SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    91601 2izs:A (1.95) BS01 BRQ 2.7.11.1 GO:0004672 ... Q9Y6M4 N/A
    91602 2izt:A (2.0) BS01 23D 2.7.11.1 GO:0004672 ... Q9Y6M4 N/A
    91603 2izu:A (1.85) BS01 P01 2.7.11.1 GO:0004672 ... Q9Y6M4 N/A
    91604 2izx:A (1.3) BS01 peptide 2.7.11.11 N/A P13861 17081989
    91605 2izx:B (1.3) BS01 peptide 2.7.11.11 N/A P13861 17081989
    91606 2izz:A (1.95) BS01 NAD 1.5.1.2 GO:0004735 ... P32322 N/A
    91607 2izz:B (1.95) BS01 NAD 1.5.1.2 GO:0004735 ... P32322 N/A
    91608 2izz:C (1.95) BS01 NAD 1.5.1.2 GO:0004735 ... P32322 N/A
    91609 2izz:D (1.95) BS01 NAD 1.5.1.2 GO:0004735 ... P32322 N/A
    91610 2izz:E (1.95) BS01 NAD 1.5.1.2 GO:0004735 ... P32322 N/A
    91611 2j07:A (1.95) BS01 FAD 4.1.99.3 GO:0003677 ... P61497 17051659
    91612 2j07:A (1.95) BS02 HDF 4.1.99.3 GO:0003677 ... P61497 17051659
    91613 2j08:A (2.61) BS01 FAD 4.1.99.3 GO:0003677 ... P61497 17051659
    91614 2j08:A (2.61) BS02 IRF 4.1.99.3 GO:0003677 ... P61497 17051659
    91615 2j09:A (2.0) BS01 FAD 4.1.99.3 GO:0003677 ... P61497 17051659
    91616 2j09:A (2.0) BS02 FMN 4.1.99.3 GO:0003677 ... P61497 17051659
    91617 2j0b:A (2.1) BS01 MN 2.4.1.222 GO:0016020 ... O09008 16964258
    91618 2j0b:A (2.1) BS02 UDP 2.4.1.222 GO:0016020 ... O09008 16964258
    91619 2j0d:A (2.75) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 16954191
    91620 2j0d:A (2.75) BS02 ERY 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 16954191 BindingDB: IC50=190nM
    91621 2j0d:B (2.75) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 16954191
    91622 2j0e:A (2.1) BS01 ZN 3.1.1.31 GO:0005737 ... Q9GRG6 17196981
    91623 2j0e:B (2.1) BS01 ZN 3.1.1.31 GO:0005737 ... Q9GRG6 17196981
    91624 2j0f:A (2.31) BS01 TDR 2.4.2.4 GO:0004645 ... P19971 16803458
    91625 2j0f:B (2.31) BS01 TDR 2.4.2.4 GO:0004645 ... P19971 16803458
    91626 2j0f:C (2.31) BS01 TDR 2.4.2.4 GO:0004645 ... P19971 16803458
    91627 2j0g:A (2.85) BS01 CA ? N/A Q15485 17215869
    91628 2j0g:B (2.85) BS01 CA ? N/A Q15485 17215869
    91629 2j0g:C (2.85) BS01 CA ? N/A Q15485 17215869
    91630 2j0g:D (2.85) BS01 CA ? N/A Q15485 17215869
    91631 2j0g:E (2.85) BS01 CA ? N/A Q15485 17215869
    91632 2j0g:F (2.85) BS01 MAN ? N/A Q15485 17215869
    91633 2j0g:F (2.85) BS02 CA ? N/A Q15485 17215869
    91634 2j0h:A (2.85) BS01 CA ? N/A Q15485 17215869
    91635 2j0h:A (2.85) BS02 ACH ? N/A Q15485 17215869
    91636 2j0h:B (2.85) BS01 ACH ? N/A Q15485 17215869
    91637 2j0h:B (2.85) BS02 CA ? N/A Q15485 17215869
    91638 2j0h:C (2.85) BS01 ACH ? N/A Q15485 17215869
    91639 2j0h:C (2.85) BS02 CA ? N/A Q15485 17215869
    91640 2j0h:D (2.85) BS01 CA ? N/A Q15485 17215869
    91641 2j0h:E (2.85) BS01 ACH ? N/A Q15485 17215869
    91642 2j0h:E (2.85) BS02 CA ? N/A Q15485 17215869
    91643 2j0h:F (2.85) BS01 ACH ? N/A Q15485 17215869
    91644 2j0h:F (2.85) BS02 CA ? N/A Q15485 17215869
    91645 2j0j:A (2.8) BS01 4ST 2.7.10.2 GO:0004672 ... Q00944 17574028
    91646 2j0k:A (3.0) BS01 4ST 2.7.10.2 GO:0004672 ... Q00944 17574028
    91647 2j0k:B (3.0) BS01 4ST 2.7.10.2 GO:0004672 ... Q00944 17574028
    91648 2j0l:A (2.3) BS01 ANP 2.7.10.2 GO:0004672 ... Q00944 17574028
    91649 2j0m:B (2.8) BS01 4ST 2.7.10.2 GO:0004672 ... Q00944 17574028
    91650 2j0p:A (1.7) BS01 HEM ? GO:0006826 ... P31517 16943192
    91651 2j0q:A (3.2) BS01 rna 3.6.4.13 GO:0000184 ... P38919 16923391
