SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    916601 8xjv:a9 (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916602 8xjv:a9 (3.6) BS02 dna N/A GO:0000786 ... P62799 39103524
    916603 8xjv:aj (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916604 8xjv:aj (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916605 8xjv:ak (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916606 8xjv:ak (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916607 8xjv:al (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916608 8xjv:al (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916609 8xjv:am (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916610 8xjv:am (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916611 8xjv:an (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916612 8xjv:an (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916613 8xjv:ao (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916614 8xjv:ao (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916615 8xjv:ap (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916616 8xjv:ap (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916617 8xjv:aq (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916618 8xjv:aq (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916619 8xjv:ar (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916620 8xjv:ar (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916621 8xjv:as (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916622 8xjv:as (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916623 8xjv:at (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916624 8xjv:at (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916625 8xjv:au (3.6) BS01 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916626 8xjv:au (3.6) BS02 dna N/A GO:0000786 ... Q6AZJ8 39103524
    916627 8xjv:av (3.6) BS01 dna N/A GO:0000786 ... P02281 39103524
    916628 8xjv:av (3.6) BS02 dna N/A GO:0000786 ... P02281 39103524
    916629 8xjv:aw (3.6) BS01 dna N/A GO:0000786 ... P02281 39103524
    916630 8xjv:aw (3.6) BS02 dna N/A GO:0000786 ... P02281 39103524
    916631 8xjv:ax (3.6) BS01 dna N/A GO:0000786 ... P02281 39103524
    916632 8xjv:ax (3.6) BS02 dna N/A GO:0000786 ... P02281 39103524
    916633 8xjv:ay (3.6) BS01 dna N/A GO:0000786 ... P02281 39103524
    916634 8xjv:ay (3.6) BS02 dna N/A GO:0000786 ... P02281 39103524
    916635 8xjv:az (3.6) BS01 dna N/A GO:0000786 ... P02281 39103524
    916636 8xjv:az (3.6) BS02 dna N/A GO:0000786 ... P02281 39103524
    916637 8xjv:b (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916638 8xjv:b (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916639 8xjv:c (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916640 8xjv:c (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916641 8xjv:d (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916642 8xjv:d (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916643 8xjv:e (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916644 8xjv:e (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916645 8xjv:f (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916646 8xjv:f (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916647 8xjv:g (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916648 8xjv:g (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916649 8xjv:h (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916650 8xjv:h (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916651 8xjv:i (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916652 8xjv:i (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916653 8xjv:j (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916654 8xjv:j (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916655 8xjv:k (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916656 8xjv:k (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916657 8xjv:l (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916658 8xjv:l (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916659 8xjv:m (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916660 8xjv:m (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916661 8xjv:n (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916662 8xjv:n (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916663 8xjv:o (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916664 8xjv:o (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916665 8xjv:p (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916666 8xjv:p (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916667 8xjv:q (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916668 8xjv:q (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916669 8xjv:r (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916670 8xjv:r (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916671 8xjv:s (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916672 8xjv:s (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916673 8xjv:t (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916674 8xjv:t (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916675 8xjv:u (3.6) BS01 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916676 8xjv:u (3.6) BS02 dna N/A GO:0000786 ... A0A310TTQ1 39103524
