.1.74
    N/A A0A1T4KK94 N/A
    916247 8xhp:A (1.86001) BS01 FE2 N/A N/A A0A2G1XAR5 40389404
    916248 8xhp:A (1.86001) BS02 AKG N/A N/A A0A2G1XAR5 40389404
    916249 8xhp:B (1.86001) BS01 FE2 N/A N/A A0A2G1XAR5 40389404
    916250 8xhp:B (1.86001) BS02 AKG N/A N/A A0A2G1XAR5 40389404
    916251 8xhp:C (1.86001) BS01 FE2 N/A N/A A0A2G1XAR5 40389404
    916252 8xhp:C (1.86001) BS02 AKG N/A N/A A0A2G1XAR5 40389404
    916253 8xhq:A (1.90001) BS01 FE2 N/A N/A N/A 40389404
    916254 8xhq:A (1.90001) BS02 AKG N/A N/A N/A 40389404
    916255 8xhq:A (1.90001) BS03 A1LVE N/A N/A N/A 40389404
    916256 8xhq:B (1.90001) BS01 FE2 N/A N/A N/A 40389404
    916257 8xhq:B (1.90001) BS02 AKG N/A N/A N/A 40389404
    916258 8xhq:B (1.90001) BS03 A1LVE N/A N/A N/A 40389404
    916259 8xhq:C (1.90001) BS01 FE2 N/A N/A N/A 40389404
    916260 8xhq:C (1.90001) BS02 AKG N/A N/A N/A 40389404
    916261 8xhq:C (1.90001) BS03 A1LVE N/A N/A N/A 40389404
    916262 8xhq:D (1.90001) BS01 FE2 N/A N/A N/A 40389404
    916263 8xhq:D (1.90001) BS02 AKG N/A N/A N/A 40389404
    916264 8xhq:D (1.90001) BS03 A1LVE N/A N/A N/A 40389404
    916265 8xhr:A (2.1) BS01 CTP ? N/A P96356 38485701
    916266 8xhr:B (2.1) BS01 CTP ? N/A P96356 38485701
    916267 8xhr:C (2.1) BS01 CTP ? N/A P96356 38485701
    916268 8xht:A (1.81954) BS01 FE2 N/A N/A A0A241XEQ7 40389404
    916269 8xht:A (1.81954) BS02 AKG N/A N/A A0A241XEQ7 40389404
    916270 8xht:B (1.81954) BS01 FE2 N/A N/A A0A241XEQ7 40389404
    916271 8xht:C (1.81954) BS01 FE2 N/A N/A A0A241XEQ7 40389404
    916272 8xht:C (1.81954) BS02 AKG N/A N/A A0A241XEQ7 40389404
    916273 8xht:D (1.81954) BS01 FE2 N/A N/A A0A241XEQ7 40389404
    916274 8xht:D (1.81954) BS02 AKG N/A N/A A0A241XEQ7 40389404
    916275 8xhu:A (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916276 8xhu:B (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916277 8xhu:C (2.4) BS01 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916278 8xhv:A (2.81) BS01 rna N/A GO:0003676 ... N/A 39315697
    916279 8xhw:A (2.94) BS01 RET N/A GO:0005886 ... Q18DH5 40368960
    916280 8xhw:B (2.94) BS01 RET N/A GO:0005886 ... Q18DH5 40368960
    916281 8xhw:C (2.94) BS01 RET N/A GO:0005886 ... Q18DH5 40368960
    916282 8xhw:D (2.94) BS01 RET N/A GO:0005886 ... Q18DH5 40368960
    916283 8xhx:A (1.61) BS01 AKG N/A N/A A0A241XEQ7 40389404
    916284 8xhx:A (1.61) BS02 A1LVG N/A N/A A0A241XEQ7 40389404
    916285 8xhx:A (1.61) BS03 FE N/A N/A A0A241XEQ7 40389404
    916286 8xhy:A (1.71002) BS01 FE2 N/A N/A A0A2G1XAX5 40389404