    91652 2j0q:A (3.2) BS02 MG 3.6.4.13 GO:0000184 ... P38919 16923391
    91653 2j0q:A (3.2) BS03 ANP 3.6.4.13 GO:0000184 ... P38919 16923391
    91654 2j0q:B (3.2) BS01 rna 3.6.4.13 GO:0000184 ... P38919 16923391
    91655 2j0q:B (3.2) BS02 MG 3.6.4.13 GO:0000184 ... P38919 16923391
    91656 2j0q:B (3.2) BS03 ANP 3.6.4.13 GO:0000184 ... P38919 16923391
    91657 2j0s:A (2.21) BS01 rna 3.6.4.13 GO:0000184 ... P38919 16923391
    91658 2j0s:A (2.21) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 16923391
    91659 2j0t:A (2.54) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91660 2j0t:A (2.54) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91661 2j0t:A (2.54) BS03 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91662 2j0t:A (2.54) BS04 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91663 2j0t:A (2.54) BS05 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91664 2j0t:B (2.54) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91665 2j0t:B (2.54) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91666 2j0t:B (2.54) BS03 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91667 2j0t:B (2.54) BS04 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91668 2j0t:B (2.54) BS05 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91669 2j0t:C (2.54) BS01 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91670 2j0t:C (2.54) BS02 ZN 3.4.24.7 GO:0004222 ... P03956 17050530
    91671 2j0t:C (2.54) BS03 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91672 2j0t:C (2.54) BS04 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91673 2j0t:C (2.54) BS05 CA 3.4.24.7 GO:0004222 ... P03956 17050530
    91674 2j0u:A (3.0) BS01 peptide 3.6.4.13 GO:0000184 ... P38919 16923391
    91675 2j0v:A (1.78) BS01 GDP ? GO:0003924 ... O82480 17005216
    91676 2j0v:A (1.78) BS02 MG ? GO:0003924 ... O82480 17005216
    91677 2j0v:A (1.78) BS03 GDP ? GO:0003924 ... O82480 17005216
    91678 2j0v:B (1.78) BS01 GDP ? GO:0003924 ... O82480 17005216
    91679 2j0v:B (1.78) BS02 GDP ? GO:0003924 ... O82480 17005216
    91680 2j0v:B (1.78) BS03 MG ? GO:0003924 ... O82480 17005216
    91681 2j0v:C (1.78) BS01 GDP ? GO:0003924 ... O82480 17005216
    91682 2j0v:C (1.78) BS02 MG ? GO:0003924 ... O82480 17005216
    91683 2j0v:C (1.78) BS03 GDP ? GO:0003924 ... O82480 17005216
    91684 2j0v:D (1.78) BS01 GDP ? GO:0003924 ... O82480 17005216
    91685 2j0v:D (1.78) BS02 GDP ? GO:0003924 ... O82480 17005216
    91686 2j0v:D (1.78) BS03 MG ? GO:0003924 ... O82480 17005216
    91687 2j0w:A (2.5) BS01 ASP 2.7.2.4 GO:0004072 ... P08660 16905770
    91688 2j0w:A (2.5) BS02 ADP 2.7.2.4 GO:0004072 ... P08660 16905770
    91689 2j0x:A (2.8) BS01 ASP 2.7.2.4 GO:0004072 ... P08660 16905770
    91690 2j0x:A (2.8) BS02 LYS 2.7.2.4 GO:0004072 ... P08660 16905770
    91691 2j0x:A (2.8) BS03 LYS 2.7.2.4 GO:0004072 ... P08660 16905770
    91692 2j0x:B (2.8) BS01 LYS 2.7.2.4 GO:0004072 ... P08660 16905770
    91693 2j0x:B (2.8) BS02 LYS 2.7.2.4 GO:0004072 ... P08660 16905770
    91694 2j0y:B (2.35) BS01 CA ? N/A Q15485 17215869
    91695 2j0y:C (2.35) BS01 BGC ? N/A Q15485 17215869
    91696 2j0y:C (2.35) BS02 BGC ? N/A Q15485 17215869
    91697 2j0y:C (2.35) BS03 CA ? N/A Q15485 17215869
    91698 2j0y:E (2.35) BS01 CA ? N/A Q15485 17215869
    91699 2j0y:F (2.35) BS01 BGC ? N/A Q15485 17215869
    91700 2j0y:F (2.35) BS02 BGC ? N/A Q15485 17215869
    91701 2j0y:F (2.35) BS03 BGC ? N/A Q15485 17215869
