SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    919401 8xsz:LH (3.2) BS01 rna N/A GO:0002181 ... P32969 38942792
    919402 8xsz:LI (3.2) BS01 rna N/A GO:0000122 ... P27635 38942792
    919403 8xsz:LI (3.2) BS02 rna N/A GO:0000122 ... P27635 38942792
    919404 8xsz:LI (3.2) BS03 rna N/A GO:0000122 ... P27635 38942792
    919405 8xsz:LJ (3.2) BS01 rna N/A GO:0000027 ... P62913 38942792
    919406 8xsz:LJ (3.2) BS02 rna N/A GO:0000027 ... P62913 38942792
    919407 8xsz:LL (3.2) BS01 rna N/A GO:0002181 ... P26373 38942792
    919408 8xsz:LL (3.2) BS02 rna N/A GO:0002181 ... P26373 38942792
    919409 8xsz:LM (3.2) BS01 rna N/A GO:0002181 ... P50914 38942792
    919410 8xsz:LN (3.2) BS01 rna N/A GO:0002181 ... P61313 38942792
    919411 8xsz:LN (3.2) BS02 rna N/A GO:0002181 ... P61313 38942792
    919412 8xsz:LO (3.2) BS01 rna N/A GO:0002181 ... P40429 38942792
    919413 8xsz:LP (3.2) BS01 rna N/A GO:0002181 ... P18621 38942792
    919414 8xsz:LP (3.2) BS02 rna N/A GO:0002181 ... P18621 38942792
    919415 8xsz:LQ (3.2) BS01 rna N/A GO:0002181 ... Q07020 38942792
    919416 8xsz:LR (3.2) BS01 rna N/A GO:0002181 ... P84098 38942792
    919417 8xsz:LS (3.2) BS01 rna N/A GO:0002181 ... Q02543 38942792
    919418 8xsz:LS (3.2) BS02 rna N/A GO:0002181 ... Q02543 38942792
    919419 8xsz:LT (3.2) BS01 rna N/A GO:0001650 ... P46778 38942792
    919420 8xsz:LT (3.2) BS02 rna N/A GO:0001650 ... P46778 38942792
    919421 8xsz:LU (3.2) BS01 rna N/A GO:0002181 ... P35268 38942792
    919422 8xsz:LV (3.2) BS01 rna N/A GO:0000122 ... P62829 38942792
    919423 8xsz:LV (3.2) BS02 rna N/A GO:0000122 ... P62829 38942792
    919424 8xsz:LW (3.2) BS01 rna N/A GO:0002181 ... P83731 38942792
    919425 8xsz:LW (3.2) BS02 rna N/A GO:0002181 ... P83731 38942792
    919426 8xsz:LX (3.2) BS01 rna N/A GO:0002181 ... P62750 38942792
    919427 8xsz:LX (3.2) BS02 rna N/A GO:0002181 ... P62750 38942792
    919428 8xsz:LY (3.2) BS01 rna N/A GO:0002181 ... P61254 38942792
    919429 8xsz:LY (3.2) BS02 rna N/A GO:0002181 ... P61254 38942792
    919430 8xsz:LZ (3.2) BS01 rna N/A GO:0002181 ... P61353 38942792
    919431 8xsz:La (3.2) BS01 rna N/A GO:0002181 ... P46776 38942792
    919432 8xsz:Lb (3.2) BS01 rna N/A GO:0002181 ... P47914 38942792
    919433 8xsz:Lc (3.2) BS01 rna N/A GO:0002181 ... P62888 38942792
    919434 8xsz:Lc (3.2) BS02 rna N/A GO:0002181 ... P62888 38942792
    919435 8xsz:Lc (3.2) BS03 peptide N/A GO:0002181 ... P62888 38942792
    919436 8xsz:Ld (3.2) BS01 rna N/A GO:0002181 ... P62899 38942792
    919437 8xsz:Le (3.2) BS01 rna N/A GO:0002181 ... P62910 38942792
    919438 8xsz:Le (3.2) BS02 MG N/A GO:0002181 ... P62910 38942792
    919439 8xsz:Lf (3.2) BS01 rna N/A GO:0002181 ... P18077 38942792
    919440 8xsz:Lg (3.2) BS01 rna N/A GO:0002181 ... P49207 38942792
