SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    919201 8xsx:LT (2.4) BS02 rna N/A GO:0001650 ... P46778 38942792
    919202 8xsx:LU (2.4) BS01 rna N/A GO:0002181 ... P35268 38942792
    919203 8xsx:LV (2.4) BS01 rna N/A GO:0000122 ... P62829 38942792
    919204 8xsx:LW (2.4) BS01 rna N/A GO:0002181 ... P83731 38942792
    919205 8xsx:LW (2.4) BS02 rna N/A GO:0002181 ... P83731 38942792
    919206 8xsx:LX (2.4) BS01 rna N/A GO:0002181 ... P62750 38942792
    919207 8xsx:LX (2.4) BS02 rna N/A GO:0002181 ... P62750 38942792
    919208 8xsx:LY (2.4) BS01 rna N/A GO:0002181 ... P61254 38942792
    919209 8xsx:LY (2.4) BS02 rna N/A GO:0002181 ... P61254 38942792
    919210 8xsx:LZ (2.4) BS01 rna N/A GO:0002181 ... P61353 38942792
    919211 8xsx:La (2.4) BS01 rna N/A GO:0002181 ... P46776 38942792
    919212 8xsx:Lb (2.4) BS01 rna N/A GO:0002181 ... P47914 38942792
    919213 8xsx:Lc (2.4) BS01 rna N/A GO:0002181 ... P62888 38942792
    919214 8xsx:Lc (2.4) BS02 rna N/A GO:0002181 ... P62888 38942792
    919215 8xsx:Ld (2.4) BS01 rna N/A GO:0002181 ... P62899 38942792
    919216 8xsx:Le (2.4) BS01 rna N/A GO:0002181 ... P62910 38942792
    919217 8xsx:Le (2.4) BS02 MG N/A GO:0002181 ... P62910 38942792
    919218 8xsx:Lf (2.4) BS01 rna N/A GO:0002181 ... P18077 38942792
    919219 8xsx:Lg (2.4) BS01 rna N/A GO:0002181 ... P49207 38942792
    919220 8xsx:Lg (2.4) BS02 MG N/A GO:0002181 ... P49207 38942792
    919221 8xsx:Lg (2.4) BS03 ZN N/A GO:0002181 ... P49207 38942792
    919222 8xsx:Lh (2.4) BS01 rna N/A GO:0000463 ... P42766 38942792
    919223 8xsx:Lh (2.4) BS02 rna N/A GO:0000463 ... P42766 38942792
    919224 8xsx:Li (2.4) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    919225 8xsx:Lj (2.4) BS01 rna N/A GO:0000448 ... P61927 38942792
    919226 8xsx:Lj (2.4) BS02 rna N/A GO:0000448 ... P61927 38942792
    919227 8xsx:Lj (2.4) BS03 ZN N/A GO:0000448 ... P61927 38942792
    919228 8xsx:Lk (2.4) BS01 rna N/A GO:0002181 ... P63173 38942792
    919229 8xsx:Ll (2.4) BS01 rna N/A GO:0002181 ... P62891 38942792
    919230 8xsx:Ll (2.4) BS02 rna N/A GO:0002181 ... P62891 38942792
    919231 8xsx:Lm (2.4) BS01 rna N/A GO:0002181 ... P62987 38942792
    919232 8xsx:Lm (2.4) BS02 ZN N/A GO:0002181 ... P62987 38942792
    919233 8xsx:Lo (2.4) BS01 rna N/A GO:0002181 ... P83881 38942792
    919234 8xsx:Lo (2.4) BS02 rna N/A GO:0002181 ... P83881 38942792
    919235 8xsx:Lo (2.4) BS03 ZN N/A GO:0002181 ... P83881 38942792
    919236 8xsx:Lp (2.4) BS01 rna N/A GO:0002181 ... P61513 38942792
    919237 8xsx:Lp (2.4) BS02 ZN N/A GO:0002181 ... P61513 38942792
    919238 8xsx:Lr (2.4) BS01 rna N/A GO:0002181 ... P46779 38942792
    919239 8xsx:Ls (2.4) BS01 rna N/A GO:0002181 ... P05388 38942792
    919240 8xsx:Lz (2.4) BS01 rna N/A GO:0002181 ... P62906 38942792
