SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    918401 8zk2:f (2.65) BS05 CRT N/A N/A Q6XBJ8 39702771
    918402 8zk2:g (2.65) BS01 BCL N/A N/A Q6XBJ9 39702771
    918403 8zk2:g (2.65) BS02 BCL N/A N/A Q6XBJ9 39702771
    918404 8zk2:g (2.65) BS03 BCL N/A N/A Q6XBJ9 39702771
    918405 8zk2:g (2.65) BS04 CRT N/A N/A Q6XBJ9 39702771
    918406 8zk2:h (2.65) BS01 CRT N/A N/A Q6XBJ8 39702771
    918407 8zk2:h (2.65) BS02 BCL N/A N/A Q6XBJ8 39702771
    918408 8zk2:h (2.65) BS03 BCL N/A N/A Q6XBJ8 39702771
    918409 8zk2:h (2.65) BS04 BCL N/A N/A Q6XBJ8 39702771
    918410 8zk2:h (2.65) BS05 CRT N/A N/A Q6XBJ8 39702771
    918411 8zk2:h (2.65) BS06 CRT N/A N/A Q6XBJ8 39702771
    918412 8zk2:i (2.65) BS01 BCL N/A N/A Q6XBJ9 39702771
    918413 8zk2:i (2.65) BS02 CRT N/A N/A Q6XBJ9 39702771
    918414 8zk2:i (2.65) BS03 BCL N/A N/A Q6XBJ9 39702771
    918415 8zk2:j (2.65) BS01 CRT N/A N/A Q6XBJ8 39702771
    918416 8zk2:j (2.65) BS02 BCL N/A N/A Q6XBJ8 39702771
    918417 8zk2:j (2.65) BS03 CRT N/A N/A Q6XBJ8 39702771
    918418 8zk2:j (2.65) BS04 CRT N/A N/A Q6XBJ8 39702771
    918419 8zk2:j (2.65) BS05 BCL N/A N/A Q6XBJ8 39702771
    918420 8zk2:j (2.65) BS06 BCL N/A N/A Q6XBJ8 39702771
    918421 8zk2:j (2.65) BS07 8K6 N/A N/A Q6XBJ8 39702771
    918422 8zkc:A (2.85) BS01 MG ? GO:0005524 ... P0AF08 38797154
    918423 8zkd:A (2.05) BS01 ANP N/A GO:0004672 ... Q04912 N/A
    918424 8zkd:A (2.05) BS02 MG N/A GO:0004672 ... Q04912 N/A
    918425 8zkk:B (3.6) BS01 peptide N/A N/A N/A 39471801
    918426 8zkm:B (6.7) BS01 peptide N/A N/A N/A 39471801
    918427 8zkm:C (6.7) BS01 peptide N/A N/A N/A 39471801
    918428 8zl2:A (2.8) BS01 4DS N/A N/A Q9VVT2 N/A
    918429 8zl3:A (2.9) BS01 4DS N/A N/A Q9VVT2 N/A
    918430 8zl3:B (2.9) BS01 4DS N/A N/A Q9VVT2 N/A
    918431 8zle:A (3.35) BS01 CLR N/A GO:0005452 ... P04920
    P48751
    39033175
    918432 8zle:A (3.35) BS02 Y01 N/A GO:0005452 ... P04920
    P48751
    39033175
    918433 8zle:A (3.35) BS03 PT5 N/A GO:0005452 ... P04920
    P48751
    39033175
    918434 8zle:A (3.35) BS04 PT5 N/A GO:0005452 ... P04920
    P48751
    39033175
    918435 8zle:B (3.35) BS01 PT5 N/A GO:0005452 ... P04920
    P48751
    39033175
    918436 8zle:B (3.35) BS02 CLR N/A GO:0005452 ... P04920
    P48751
    39033175
    918437 8zle:B (3.35) BS03 Y01 N/A GO:0005452 ... P04920
    P48751
    39033175
    918438 8zli:A (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918439 8zli:B (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918440 8zli:C (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918441 8zli:D (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918442 8zli:E (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918443 8zli:E (3.4) BS02 A1L13 N/A GO:0005737 ... P37840 39172784
    918444 8zli:E (3.4) BS03 A1L13 N/A GO:0005737 ... P37840 39172784
    918445 8zli:F (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918446 8zli:F (3.4) BS02 A1L13 N/A GO:0005737 ... P37840 39172784
    918447 8zli:F (3.4) BS03 A1L13 N/A GO:0005737 ... P37840 39172784
    918448 8zli:I (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918449 8zli:J (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918450 8zli:J (3.4) BS02 A1L13 N/A GO:0005737 ... P37840 39172784
    918451 8zli:K (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918452 8zli:L (3.4) BS01 A1L13 N/A GO:0005737 ... P37840 39172784
    918453 8zli:L (3.4) BS02 A1L13 N/A GO:0005737 ... P37840 39172784
    918454 8zlo:A (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918455 8zlo:A (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918456 8zlo:A (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918457 8zlo:B (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918458 8zlo:C (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918459 8zlo:C (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918460 8zlo:C (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918461 8zlo:D (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918462 8zlo:E (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918463 8zlo:E (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918464 8zlo:E (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918465 8zlo:F (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918466 8zlo:F (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918467 8zlo:F (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918468 8zlo:G (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918469 8zlo:G (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918470 8zlo:G (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918471 8zlo:G (3.1) BS04 1KI N/A GO:0005737 ... P37840 39172784