    919441 8xsz:Lg (3.2) BS02 MG N/A GO:0002181 ... P49207 38942792
    919442 8xsz:Lg (3.2) BS03 ZN N/A GO:0002181 ... P49207 38942792
    919443 8xsz:Lh (3.2) BS01 rna N/A GO:0000463 ... P42766 38942792
    919444 8xsz:Lh (3.2) BS02 rna N/A GO:0000463 ... P42766 38942792
    919445 8xsz:Li (3.2) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    919446 8xsz:Lj (3.2) BS01 rna N/A GO:0000448 ... P61927 38942792
    919447 8xsz:Lj (3.2) BS02 rna N/A GO:0000448 ... P61927 38942792
    919448 8xsz:Lj (3.2) BS03 ZN N/A GO:0000448 ... P61927 38942792
    919449 8xsz:Lk (3.2) BS01 rna N/A GO:0002181 ... P63173 38942792
    919450 8xsz:Ll (3.2) BS01 rna N/A GO:0002181 ... P62891 38942792
    919451 8xsz:Ll (3.2) BS02 rna N/A GO:0002181 ... P62891 38942792
    919452 8xsz:Lm (3.2) BS01 rna N/A GO:0002181 ... P62987 38942792
    919453 8xsz:Lm (3.2) BS02 ZN N/A GO:0002181 ... P62987 38942792
    919454 8xsz:Lo (3.2) BS01 rna N/A GO:0002181 ... P83881 38942792
    919455 8xsz:Lo (3.2) BS02 rna N/A GO:0002181 ... P83881 38942792
    919456 8xsz:Lo (3.2) BS03 ZN N/A GO:0002181 ... P83881 38942792
    919457 8xsz:Lp (3.2) BS01 rna N/A GO:0002181 ... P61513 38942792
    919458 8xsz:Lp (3.2) BS02 rna N/A GO:0002181 ... P61513 38942792
    919459 8xsz:Lp (3.2) BS03 ZN N/A GO:0002181 ... P61513 38942792
    919460 8xsz:Lr (3.2) BS01 rna N/A GO:0002181 ... P46779 38942792
    919461 8xsz:Ls (3.2) BS01 rna N/A GO:0002181 ... P05388 38942792
    919462 8xsz:Lt (3.2) BS01 rna N/A GO:0002181 ... P30050 38942792
    919463 8xsz:SA (3.2) BS01 rna N/A GO:0000028 ... P08865 38942792
    919464 8xsz:SB (3.2) BS01 rna N/A GO:0002181 ... P61247 38942792
    919465 8xsz:SB (3.2) BS02 rna N/A GO:0002181 ... P61247 38942792
    919466 8xsz:SC (3.2) BS01 rna N/A GO:0002181 ... P15880 38942792
    919467 8xsz:SD (3.2) BS01 rna N/A GO:0001228 ... P23396 38942792
    919468 8xsz:SE (3.2) BS01 rna N/A GO:0002181 ... P62701 38942792
    919469 8xsz:SF (3.2) BS01 rna N/A GO:0002181 ... P46782 38942792
    919470 8xsz:SG (3.2) BS01 rna N/A GO:0002181 ... P62753 38942792
    919471 8xsz:SH (3.2) BS01 rna N/A GO:0002181 ... P62081 38942792
    919472 8xsz:SI (3.2) BS01 rna N/A GO:0002181 ... P62241 38942792
    919473 8xsz:SI (3.2) BS02 MG N/A GO:0002181 ... P62241 38942792
    919474 8xsz:SI (3.2) BS03 MG N/A GO:0002181 ... P62241 38942792
    919475 8xsz:SJ (3.2) BS01 rna N/A GO:0002181 ... P46781 38942792
    919476 8xsz:SK (3.2) BS01 rna N/A GO:0002181 ... P46783 38942792
    919477 8xsz:SL (3.2) BS01 rna N/A GO:0002181 ... P62280 38942792
    919478 8xsz:SM (3.2) BS01 rna N/A GO:0002181 ... P25398 38942792
    919479 8xsz:SM (3.2) BS02 ZN N/A GO:0002181 ... P25398 38942792
    919480 8xsz:SN (3.2) BS01 rna N/A GO:0000462 ... P62277 38942792