    916677 8xjv:v (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916678 8xjv:v (3.6) BS02 dna N/A GO:0000786 ... P62799 39103524
    916679 8xjv:w (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916680 8xjv:w (3.6) BS02 dna N/A GO:0000786 ... P62799 39103524
    916681 8xjv:x (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916682 8xjv:x (3.6) BS02 dna N/A GO:0000786 ... P62799 39103524
    916683 8xjv:y (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916684 8xjv:y (3.6) BS02 dna N/A GO:0000786 ... P62799 39103524
    916685 8xjv:z (3.6) BS01 dna N/A GO:0000786 ... P62799 39103524
    916686 8xjw:A (2.84) BS01 dna N/A GO:0003676 ... N/A 39315697
    916687 8xjw:A (2.84) BS02 rna N/A GO:0003676 ... N/A 39315697
    916688 8xjx:A (2.78) BS01 dna N/A GO:0003676 ... N/A 39315697
    916689 8xjx:A (2.78) BS02 dna N/A GO:0003676 ... N/A 39315697
    916690 8xjz:A (3.67) BS01 peptide N/A GO:0016740 ... Q0P7J9 40381618
    916691 8xjz:B (3.67) BS01 peptide N/A GO:0016740 ... Q0P7J9 40381618
    916692 8xk0:A (2.96) BS01 dna N/A GO:0003676 ... N/A 39315697
    916693 8xk0:A (2.96) BS02 dna N/A GO:0003676 ... N/A 39315697
    916694 8xk0:A (2.96) BS03 MN N/A GO:0003676 ... N/A 39315697
    916695 8xk3:A (2.76) BS01 dna N/A GO:0003676 ... N/A 39315697
    916696 8xk3:A (2.76) BS02 dna N/A GO:0003676 ... N/A 39315697
    916697 8xk3:A (2.76) BS03 dna N/A GO:0003676 ... N/A 39315697
    916698 8xk3:A (2.76) BS04 MN N/A GO:0003676 ... N/A 39315697
    916699 8xk3:A (2.76) BS05 MN N/A GO:0003676 ... N/A 39315697
    916700 8xk4:A (2.94) BS01 dna N/A GO:0003676 ... N/A 39315697
    916701 8xk4:A (2.94) BS02 dna N/A GO:0003676 ... N/A 39315697
    916702 8xk4:A (2.94) BS03 DC N/A GO:0003676 ... N/A 39315697
    916703 8xk4:A (2.94) BS04 MN N/A GO:0003676 ... N/A 39315697
    916704 8xk7:A (2.0) BS01 dna N/A GO:0001882 ... P19821 39147125
    916705 8xk7:A (2.0) BS02 dna N/A GO:0001882 ... P19821 39147125
    916706 8xk7:A (2.0) BS03 PO4 N/A GO:0001882 ... P19821 39147125
    916707 8xk7:A (2.0) BS04 PO4 N/A GO:0001882 ... P19821 39147125
    916708 8xk9:A (2.4) BS01 dna N/A GO:0001882 ... P52028 39147125
    916709 8xk9:A (2.4) BS02 dna N/A GO:0001882 ... P52028 39147125
    916710 8xk9:A (2.4) BS03 MG N/A GO:0001882 ... P52028 39147125
    916711 8xk9:A (2.4) BS04 MG N/A GO:0001882 ... P52028 39147125
    916712 8xk9:A (2.4) BS05 A1LWE N/A GO:0001882 ... P52028 39147125
    916713 8xk9:A (2.4) BS06 PO4 N/A GO:0001882 ... P52028 39147125
    916714 8xk9:D (2.4) BS01 dna N/A GO:0001882 ... P52028 39147125
    916715 8xk9:D (2.4) BS02 dna N/A GO:0001882 ... P52028 39147125
    916716 8xk9:D (2.4) BS03 MG N/A GO:0001882 ... P52028 39147125
    916717 8xk9:D (2.4) BS04 MG N/A GO:0001882 ... P52028 39147125
    916718 8xk9:D (2.4) BS05 A1LWE N/A GO:0001882 ... P52028 39147125
    916719 8xk9:D (2.4) BS06 PO4 N/A GO:0001882 ... P52028 39147125
    916720 8xkc:A (2.18) BS01 peptide N/A N/A A0A0G2JPD3 38885041
    916721 8xkd:A (1.73) BS01 UDP N/A N/A A0A5D0ENI3 39265897
    916722 8xkd:B (1.73) BS01 UDP N/A N/A A0A5D0ENI3 39265897
    916723 8xke:A (1.92) BS01 peptide N/A N/A A0A0G2JL56 38885041
    916724 8xkf:A (2.5) BS01 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916725 8xkf:A (2.5) BS02 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916726 8xkf:A (2.5) BS03 CDP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916727 8xkf:B (2.5) BS01 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916728 8xkf:B (2.5) BS02 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916729 8xkf:C (2.5) BS01 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916730 8xkf:C (2.5) BS02 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916731 8xkf:C (2.5) BS03 CDP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916732 8xkf:D (2.5) BS01 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916733 8xkf:D (2.5) BS02 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916734 8xkf:D (2.5) BS03 ZN 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916735 8xkf:D (2.5) BS04 CDP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916736 8xkf:E (2.5) BS01 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916737 8xkf:E (2.5) BS02 CDP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916738 8xkf:E (2.5) BS03 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916739 8xkf:F (2.5) BS01 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916740 8xkf:F (2.5) BS02 CTP 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916741 8xkf:F (2.5) BS03 C5P 2.7.7.60