    918472 8zlo:H (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918473 8zlo:H (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918474 8zlo:H (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918475 8zlo:I (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918476 8zlo:I (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918477 8zlo:I (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918478 8zlo:I (3.1) BS04 1KI N/A GO:0005737 ... P37840 39172784
    918479 8zlo:J (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918480 8zlo:J (3.1) BS02 1KI N/A GO:0005737 ... P37840 39172784
    918481 8zlo:J (3.1) BS03 1KI N/A GO:0005737 ... P37840 39172784
    918482 8zlo:O (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918483 8zlo:T (3.1) BS01 1KI N/A GO:0005737 ... P37840 39172784
    918484 8zlu:B (2.47) BS01 rna N/A GO:0051607 ... A0A1V6F8C5 N/A
    918485 8zlu:B (2.47) BS02 MG N/A GO:0051607 ... A0A1V6F8C5 N/A
    918486 8zlu:C (2.47) BS01 rna N/A N/A A0A1V6F8D1 N/A
    918487 8zlu:C (2.47) BS02 MG N/A N/A A0A1V6F8D1 N/A
    918488 8zlu:D (2.47) BS01 rna N/A GO:0016787 ... A0A1V6F8C4 N/A
    918489 8zlu:F (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918490 8zlu:G (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918491 8zlu:H (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918492 8zlu:I (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918493 8zlu:J (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918494 8zlu:K (2.47) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918495 8zly:A (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918496 8zly:A (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918497 8zly:A (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918498 8zly:A (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918499 8zly:B (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918500 8zly:B (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918501 8zly:B (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918502 8zly:B (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918503 8zly:C (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918504 8zly:C (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918505 8zly:C (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918506 8zly:C (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918507 8zly:D (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918508 8zly:D (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918509 8zly:D (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918510 8zly:D (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918511 8zly:E (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918512 8zly:E (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918513 8zly:E (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918514 8zly:E (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918515 8zly:F (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918516 8zly:F (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918517 8zly:F (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918518 8zly:F (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918519 8zly:G (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918520 8zly:G (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918521 8zly:G (1.89) BS03 UDP N/A GO:0000287 ... Q8DQ84 39009072
    918522 8zly:G (1.89) BS04 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918523 8zly:H (1.89) BS01 FBP N/A GO:0000287 ... Q8DQ84 39009072
    918524 8zly:H (1.89) BS02 MG N/A GO:0000287 ... Q8DQ84 39009072
    918525 8zly:H (1.89) BS03 OXL N/A GO:0000287 ... Q8DQ84 39009072
    918526 8zlz:B (1.67) BS01 peptide N/A N/A Q8YXC3 39172695
    918527 8zm1:A (2.35) BS01 A1L16 N/A GO:0004672 ... Q15119 38844173
    918528 8zm2:A (2.34) BS01 A1L17 N/A GO:0004672 ... Q15119 38844173
    918529 8zm3:B (3.1) BS01 rna N/A GO:0051607 ... A0A1V6F8C5 N/A
    918530 8zm3:B (3.1) BS02 MG N/A GO:0051607 ... A0A1V6F8C5 N/A
    918531 8zm3:C (3.1) BS01 rna N/A N/A A0A1V6F8D1 N/A
    918532 8zm3:C (3.1) BS02 MG N/A N/A A0A1V6F8D1 N/A
    918533 8zm3:D (3.1) BS01 rna N/A GO:0016787 ... A0A1V6F8C4 N/A