    919481 8xsz:SN (3.2) BS02 rna N/A GO:0000462 ... P62277 38942792
    919482 8xsz:SO (3.2) BS01 rna N/A GO:0000028 ... P62263 38942792
    919483 8xsz:SP (3.2) BS01 rna N/A GO:0000056 ... P62841 38942792
    919484 8xsz:SP (3.2) BS02 rna N/A GO:0000056 ... P62841 38942792
    919485 8xsz:SQ (3.2) BS01 rna N/A GO:0000462 ... P62249 38942792
    919486 8xsz:SR (3.2) BS01 rna N/A GO:0002181 ... P08708 38942792
    919487 8xsz:SS (3.2) BS01 rna N/A GO:0002181 ... P62269 38942792
    919488 8xsz:ST (3.2) BS01 rna N/A GO:0000028 ... P39019 38942792
    919489 8xsz:SU (3.2) BS01 rna N/A GO:0002181 ... P60866 38942792
    919490 8xsz:SW (3.2) BS01 rna N/A GO:0002181 ... P62244 38942792
    919491 8xsz:SX (3.2) BS01 rna N/A GO:0002181 ... P62266 38942792
    919492 8xsz:SY (3.2) BS01 rna N/A GO:0002181 ... P62847 38942792
    919493 8xsz:SZ (3.2) BS01 rna N/A GO:0002181 ... P62851 38942792
    919494 8xsz:Sa (3.2) BS01 rna N/A GO:0002181 ... P62854 38942792
    919495 8xsz:Sb (3.2) BS01 rna N/A GO:0002181 ... P42677 38942792
    919496 8xsz:Sc (3.2) BS01 rna N/A GO:0000028 ... P62857 38942792
    919497 8xsz:Sd (3.2) BS01 rna N/A GO:0002181 ... P62273 38942792
    919498 8xsz:Se (3.2) BS01 rna N/A GO:0003735 ... P62861 38942792
    919499 8xsz:Sf (3.2) BS01 rna N/A GO:0002181 ... P62979 38942792
    919500 8xsz:Sg (3.2) BS01 rna N/A GO:0001891 ... P63244 38942792
    919501 8xt0:L3 (3.2) BS01 rna N/A GO:0005515 ... Q96EL3 38942792
    919502 8xt0:L4 (3.2) BS01 rna N/A GO:0003723 ... Q6P161 38942792
    919503 8xt0:L6 (3.2) BS01 rna N/A GO:0003735 ... Q9BQC6 38942792
    919504 8xt0:L8 (3.2) BS01 rna N/A GO:0003735 ... Q8TAE8 38942792
    919505 8xt0:LB (3.2) BS01 rna N/A GO:0003723 ... Q5T653 38942792
    919506 8xt0:LB (3.2) BS02 MG N/A GO:0003723 ... Q5T653 38942792
    919507 8xt0:LC (3.2) BS01 rna N/A GO:0003723 ... P09001 38942792
    919508 8xt0:LD (3.2) BS01 rna N/A GO:0003723 ... Q9BYD3 38942792
    919509 8xt0:LI (3.2) BS01 rna N/A GO:0003723 ... Q9BYD2 38942792
    919510 8xt0:LJ (3.2) BS01 rna N/A GO:0003723 ... Q7Z7H8 38942792
    919511 8xt0:LK (3.2) BS01 rna N/A GO:0003723 ... Q9Y3B7 38942792
    919512 8xt0:LM (3.2) BS01 rna N/A GO:0003723 ... Q9BYD1 38942792
    919513 8xt0:LN (3.2) BS01 rna N/A GO:0003723 ... Q6P1L8 38942792
    919514 8xt0:LO (3.2) BS01 rna N/A GO:0003723 ... Q9P015 38942792
    919515 8xt0:LP (3.2) BS01 rna N/A GO:0003735 ... Q9NX20 38942792
    919516 8xt0:LQ (3.2) BS01 rna N/A GO:0003735 ... Q9NRX2 38942792
    919517 8xt0:LR (3.2) BS01 rna N/A GO:0003735 ... Q9H0U6 38942792
    919518 8xt0:LR (3.2) BS02 rna N/A GO:0003735 ... Q9H0U6 38942792
    919519 8xt0:LS (3.2) BS01 rna N/A GO:0003735 ... P49406 38942792
    919520 8xt0:LT (3.2) BS01 rna N/A GO:0003723 ... Q9BYC9 38942792