    919241 8xsx:SA (2.4) BS01 rna N/A GO:0000028 ... P08865 38942792
    919242 8xsx:SB (2.4) BS01 rna N/A GO:0002181 ... P61247 38942792
    919243 8xsx:SC (2.4) BS01 rna N/A GO:0002181 ... P15880 38942792
    919244 8xsx:SD (2.4) BS01 rna N/A GO:0001228 ... P23396 38942792
    919245 8xsx:SE (2.4) BS01 rna N/A GO:0002181 ... P62701 38942792
    919246 8xsx:SF (2.4) BS01 rna N/A GO:0002181 ... P46782 38942792
    919247 8xsx:SG (2.4) BS01 rna N/A GO:0002181 ... P62753 38942792
    919248 8xsx:SH (2.4) BS01 rna N/A GO:0002181 ... P62081 38942792
    919249 8xsx:SI (2.4) BS01 rna N/A GO:0002181 ... P62241 38942792
    919250 8xsx:SI (2.4) BS02 rna N/A GO:0002181 ... P62241 38942792
    919251 8xsx:SJ (2.4) BS01 rna N/A GO:0002181 ... P46781 38942792
    919252 8xsx:SK (2.4) BS01 rna N/A GO:0002181 ... P46783 38942792
    919253 8xsx:SL (2.4) BS01 rna N/A GO:0002181 ... P62280 38942792
    919254 8xsx:SM (2.4) BS01 rna N/A GO:0002181 ... P25398 38942792
    919255 8xsx:SN (2.4) BS01 rna N/A GO:0000462 ... P62277 38942792
    919256 8xsx:SN (2.4) BS02 rna N/A GO:0000462 ... P62277 38942792
    919257 8xsx:SO (2.4) BS01 rna N/A GO:0000028 ... P62263 38942792
    919258 8xsx:SP (2.4) BS01 rna N/A GO:0000056 ... P62841 38942792
    919259 8xsx:SQ (2.4) BS01 rna N/A GO:0000462 ... P62249 38942792
    919260 8xsx:SR (2.4) BS01 rna N/A GO:0002181 ... P08708 38942792
    919261 8xsx:SS (2.4) BS01 rna N/A GO:0002181 ... P62269 38942792
    919262 8xsx:ST (2.4) BS01 rna N/A GO:0000028 ... P39019 38942792
    919263 8xsx:SU (2.4) BS01 rna N/A GO:0002181 ... P60866 38942792
    919264 8xsx:SW (2.4) BS01 rna N/A GO:0002181 ... P62244 38942792
    919265 8xsx:SX (2.4) BS01 rna N/A GO:0002181 ... P62266 38942792
    919266 8xsx:SY (2.4) BS01 rna N/A GO:0002181 ... P62847 38942792
    919267 8xsx:SZ (2.4) BS01 rna N/A GO:0002181 ... P62851 38942792
    919268 8xsx:Sa (2.4) BS01 rna N/A GO:0002181 ... P62854 38942792
    919269 8xsx:Sa (2.4) BS02 ZN N/A GO:0002181 ... P62854 38942792
    919270 8xsx:Sb (2.4) BS01 rna N/A GO:0002181 ... P42677 38942792
    919271 8xsx:Sc (2.4) BS01 rna N/A GO:0000028 ... P62857 38942792
    919272 8xsx:Sd (2.4) BS01 rna N/A GO:0002181 ... P62273 38942792
    919273 8xsx:Se (2.4) BS01 rna N/A GO:0003735 ... P62861 38942792
    919274 8xsx:Sf (2.4) BS01 rna N/A GO:0002181 ... P62979 38942792
    919275 8xsx:Sg (2.4) BS01 rna N/A GO:0001891 ... P63244 38942792
    919276 8xsy:CA (3.0) BS01 rna N/A GO:0003676 ... Q9UQ80 38942792
    919277 8xsy:CE (3.0) BS01 rna N/A GO:0003713 ... Q96CT7 38942792
    919278 8xsy:LA (3.0) BS01 rna N/A GO:0002181 ... P62917 38942792
    919279 8xsy:LA (3.0) BS02 rna N/A GO:0002181 ... P62917 38942792
    919280 8xsy:LA (3.0) BS03 MG N/A GO:0002181 ... P62917 38942792