    916287 8xhy:A (1.71002) BS02 AKG N/A N/A A0A2G1XAX5 40389404
    916288 8xhy:A (1.71002) BS03 A1LVH N/A N/A A0A2G1XAX5 40389404
    916289 8xi2:A (2.6) BS01 rna N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916290 8xi2:A (2.6) BS02 rna N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916291 8xi2:A (2.6) BS03 rna N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916292 8xi2:A (2.6) BS04 peptide N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916293 8xi2:A (2.6) BS05 rna N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916294 8xi2:A (2.6) BS06 rna N/A GO:0000386 ... A0A2K3E5Q8 39415054
    916295 8xi2:C (2.6) BS01 GTP N/A GO:0000398 ... A8JCA8 39415054
    916296 8xi2:C (2.6) BS02 MG N/A GO:0000398 ... A8JCA8 39415054
    916297 8xi2:I (2.6) BS01 rna N/A GO:0000349 ... A0A2K3D3K4 39415054
    916298 8xi2:J (2.6) BS01 rna N/A GO:0000245 ... A0A2K3CXZ4 39415054
    916299 8xi2:L (2.6) BS01 rna N/A GO:0000398 ... A0A2K3DYR4 39415054
    916300 8xi2:M (2.6) BS01 rna N/A GO:0000413 ... A0A2K3E769 39415054
    916301 8xi2:M (2.6) BS02 rna N/A GO:0000413 ... A0A2K3E769 39415054
    916302 8xi2:N (2.6) BS01 rna N/A GO:0000398 ... A0A2K3DAL7 39415054
    916303 8xi2:N (2.6) BS02 ZN N/A GO:0000398 ... A0A2K3DAL7 39415054
    916304 8xi2:O (2.6) BS01 rna N/A GO:0000974 ... A0A2K3E050 39415054
    916305 8xi2:O (2.6) BS02 rna N/A GO:0000974 ... A0A2K3E050 39415054
    916306 8xi2:O (2.6) BS03 ZN N/A GO:0000974 ... A0A2K3E050 39415054
    916307 8xi2:O (2.6) BS04 ZN N/A GO:0000974 ... A0A2K3E050 39415054
    916308 8xi2:P (2.6) BS01 rna N/A GO:0000398 ... A0A2K3CN43 39415054
    916309 8xi2:P (2.6) BS02 rna N/A GO:0000398 ... A0A2K3CN43 39415054
    916310 8xi2:R (2.6) BS01 rna N/A GO:0000398 ... A0A2K3E831 39415054
    916311 8xi2:R (2.6) BS02 rna N/A GO:0000398 ... A0A2K3E831 39415054
    916312 8xi2:T (2.6) BS01 rna N/A GO:0000398 ... A0A2K3DAW8 39415054
    916313 8xi2:V (2.6) BS01 peptide N/A GO:0000398 ... A0A2K3DML4 39415054
    916314 8xi2:W (2.6) BS01 rna N/A GO:0000398 ... A0A2K3DUN6 39415054
    916315 8xi2:a (2.6) BS01 rna N/A GO:0000243 ... A8I0E2 39415054
    916316 8xi2:b (2.6) BS01 rna N/A GO:0000398 ... A0A2K3CX88 39415054
    916317 8xi2:c (2.6) BS01 rna N/A GO:0000243 ... A0A2K3CTT9 39415054
    916318 8xi2:d (2.6) BS01 rna N/A GO:0000387 ... A8I074 39415054
    916319 8xi2:e (2.6) BS01 rna N/A GO:0000387 ... A8IYZ2 39415054
    916320 8xi2:f (2.6) BS01 rna N/A GO:0000398 ... A8J834 39415054
    916321 8xi2:g (2.6) BS01 rna N/A GO:0000387 ... A8HRS8 39415054
    916322 8xi4:M (3.4) BS01 CA N/A N/A P98155 39127734