    4.6.1.12
    GO:0003824 ... O25664 38537721
    916742 8xkh:A (3.87) BS01 ZN N/A GO:0003151 ... P11716 39428398
    916743 8xkh:A (3.87) BS02 CA N/A GO:0003151 ... P11716 39428398
    916744 8xkh:A (3.87) BS03 ATP N/A GO:0003151 ... P11716 39428398
    916745 8xkh:A (3.87) BS04 CFF N/A GO:0003151 ... P11716 39428398
    916746 8xkh:A (3.87) BS05 A1LV1 N/A GO:0003151 ... P11716 39428398
    916747 8xkh:B (3.87) BS01 ZN N/A GO:0003151 ... P11716 39428398
    916748 8xkh:B (3.87) BS02 CA N/A GO:0003151 ... P11716 39428398
    916749 8xkh:B (3.87) BS03 ATP N/A GO:0003151 ... P11716 39428398
    916750 8xkh:B (3.87) BS04 CFF N/A GO:0003151 ... P11716 39428398
    916751 8xkh:B (3.87) BS05 A1LV1 N/A GO:0003151 ... P11716 39428398
    916752 8xkh:C (3.87) BS01 ZN N/A GO:0003151 ... P11716 39428398
    916753 8xkh:C (3.87) BS02 CA N/A GO:0003151 ... P11716 39428398
    916754 8xkh:C (3.87) BS03 ATP N/A GO:0003151 ... P11716 39428398
    916755 8xkh:C (3.87) BS04 CFF N/A GO:0003151 ... P11716 39428398
    916756 8xkh:C (3.87) BS05 A1LV1 N/A GO:0003151 ... P11716 39428398
    916757 8xkh:D (3.87) BS01 ZN N/A GO:0003151 ... P11716 39428398
    916758 8xkh:D (3.87) BS02 CA N/A GO:0003151 ... P11716 39428398
    916759 8xkh:D (3.87) BS03 ATP N/A GO:0003151 ... P11716 39428398
    916760 8xkh:D (3.87) BS04 CFF N/A GO:0003151 ... P11716 39428398
    916761 8xkh:D (3.87) BS05 A1LV1 N/A GO:0003151 ... P11716 39428398
    916762 8xkl:0 (2.84) BS01 CLA N/A GO:0009765 ... N/A 38806516
    916763 8xkl:0 (2.84) BS02 CLA N/A GO:0009765 ... N/A 38806516
    916764 8xkl:0 (2.84) BS03 CLA N/A GO:0009765 ... N/A 38806516
    916765 8xkl:0 (2.84) BS04 CLA N/A GO:0009765 ... N/A 38806516
    916766 8xkl:0 (2.84) BS05 CLA N/A GO:0009765 ... N/A 38806516
    916767 8xkl:0 (2.84) BS06 CLA N/A GO:0009765 ... N/A 38806516
    916768 8xkl:0 (2.84) BS07 CLA N/A GO:0009765 ... N/A 38806516
    916769 8xkl:0 (2.84) BS08 CLA N/A GO:0009765 ... N/A 38806516
    916770 8xkl:0 (2.84) BS09 CLA N/A GO:0009765 ... N/A 38806516
    916771 8xkl:0 (2.84) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    916772 8xkl:0 (2.84) BS11 CLA N/A GO:0009765 ... N/A 38806516
    916773 8xkl:0 (2.84) BS12 CLA N/A GO:0009765 ... N/A 38806516
    916774 8xkl:0 (2.84) BS13 CLA N/A GO:0009765 ... N/A 38806516
    916775 8xkl:0 (2.84) BS14 IHT N/A GO:0009765 ... N/A 38806516
    916776 8xkl:0 (2.84) BS15 II0 N/A GO:0009765 ... N/A 38806516
    916777 8xkl:0 (2.84) BS16 II0 N/A GO:0009765 ... N/A 38806516
    916778 8xkl:0 (2.84) BS17 IHT N/A GO:0009765 ... N/A 38806516
    916779 8xkl:0 (2.84) BS18 II0 N/A GO:0009765 ... N/A 38806516
    916780 8xkl:0 (2.84) BS19 II0 N/A GO:0009765 ... N/A 38806516
    916781 8xkl:0 (2.84) BS20 CLA N/A GO:0009765 ... N/A 38806516
    916782 8xkl:7 (2.84) BS01 CLA N/A GO:0009765 ... N/A 38806516
    916783 8xkl:7 (2.84) BS02 CLA N/A GO:0009765 ... N/A 38806516
    916784 8xkl:7 (2.84) BS03 CLA N/A GO:0009765 ... N/A 38806516
    916785 8xkl:7 (2.84) BS04 CLA N/A GO:0009765 ... N/A 38806516
    916786 8xkl:7 (2.84) BS05 CLA N/A GO:0009765 ... N/A 38806516
    916787 8xkl:7 (2.84) BS06 CLA N/A GO:0009765 ... N/A 38806516
    916788 8xkl:7 (2.84) BS07 CLA N/A GO:0009765 ... N/A 38806516
    916789 8xkl:7 (2.84) BS08 CLA N/A GO:0009765 ... N/A 38806516
    916790 8xkl:7 (2.84) BS09 CLA N/A GO:0009765 ... N/A 38806516
    916791 8xkl:7 (2.84) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    916792 8xkl:7 (2.84) BS11 CLA N/A GO:0009765 ... N/A 38806516
    916793 8xkl:7 (2.84) BS12 CLA N/A GO:0009765 ... N/A 38806516
    916794 8xkl:7 (2.84) BS13 CLA N/A GO:0009765 ... N/A 38806516
    916795 8xkl:7 (2.84) BS14 II0 N/A GO:0009765 ... N/A 38806516
    916796 8xkl:7 (2.84) BS15 II3 N/A GO:0009765 ... N/A 38806516
    916797 8xkl:7 (2.84) BS16 II0 N/A GO:0009765 ... N/A 38806516
    916798 8xkl:7 (2.84) BS17 II0 N/A GO:0009765 ... N/A 38806516
    916799 8xkl:7 (2.84) BS18 IHT N/A GO:0009765 ... N/A 38806516
    916800 8xkl:7 (2.84) BS19 II0 N/A GO:0009765 ... N/A 38806516

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).