    919281 8xsy:LB (3.0) BS01 rna N/A GO:0002181 ... P39023 38942792
    919282 8xsy:LC (3.0) BS01 rna N/A GO:0002181 ... P36578 38942792
    919283 8xsy:LC (3.0) BS02 rna N/A GO:0002181 ... P36578 38942792
    919284 8xsy:LD (3.0) BS01 rna N/A GO:0000027 ... P46777 38942792
    919285 8xsy:LD (3.0) BS02 rna N/A GO:0000027 ... P46777 38942792
    919286 8xsy:LE (3.0) BS01 rna N/A GO:0002181 ... Q02878 38942792
    919287 8xsy:LF (3.0) BS01 rna N/A GO:0000463 ... P18124 38942792
    919288 8xsy:LF (3.0) BS02 rna N/A GO:0000463 ... P18124 38942792
    919289 8xsy:LG (3.0) BS01 rna N/A GO:0000470 ... P62424 38942792
    919290 8xsy:LG (3.0) BS02 rna N/A GO:0000470 ... P62424 38942792
    919291 8xsy:LH (3.0) BS01 rna N/A GO:0002181 ... P32969 38942792
    919292 8xsy:LI (3.0) BS01 rna N/A GO:0000122 ... P27635 38942792
    919293 8xsy:LI (3.0) BS02 rna N/A GO:0000122 ... P27635 38942792
    919294 8xsy:LJ (3.0) BS01 rna N/A GO:0000027 ... P62913 38942792
    919295 8xsy:LJ (3.0) BS02 rna N/A GO:0000027 ... P62913 38942792
    919296 8xsy:LL (3.0) BS01 rna N/A GO:0002181 ... P26373 38942792
    919297 8xsy:LL (3.0) BS02 rna N/A GO:0002181 ... P26373 38942792
    919298 8xsy:LM (3.0) BS01 rna N/A GO:0002181 ... P50914 38942792
    919299 8xsy:LN (3.0) BS01 rna N/A GO:0002181 ... P61313 38942792
    919300 8xsy:LN (3.0) BS02 rna N/A GO:0002181 ... P61313 38942792
    919301 8xsy:LO (3.0) BS01 rna N/A GO:0002181 ... P40429 38942792
    919302 8xsy:LP (3.0) BS01 rna N/A GO:0002181 ... P18621 38942792
    919303 8xsy:LP (3.0) BS02 rna N/A GO:0002181 ... P18621 38942792
    919304 8xsy:LQ (3.0) BS01 rna N/A GO:0002181 ... Q07020 38942792
    919305 8xsy:LR (3.0) BS01 rna N/A GO:0002181 ... P84098 38942792
    919306 8xsy:LR (3.0) BS02 rna N/A GO:0002181 ... P84098 38942792
    919307 8xsy:LS (3.0) BS01 rna N/A GO:0002181 ... Q02543 38942792
    919308 8xsy:LS (3.0) BS02 rna N/A GO:0002181 ... Q02543 38942792
    919309 8xsy:LT (3.0) BS01 rna N/A GO:0001650 ... P46778 38942792
    919310 8xsy:LT (3.0) BS02 rna N/A GO:0001650 ... P46778 38942792
    919311 8xsy:LU (3.0) BS01 rna N/A GO:0002181 ... P35268 38942792
    919312 8xsy:LV (3.0) BS01 rna N/A GO:0000122 ... P62829 38942792
    919313 8xsy:LW (3.0) BS01 rna N/A GO:0002181 ... P83731 38942792
    919314 8xsy:LW (3.0) BS02 rna N/A GO:0002181 ... P83731 38942792
    919315 8xsy:LX (3.0) BS01 rna N/A GO:0002181 ... P62750 38942792
    919316 8xsy:LX (3.0) BS02 rna N/A GO:0002181 ... P62750 38942792
    919317 8xsy:LY (3.0) BS01 rna N/A GO:0002181 ... P61254 38942792
    919318 8xsy:LY (3.0) BS02 rna N/A GO:0002181 ... P61254 38942792
    919319 8xsy:LZ (3.0) BS01 rna N/A GO:0002181 ... P61353 38942792
    919320 8xsy:La (3.0) BS01 rna N/A GO:0002181 ... P46776 38942792