    916323 8xi4:M (3.4) BS02 CA N/A N/A P98155 39127734
    916324 8xi4:N (3.4) BS01 CA N/A N/A P98155 39127734
    916325 8xi4:N (3.4) BS02 CA N/A N/A P98155 39127734
    916326 8xi4:O (3.4) BS01 CA N/A N/A P98155 39127734
    916327 8xi4:O (3.4) BS02 CA N/A N/A P98155 39127734
    916328 8xi4:P (3.4) BS01 CA N/A N/A P98155 39127734
    916329 8xi4:P (3.4) BS02 CA N/A N/A P98155 39127734
    916330 8xi5:M (3.4) BS01 CA N/A N/A P98155 39127734
    916331 8xi5:N (3.4) BS01 CA N/A N/A P98155 39127734
    916332 8xi5:O (3.4) BS01 CA N/A N/A P98155 39127734
    916333 8xi5:P (3.4) BS01 CA N/A N/A P98155 39127734
    916334 8xi5:Q (3.4) BS01 CA N/A N/A P98155 39127734
    916335 8xi5:R (3.4) BS01 CA N/A N/A P98155 39127734
    916336 8xi5:S (3.4) BS01 CA N/A N/A P98155 39127734
    916337 8xi5:T (3.4) BS01 CA N/A N/A P98155 39127734
    916338 8xi9:A (1.85) BS01 RAP N/A GO:0003007 ... P42345
    P62942
    39031920
    916339 8xia:A (1.9) BS01 XLS 5.3.1.5 GO:0000287 ... P24300 2734296
    916340 8xia:A (1.9) BS02 MN 5.3.1.5 GO:0000287 ... P24300 2734296
    916341 8xia:A (1.9) BS03 MN 5.3.1.5 GO:0000287 ... P24300 2734296
    916342 8xib:A (2.097) BS01 CO N/A GO:0003868 ... P93836 N/A
    916343 8xib:A (2.097) BS02 OHP N/A GO:0003868 ... P93836 N/A
    916344 8xif:A (1.39) BS01 MG 3.6.4.- N/A P04305 38914567
    916345 8xif:A (1.39) BS02 MG 3.6.4.- N/A P04305 38914567
    916346 8xig:A (1.65) BS01 MG 3.6.4.- N/A A0A7H0DN89 38914567
    916347 8xig:A (1.65) BS02 MG 3.6.4.- N/A A0A7H0DN89 38914567
    916348 8xih:A (3.2) BS01 dna N/A GO:0003676 ... H1YCU5 N/A
    916349 8xih:A (3.2) BS02 dna N/A GO:0003676 ... H1YCU5 N/A
    916350 8xih:B (3.2) BS01 dna N/A GO:0003676 ... H1YCU5 N/A
    916351 8xih:B (3.2) BS02 dna N/A GO:0003676 ... H1YCU5 N/A
    916352 8xii:A (1.596) BS01 CO N/A GO:0003868 ... P93836 N/A
    916353 8xii:A (1.596) BS02 A1LVP N/A GO:0003868 ... P93836 N/A
    916354 8xij:A (3.37) BS01 PKZ N/A GO:0005783 ... P47026 39448635
    916355 8xik:A (3.55) BS01 A1LVI N/A GO:0005783 ... P47026 39448635
    916356 8xil:A (1.21) BS01 BGC N/A GO:0005975 ... Q93HT8 38863949
    916357 8xil:A (1.21) BS02 BGC N/A GO:0005975 ... Q93HT8 38863949
    916358 8xil:A (1.21) BS03 BGC N/A GO:0005975 ... Q93HT8 38863949
    916359 8xil:B (1.21) BS01 BGC N/A GO:0005975 ... Q93HT8 38863949
    916360 8xil:B (1.21) BS02 BGC N/A GO:0005975 ... Q93HT8 38863949
    916361 8xil:B (1.21) BS03 BGC N/A GO:0005975 ... Q93HT8 38863949
    916362 8xim:A (2.4) BS01 XLS 5.3.1.5 GO:0000287 ... P12851 1610791