    919521 8xt0:LU (3.2) BS01 rna N/A GO:0003723 ... Q7Z2W9 38942792
    919522 8xt0:LV (3.2) BS01 rna N/A GO:0003735 ... Q9NWU5 38942792
    919523 8xt0:LW (3.2) BS01 rna N/A GO:0003723 ... Q16540 38942792
    919524 8xt0:LX (3.2) BS01 rna N/A GO:0003723 ... Q96A35 38942792
    919525 8xt0:La (3.2) BS01 rna N/A GO:0003723 ... Q9P0M9 38942792
    919526 8xt0:Lb (3.2) BS01 rna N/A GO:0003723 ... Q13084 38942792
    919527 8xt0:Ld (3.2) BS01 rna N/A GO:0003735 ... Q8TCC3 38942792
    919528 8xt0:Lf (3.2) BS01 rna N/A GO:0003723 ... Q9BYC8 38942792
    919529 8xt0:Lf (3.2) BS02 ZN N/A GO:0003723 ... Q9BYC8 38942792
    919530 8xt0:Lg (3.2) BS01 rna N/A GO:0003735 ... O75394 38942792
    919531 8xt0:Lh (3.2) BS01 rna N/A GO:0003735 ... Q9BQ48 38942792
    919532 8xt0:Li (3.2) BS01 rna N/A GO:0003735 ... Q9NZE8 38942792
    919533 8xt0:Lj (3.2) BS01 rna N/A GO:0003735 ... Q9P0J6 38942792
    919534 8xt0:Lj (3.2) BS02 ZN N/A GO:0003735 ... Q9P0J6 38942792
    919535 8xt0:Lk (3.2) BS01 rna N/A GO:0003723 ... Q9BZE1 38942792
    919536 8xt0:Ll (3.2) BS01 rna N/A GO:0005515 ... Q96DV4 38942792
    919537 8xt0:Ll (3.2) BS02 rna N/A GO:0005515 ... Q96DV4 38942792
    919538 8xt0:Ln (3.2) BS01 rna N/A GO:0003723 ... Q9NQ50 38942792
    919539 8xt0:Lo (3.2) BS01 rna N/A GO:0003723 ... Q8IXM3 38942792
    919540 8xt0:Lp (3.2) BS01 rna N/A GO:0003723 ... Q9Y6G3 38942792
    919541 8xt0:Lq (3.2) BS01 rna N/A GO:0003723 ... Q8N983 38942792
    919542 8xt0:Lr (3.2) BS01 rna N/A GO:0003723 ... Q9H9J2 38942792
    919543 8xt0:Lu (3.2) BS01 rna N/A GO:0003735 ... Q9HD33 38942792
    919544 8xt0:Lv (3.2) BS01 rna N/A GO:0005515 ... Q96GC5 38942792
    919545 8xt0:Lv (3.2) BS02 rna N/A GO:0005515 ... Q96GC5 38942792
    919546 8xt0:Lw (3.2) BS01 rna N/A GO:0003735 ... Q13405 38942792
    919547 8xt0:Ly (3.2) BS01 rna N/A GO:0003735 ... Q4U2R6 38942792
    919548 8xt0:Lz (3.2) BS01 rna N/A GO:0003735 ... Q86TS9 38942792
    919549 8xt0:SB (3.2) BS01 rna N/A GO:0003735 ... Q9Y399 38942792
    919550 8xt0:SB (3.2) BS02 ZN N/A GO:0003735 ... Q9Y399 38942792
    919551 8xt0:SE (3.2) BS01 rna N/A GO:0003723 ... P82675 38942792
    919552 8xt0:SF (3.2) BS01 rna N/A GO:0003735 ... P82932 38942792
    919553 8xt0:SG (3.2) BS01 rna N/A GO:0003723 ... Q9Y2R9 38942792
    919554 8xt0:SI (3.2) BS01 rna N/A GO:0003723 ... P82933 38942792
    919555 8xt0:SJ (3.2) BS01 rna N/A GO:0005739 ... P82664 38942792
    919556 8xt0:SK (3.2) BS01 rna N/A GO:0003723 ... P82912 38942792
    919557 8xt0:SL (3.2) BS01 rna N/A GO:0003723 ... O15235 38942792
    919558 8xt0:SN (3.2) BS01 rna N/A GO:0003723 ... O60783 38942792
    919559 8xt0:SO (3.2) BS01 rna N/A GO:0003723 ... P82914 38942792
    919560 8xt0:SP (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D3 38942792