    919321 8xsy:Lb (3.0) BS01 rna N/A GO:0002181 ... P47914 38942792
    919322 8xsy:Lc (3.0) BS01 rna N/A GO:0002181 ... P62888 38942792
    919323 8xsy:Lc (3.0) BS02 peptide N/A GO:0002181 ... P62888 38942792
    919324 8xsy:Ld (3.0) BS01 rna N/A GO:0002181 ... P62899 38942792
    919325 8xsy:Le (3.0) BS01 rna N/A GO:0002181 ... P62910 38942792
    919326 8xsy:Le (3.0) BS02 MG N/A GO:0002181 ... P62910 38942792
    919327 8xsy:Lf (3.0) BS01 rna N/A GO:0002181 ... P18077 38942792
    919328 8xsy:Lg (3.0) BS01 rna N/A GO:0002181 ... P49207 38942792
    919329 8xsy:Lg (3.0) BS02 peptide N/A GO:0002181 ... P49207 38942792
    919330 8xsy:Lg (3.0) BS03 MG N/A GO:0002181 ... P49207 38942792
    919331 8xsy:Lg (3.0) BS04 ZN N/A GO:0002181 ... P49207 38942792
    919332 8xsy:Lh (3.0) BS01 rna N/A GO:0000463 ... P42766 38942792
    919333 8xsy:Lh (3.0) BS02 rna N/A GO:0000463 ... P42766 38942792
    919334 8xsy:Li (3.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    919335 8xsy:Lj (3.0) BS01 rna N/A GO:0000448 ... P61927 38942792
    919336 8xsy:Lj (3.0) BS02 rna N/A GO:0000448 ... P61927 38942792
    919337 8xsy:Lj (3.0) BS03 ZN N/A GO:0000448 ... P61927 38942792
    919338 8xsy:Lk (3.0) BS01 rna N/A GO:0002181 ... P63173 38942792
    919339 8xsy:Ll (3.0) BS01 rna N/A GO:0002181 ... P62891 38942792
    919340 8xsy:Ll (3.0) BS02 rna N/A GO:0002181 ... P62891 38942792
    919341 8xsy:Lm (3.0) BS01 rna N/A GO:0002181 ... P62987 38942792
    919342 8xsy:Lm (3.0) BS02 ZN N/A GO:0002181 ... P62987 38942792
    919343 8xsy:Lo (3.0) BS01 rna N/A GO:0002181 ... P83881 38942792
    919344 8xsy:Lo (3.0) BS02 rna N/A GO:0002181 ... P83881 38942792
    919345 8xsy:Lo (3.0) BS03 ZN N/A GO:0002181 ... P83881 38942792
    919346 8xsy:Lp (3.0) BS01 rna N/A GO:0002181 ... P61513 38942792
    919347 8xsy:Lp (3.0) BS02 ZN N/A GO:0002181 ... P61513 38942792
    919348 8xsy:Lr (3.0) BS01 rna N/A GO:0002181 ... P46779 38942792
    919349 8xsy:Ls (3.0) BS01 rna N/A GO:0002181 ... P05388 38942792
    919350 8xsy:Lt (3.0) BS01 rna N/A GO:0002181 ... P30050 38942792
    919351 8xsy:SA (3.0) BS01 rna N/A GO:0000028 ... P08865 38942792
    919352 8xsy:SB (3.0) BS01 rna N/A GO:0002181 ... P61247 38942792
    919353 8xsy:SB (3.0) BS02 rna N/A GO:0002181 ... P61247 38942792
    919354 8xsy:SC (3.0) BS01 rna N/A GO:0002181 ... P15880 38942792
    919355 8xsy:SD (3.0) BS01 rna N/A GO:0001228 ... P23396 38942792
    919356 8xsy:SE (3.0) BS01 rna N/A GO:0002181 ... P62701 38942792
    919357 8xsy:SF (3.0) BS01 rna N/A GO:0002181 ... P46782 38942792
    919358 8xsy:SG (3.0) BS01 rna N/A GO:0002181 ... P62753 38942792
    919359 8xsy:SH (3.0) BS01 rna N/A GO:0002181 ... P62081 38942792
    919360 8xsy:SI (3.0) BS01 rna N/A GO:0002181 ... P62241 38942792