    916363 8xim:A (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    916364 8xim:B (2.4) BS01 XLS 5.3.1.5 GO:0000287 ... P12851 1610791
    916365 8xim:B (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    916366 8xim:C (2.4) BS01 XLS 5.3.1.5 GO:0000287 ... P12851 1610791
    916367 8xim:C (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    916368 8xim:D (2.4) BS01 XLS 5.3.1.5 GO:0000287 ... P12851 1610791
    916369 8xim:D (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    916370 8xin:A (1.694) BS01 CO N/A GO:0003868 ... P93836 N/A
    916371 8xin:A (1.694) BS02 A1LVO N/A GO:0003868 ... P93836 N/A
    916372 8xio:A (2.65) BS01 A1D5D N/A GO:0004930 ... P30872 39361640
    916373 8xip:A (3.29) BS01 peptide N/A GO:0004930 ... P30872 39361640
    916374 8xiq:A (2.71) BS01 peptide N/A GO:0004930 ... P32745 39361640
    916375 8xir:A (2.52) BS01 peptide N/A GO:0004930 ... P32745 39361640
    916376 8xis:A (1.68) BS01 PO4 N/A GO:0005975 ... Q93HT8 38863949
    916377 8xis:B (1.68) BS01 PO4 N/A GO:0005975 ... Q93HT8 38863949
    916378 8xiv:A (1.6) BS01 FUD N/A N/A A0A1N7MFN7 N/A
    916379 8xiv:A (1.6) BS02 CO N/A N/A A0A1N7MFN7 N/A
    916380 8xiw:A (2.85) BS01 FE N/A GO:0016491 ... Q27RN7 N/A
    916381 8xiw:A (2.85) BS02 FE N/A GO:0016491 ... Q27RN7 N/A
    916382 8xiw:E (2.85) BS01 FE N/A GO:0016491 ... Q27RN7 N/A
    916383 8xiw:E (2.85) BS02 FE N/A GO:0016491 ... Q27RN7 N/A
    916384 8xiy:A (2.09) BS01 PLP ? GO:0003824 ... Q0C8G1 N/A
    916385 8xiy:B (2.09) BS01 PLP ? GO:0003824 ... Q0C8G1 N/A
    916386 8xj2:A (3.16) BS01 A1LVL N/A GO:0004478 ... P31153 N/A
    916387 8xj2:A (3.16) BS02 A1LVL N/A GO:0004478 ... P31153 N/A
    916388 8xj2:A (3.16) BS03 SAM N/A GO:0004478 ... P31153 N/A
    916389 8xj2:B (3.16) BS01 A1LVL N/A GO:0004478 ... P31153 N/A
    916390 8xj2:B (3.16) BS02 A1LVL N/A GO:0004478 ... P31153 N/A
    916391 8xj2:B (3.16) BS03 SAM N/A GO:0004478 ... P31153 N/A
    916392 8xj2:C (3.16) BS01 A1LVL N/A GO:0004478 ... P31153 N/A
    916393 8xj2:C (3.16) BS02 SAM N/A GO:0004478 ... P31153 N/A
    916394 8xj2:C (3.16) BS03 A1LVL N/A GO:0004478 ... P31153 N/A
    916395 8xj2:D (3.16) BS01 A1LVL N/A GO:0004478 ... P31153 N/A
    916396 8xj2:D (3.16) BS02 SAM N/A GO:0004478 ... P31153 N/A
    916397 8xj2:D (3.16) BS03 A1LVL N/A GO:0004478 ... P31153 N/A
    916398 8xj5:A (2.04) BS01 ORN N/A GO:0016747 ... Q9ZV05 N/A
    916399 8xj5:A (2.04) BS02 COA N/A GO:0016747 ... Q9ZV05 N/A
    916400 8xj5:A (2.04) BS03 ORN N/A GO:0016747 ... Q9ZV05 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).