    91702 2j0y:F (2.35) BS04 CA ? N/A Q15485 17215869
    91703 2j13:A (1.7) BS01 ZN 3.5.1.- GO:0005975 ... A0A6H3ACS3 17063474
    91704 2j13:A (1.7) BS02 ZN 3.5.1.- GO:0005975 ... A0A6H3ACS3 17063474
    91705 2j14:A (2.8) BS01 GNI ? GO:0003677 ... Q03181 16931011 BindingDB: EC50=70nM
    91706 2j14:B (2.8) BS01 GNI ? GO:0003677 ... Q03181 16931011 BindingDB: EC50=70nM
    91707 2j16:B (2.7) BS01 MG 3.1.3.48 GO:0006470 ... P40479 17495930
    91708 2j17:A (2.84) BS01 MG 3.1.3.48 GO:0006470 ... P40479 17495930
    91709 2j17:A (2.84) BS02 MG 3.1.3.48 GO:0006470 ... P40479 17495930
    91710 2j17:A (2.84) BS03 PTR 3.1.3.48 GO:0006470 ... P40479 17495930
    91711 2j17:B (2.84) BS01 MG 3.1.3.48 GO:0006470 ... P40479 17495930
    91712 2j17:B (2.84) BS02 PTR 3.1.3.48 GO:0006470 ... P40479 17495930
    91713 2j18:A (1.75) BS01 MN 1.11.1.10 GO:0004601 ... P04963 17211068
    91714 2j18:A (1.75) BS02 HEM 1.11.1.10 GO:0004601 ... P04963 17211068
    91715 2j18:A (1.75) BS03 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91716 2j18:A (1.75) BS04 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91717 2j18:A (1.75) BS05 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91718 2j18:A (1.75) BS06 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91719 2j18:A (1.75) BS07 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91720 2j18:A (1.75) BS08 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91721 2j18:A (1.75) BS09 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91722 2j19:A (1.75) BS01 MN 1.11.1.10 GO:0004601 ... P04963 17211068
    91723 2j19:A (1.75) BS02 HEM 1.11.1.10 GO:0004601 ... P04963 17211068
    91724 2j19:A (1.75) BS03 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91725 2j19:A (1.75) BS04 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91726 2j19:A (1.75) BS05 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91727 2j19:A (1.75) BS06 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91728 2j19:A (1.75) BS07 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91729 2j19:A (1.75) BS08 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91730 2j19:A (1.75) BS09 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91731 2j19:A (1.75) BS10 MAN 1.11.1.10 GO:0004601 ... P04963 17211068
    91732 2j1a:A (1.49) BS01 GAL 3.2.1.169 N/A Q0TR53 16990278 MOAD: Kd=980uM
    91733 2j1a:A (1.49) BS02 CA 3.2.1.169 N/A Q0TR53 16990278
    91734 2j1e:A (2.4) BS01 GAL 3.2.1.169 N/A Q0TR53 16990278
    91735 2j1e:A (2.4) BS02 CA 3.2.1.169 N/A Q0TR53 16990278
    91736 2j1g:B (1.95) BS01 FUC ? N/A Q15485 17215869
    91737 2j1g:B (1.95) BS02 CA ? N/A Q15485 17215869
    91738 2j1g:C (1.95) BS01 CA ? N/A Q15485 17215869
    91739 2j1g:D (1.95) BS01 CA ? N/A Q15485 17215869
    91740 2j1g:E (1.95) BS01 CA ? N/A Q15485 17215869
    91741 2j1g:F (1.95) BS01 SC2 ? N/A Q15485 17215869
    91742 2j1g:F (1.95) BS02 CA ? N/A Q15485 17215869
    91743 2j1l:A (2.5) BS01 GDP 3.6.5.2 GO:0000139 ... O00212 N/A
    91744 2j1m:A (1.7) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91745 2j1m:A (1.7) BS02 ZN 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91746 2j1m:A (1.7) BS03 ZN 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91747 2j1m:A (1.7) BS04 ZN 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91748 2j1m:B (1.7) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91749 2j1m:B (1.7) BS02 ZN 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91750 2j1m:B (1.7) BS03 ZN 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 17429965