    919361 8xsy:SI (3.0) BS02 rna N/A GO:0002181 ... P62241 38942792
    919362 8xsy:SJ (3.0) BS01 rna N/A GO:0002181 ... P46781 38942792
    919363 8xsy:SK (3.0) BS01 rna N/A GO:0002181 ... P46783 38942792
    919364 8xsy:SL (3.0) BS01 rna N/A GO:0002181 ... P62280 38942792
    919365 8xsy:SM (3.0) BS01 rna N/A GO:0002181 ... P25398 38942792
    919366 8xsy:SM (3.0) BS02 ZN N/A GO:0002181 ... P25398 38942792
    919367 8xsy:SN (3.0) BS01 rna N/A GO:0000462 ... P62277 38942792
    919368 8xsy:SO (3.0) BS01 rna N/A GO:0000028 ... P62263 38942792
    919369 8xsy:SP (3.0) BS01 rna N/A GO:0000056 ... P62841 38942792
    919370 8xsy:SQ (3.0) BS01 rna N/A GO:0000462 ... P62249 38942792
    919371 8xsy:SR (3.0) BS01 rna N/A GO:0002181 ... P08708 38942792
    919372 8xsy:SS (3.0) BS01 rna N/A GO:0002181 ... P62269 38942792
    919373 8xsy:ST (3.0) BS01 rna N/A GO:0000028 ... P39019 38942792
    919374 8xsy:SU (3.0) BS01 rna N/A GO:0002181 ... P60866 38942792
    919375 8xsy:SW (3.0) BS01 rna N/A GO:0002181 ... P62244 38942792
    919376 8xsy:SX (3.0) BS01 rna N/A GO:0002181 ... P62266 38942792
    919377 8xsy:SY (3.0) BS01 rna N/A GO:0002181 ... P62847 38942792
    919378 8xsy:SZ (3.0) BS01 rna N/A GO:0002181 ... P62851 38942792
    919379 8xsy:Sa (3.0) BS01 rna N/A GO:0002181 ... P62854 38942792
    919380 8xsy:Sa (3.0) BS02 ZN N/A GO:0002181 ... P62854 38942792
    919381 8xsy:Sb (3.0) BS01 rna N/A GO:0002181 ... P42677 38942792
    919382 8xsy:Sc (3.0) BS01 rna N/A GO:0000028 ... P62857 38942792
    919383 8xsy:Sd (3.0) BS01 rna N/A GO:0002181 ... P62273 38942792
    919384 8xsy:Se (3.0) BS01 rna N/A GO:0003735 ... P62861 38942792
    919385 8xsy:Sf (3.0) BS01 rna N/A GO:0002181 ... P62979 38942792
    919386 8xsy:Sg (3.0) BS01 rna N/A GO:0001891 ... P63244 38942792
    919387 8xsz:CA (3.2) BS01 rna N/A GO:0003676 ... Q9UQ80 38942792
    919388 8xsz:LA (3.2) BS01 rna N/A GO:0002181 ... P62917 38942792
    919389 8xsz:LA (3.2) BS02 rna N/A GO:0002181 ... P62917 38942792
    919390 8xsz:LA (3.2) BS03 MG N/A GO:0002181 ... P62917 38942792
    919391 8xsz:LB (3.2) BS01 rna N/A GO:0002181 ... P39023 38942792
    919392 8xsz:LC (3.2) BS01 rna N/A GO:0002181 ... P36578 38942792
    919393 8xsz:LC (3.2) BS02 rna N/A GO:0002181 ... P36578 38942792
    919394 8xsz:LD (3.2) BS01 rna N/A GO:0000027 ... P46777 38942792
    919395 8xsz:LD (3.2) BS02 rna N/A GO:0000027 ... P46777 38942792
    919396 8xsz:LE (3.2) BS01 rna N/A GO:0002181 ... Q02878 38942792
    919397 8xsz:LF (3.2) BS01 rna N/A GO:0000463 ... P18124 38942792
    919398 8xsz:LF (3.2) BS02 rna N/A GO:0000463 ... P18124 38942792
    919399 8xsz:LG (3.2) BS01 rna N/A GO:0000470 ... P62424 38942792
    919400 8xsz:LG (3.2) BS02 rna N/A GO:0000470 ... P62424 38942792

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).