    919561 8xt0:SQ (3.2) BS01 rna N/A GO:0003735 ... Q9Y2R5 38942792
    919562 8xt0:SR (3.2) BS01 rna N/A GO:0003735 ... Q9NVS2 38942792
    919563 8xt0:SS (3.2) BS01 rna N/A GO:0003735 ... Q9Y676 38942792
    919564 8xt0:SS (3.2) BS02 ZN N/A GO:0003735 ... Q9Y676 38942792
    919565 8xt0:ST (3.2) BS01 rna N/A GO:0003735 ... Q9Y3D5 38942792
    919566 8xt0:SW (3.2) BS01 rna N/A GO:0003723 ... P82921 38942792
    919567 8xt0:SY (3.2) BS01 rna N/A GO:0003723 ... Q9Y3D9 38942792
    919568 8xt0:SZ (3.2) BS01 rna N/A GO:0003723 ... Q96EL2 38942792
    919569 8xt0:Sa (3.2) BS01 rna N/A GO:0003735 ... P82663 38942792
    919570 8xt0:Sa (3.2) BS02 ZN N/A GO:0003735 ... P82663 38942792
    919571 8xt0:Sb (3.2) BS01 rna N/A GO:0003723 ... Q9BYN8 38942792
    919572 8xt0:Sc (3.2) BS01 rna N/A GO:0000049 ... Q92552 38942792
    919573 8xt0:Se (3.2) BS01 rna N/A GO:0003723 ... P51398 38942792
    919574 8xt0:Se (3.2) BS02 GDP N/A GO:0003723 ... P51398 38942792
    919575 8xt0:Sf (3.2) BS01 rna N/A GO:0003723 ... Q9NP92 38942792
    919576 8xt0:Si (3.2) BS01 rna N/A GO:0003735 ... Q9Y291 38942792
    919577 8xt0:Sj (3.2) BS01 rna N/A GO:0003735 ... P82930 38942792
    919578 8xt0:Sk (3.2) BS01 rna N/A GO:0003723 ... P82673 38942792
    919579 8xt0:Sm (3.2) BS01 rna N/A GO:0001650 ... Q96BP2 38942792
    919580 8xt0:Sn (3.2) BS01 rna N/A GO:0005515 ... Q9NWT8 38942792
    919581 8xt0:Sn (3.2) BS02 rna N/A GO:0005515 ... Q9NWT8 38942792
    919582 8xt1:L3 (3.1) BS01 rna N/A GO:0005515 ... Q96EL3 38942792
    919583 8xt1:L4 (3.1) BS01 rna N/A GO:0003723 ... Q6P161 38942792
    919584 8xt1:L6 (3.1) BS01 rna N/A GO:0003735 ... Q9BQC6 38942792
    919585 8xt1:L8 (3.1) BS01 rna N/A GO:0003735 ... Q8TAE8 38942792
    919586 8xt1:LB (3.1) BS01 rna N/A GO:0003723 ... Q5T653 38942792
    919587 8xt1:LC (3.1) BS01 rna N/A GO:0003723 ... P09001 38942792
    919588 8xt1:LD (3.1) BS01 rna N/A GO:0003723 ... Q9BYD3 38942792
    919589 8xt1:LI (3.1) BS01 rna N/A GO:0003723 ... Q9BYD2 38942792
    919590 8xt1:LJ (3.1) BS01 rna N/A GO:0003723 ... Q7Z7H8 38942792
    919591 8xt1:LK (3.1) BS01 rna N/A GO:0003723 ... Q9Y3B7 38942792
    919592 8xt1:LM (3.1) BS01 rna N/A GO:0003723 ... Q9BYD1 38942792
    919593 8xt1:LN (3.1) BS01 rna N/A GO:0003723 ... Q6P1L8 38942792
    919594 8xt1:LO (3.1) BS01 rna N/A GO:0003723 ... Q9P015 38942792
    919595 8xt1:LP (3.1) BS01 rna N/A GO:0003735 ... Q9NX20 38942792
    919596 8xt1:LQ (3.1) BS01 rna N/A GO:0003735 ... Q9NRX2 38942792
    919597 8xt1:LR (3.1) BS01 rna N/A GO:0003735 ... Q9H0U6 38942792
    919598 8xt1:LR (3.1) BS02 rna N/A GO:0003735 ... Q9H0U6 38942792
    919599 8xt1:LS (3.1) BS01 rna N/A GO:0003735 ... P49406 38942792
    919600 8xt1:LT (3.1) BS01 rna N/A GO:0003723 ... Q9BYC9 38942792

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).