    91751 2j1n:A (2.0) BS01 MG ? GO:0001618 ... P06996 16949612
    91752 2j1n:B (2.0) BS01 MG ? GO:0001618 ... P06996 16949612
    91753 2j1n:C (2.0) BS01 MG ? GO:0001618 ... P06996 16949612
    91754 2j1p:A (1.8) BS01 GRG 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29
    GO:0004659 ... Q43133 17176041
    91755 2j1r:A (1.54) BS01 CA ? N/A A0A0H2US34 16987809
    91756 2j1r:B (1.54) BS01 CA ? N/A A0A0H2US34 16987809
    91757 2j1s:A (1.5) BS01 CA ? N/A A0A0H2US34 16987809
    91758 2j1s:A (1.5) BS02 FUL ? N/A A0A0H2US34 16987809
    91759 2j1s:B (1.5) BS01 CA ? N/A A0A0H2US34 16987809
    91760 2j1s:B (1.5) BS02 FUL ? N/A A0A0H2US34 16987809
    91761 2j1t:A (1.6) BS01 FUC ? N/A A0A0H2US34 16987809
    91762 2j1t:A (1.6) BS02 CA ? N/A A0A0H2US34 16987809
    91763 2j1t:B (1.6) BS01 CA ? N/A A0A0H2US34 16987809
    91764 2j1u:A (1.8) BS01 FUC ? N/A A0A0H2US34 16987809
    91765 2j1u:A (1.8) BS02 CA ? N/A A0A0H2US34 16987809
    91766 2j1u:B (1.8) BS01 CA ? N/A A0A0H2US34 16987809
    91767 2j1v:A (1.45) BS01 FUC ? N/A A0A0H2US34 16987809
    91768 2j1v:A (1.45) BS02 CA ? N/A A0A0H2US34 16987809
    91769 2j1v:B (1.45) BS01 CA ? N/A A0A0H2US34 16987809
    91770 2j1w:A (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91771 2j1w:B (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91772 2j1x:A (1.65) BS01 ZN ? GO:0000976 ... P04637 17015838
    91773 2j1x:B (1.65) BS01 ZN ? GO:0000976 ... P04637 17015838
    91774 2j1y:A (1.69) BS01 ZN ? GO:0000976 ... P04637 17015838
    91775 2j1y:B (1.69) BS01 ZN ? GO:0000976 ... P04637 17015838
    91776 2j1y:C (1.69) BS01 ZN ? GO:0000976 ... P04637 17015838
    91777 2j1y:D (1.69) BS01 ZN ? GO:0000976 ... P04637 17015838
    91778 2j1z:A (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91779 2j1z:B (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91780 2j20:A (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91781 2j20:B (1.8) BS01 ZN ? GO:0000976 ... P04637 17015838
    91782 2j21:A (1.6) BS01 ZN ? GO:0000976 ... P04637 17015838
    91783 2j21:B (1.6) BS01 ZN ? GO:0000976 ... P04637 17015838
    91784 2j22:A (1.8) BS01 CA ? N/A A0A0H2US34 16987809
    91785 2j27:A (1.15) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 17176070 MOAD: Ki=0.3mM
    91786 2j27:B (1.15) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 17176070 MOAD: Ki=0.3mM
    91787 2j28:0 (9.5) BS01 rna ? GO:0000027 ... P0A7N4 17086193
    91788 2j28:1 (9.5) BS01 rna ? GO:0000027 ... P0A7N9 17086193
    91789 2j28:2 (9.5) BS01 rna ? GO:0002181 ... P0A7P5 17086193
    91790 2j28:3 (9.5) BS01 rna ? GO:0002181 ... P0A7Q1 17086193
    91791 2j28:4 (9.5) BS01 rna ? GO:0002181 ... P0A7Q6 17086193
    91792 2j28:9 (9.5) BS01 peptide 3.6.5.4 GO:0003723 ... P0AGD7 17086193
    91793 2j28:9 (9.5) BS02 rna 3.6.5.4 GO:0003723 ... P0AGD7 17086193
    91794 2j28:9 (9.5) BS03 rna 3.6.5.4 GO:0003723 ... P0AGD7 17086193
    91795 2j28:C (9.5) BS01 rna ? GO:0000027 ... P60422 17086193
    91796 2j28:D (9.5) BS01 rna ? GO:0000027 ... P60438 17086193
    91797 2j28:E (9.5) BS01 rna ? GO:0001070 ... P60723 17086193
    91798 2j28:F (9.5) BS01 rna ? GO:0000027 ... P62399 17086193
    91799 2j28:F (9.5) BS02 rna ? GO:0000027 ... P62399 17086193
    91800 2j28:G (9.5) BS01 rna ? GO:0000027 ... P0AG55 17086193

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).