    918534 8zm3:F (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918535 8zm3:G (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918536 8zm3:H (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918537 8zm3:I (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918538 8zm3:J (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918539 8zm3:K (3.1) BS01 rna N/A N/A A0A1V6F8B5 N/A
    918540 8zm4:A (1.4) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    918541 8zm4:A (1.4) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918542 8zm4:A (1.4) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918543 8zm4:A (1.4) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918544 8zm4:A (1.4) BS05 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918545 8zm4:A (1.4) BS06 ILE 3.4.24.27 GO:0004222 ... P00800 N/A
    918546 8zm4:A (1.4) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    918547 8zm5:A (1.4) BS01 ILE 3.4.24.27 GO:0004222 ... P00800 N/A
    918548 8zm5:A (1.4) BS02 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    918549 8zm5:A (1.4) BS03 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    918550 8zm5:A (1.4) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918551 8zm5:A (1.4) BS05 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918552 8zm5:A (1.4) BS06 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918553 8zm5:A (1.4) BS07 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918554 8zm6:A (1.4) BS01 ILE 3.4.24.27 GO:0004222 ... P00800 N/A
    918555 8zm6:A (1.4) BS02 LYS 3.4.24.27 GO:0004222 ... P00800 N/A
    918556 8zm6:A (1.4) BS03 ZN 3.4.24.27 GO:0004222 ... P00800 N/A
    918557 8zm6:A (1.4) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918558 8zm6:A (1.4) BS05 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918559 8zm6:A (1.4) BS06 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918560 8zm6:A (1.4) BS07 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    918561 8zm8:A (3.0) BS01 A1L1X N/A N/A O60885 39602227
    918562 8zm8:B (3.0) BS01 A1L1X N/A N/A O60885 39602227
    918563 8zm8:C (3.0) BS01 A1L1X N/A N/A O60885 39602227
    918564 8zmb:A (2.79) BS01 A1L0Y N/A N/A O60885 39602227
    918565 8zmb:B (2.79) BS01 A1L0Y N/A N/A O60885 39602227
    918566 8zmb:C (2.79) BS01 A1L0Y N/A N/A O60885 39602227
    918567 8zmf:A (3.6) BS01 A1L10 N/A GO:0004930 ... P0ABE7
    P28335
    39137033
    918568 8zmg:A (3.4) BS01 A1L11 N/A GO:0004930 ... P0ABE7
    P28223
    39137033
    918569 8zmg:B (3.4) BS01 A1L11 N/A GO:0004930 ... P0ABE7
    P28223
    39137033
    918570 8zmo:A (1.45) BS01 peptide N/A N/A N/A N/A
    918571 8zmo:A (1.45) BS02 peptide N/A N/A N/A N/A
    918572 8zmo:C (1.45) BS01 peptide N/A N/A N/A N/A
    918573 8zmo:E (1.45) BS01 peptide N/A N/A N/A N/A
    918574 8zmq:A (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918575 8zmq:B (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918576 8zmq:C (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918577 8zmq:D (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918578 8zmq:E (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918579 8zmq:F (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918580 8zmq:G (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918581 8zmq:H (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918582 8zmq:I (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918583 8zmq:J (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918584 8zmq:K (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918585 8zmq:L (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918586 8zmq:M (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918587 8zmq:N (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918588 8zmq:O (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918589 8zmq:P (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918590 8zmq:Q (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918591 8zmq:R (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918592 8zmq:S (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918593 8zmq:T (2.2) BS01 A1L12 N/A N/A O60885 39602227
    918594 8zmr:A (3.5) BS01 A1LWL N/A GO:0005277 ... P0AEX9
    Q16572
    38862671
    918595 8zmt:C (2.52) BS01 A1D6P N/A N/A P00163 39601138
    918596 8zmt:C (2.52) BS02 HEM N/A N/A P00163 39601138
    918597 8zmt:C (2.52) BS03 HEM N/A N/A P00163 39601138
    918598 8zmt:D (2.52) BS01 HEM N/A N/A P07143 39601138
    918599 8zmt:E (2.52) BS01 FES N/A N/A P08067 39601138
    918600 8zmt:N (2.52) BS01 A1D6P N/A N/A P00163 39601138

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).