SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    919601 9au4:a (2.03) BS50 CLA N/A N/A P29254 39612342
    919602 9au4:a (2.03) BS51 CLA N/A N/A P29254 39612342
    919603 9au4:a (2.03) BS52 CLA N/A N/A P29254 39612342
    919604 9au4:a (2.03) BS53 CLA N/A N/A P29254 39612342
    919605 9au4:b (2.03) BS01 CLA N/A N/A P29255 39612342
    919606 9au4:b (2.03) BS02 CLA N/A N/A P29255 39612342
    919607 9au4:b (2.03) BS03 CLA N/A N/A P29255 39612342
    919608 9au4:b (2.03) BS04 CLA N/A N/A P29255 39612342
    919609 9au4:b (2.03) BS05 SF4 N/A N/A P29255 39612342
    919610 9au4:b (2.03) BS06 CLA N/A N/A P29255 39612342
    919611 9au4:b (2.03) BS07 CLA N/A N/A P29255 39612342
    919612 9au4:b (2.03) BS08 CLA N/A N/A P29255 39612342
    919613 9au4:b (2.03) BS09 CLA N/A N/A P29255 39612342
    919614 9au4:b (2.03) BS10 CLA N/A N/A P29255 39612342
    919615 9au4:b (2.03) BS11 CLA N/A N/A P29255 39612342
    919616 9au4:b (2.03) BS12 CLA N/A N/A P29255 39612342
    919617 9au4:b (2.03) BS13 CLA N/A N/A P29255 39612342
    919618 9au4:b (2.03) BS14 CLA N/A N/A P29255 39612342
    919619 9au4:b (2.03) BS15 CLA N/A N/A P29255 39612342
    919620 9au4:b (2.03) BS16 CLA N/A N/A P29255 39612342
    919621 9au4:b (2.03) BS17 CLA N/A N/A P29255 39612342
    919622 9au4:b (2.03) BS18 CLA N/A N/A P29255 39612342
    919623 9au4:b (2.03) BS19 CLA N/A N/A P29255 39612342
    919624 9au4:b (2.03) BS20 CLA N/A N/A P29255 39612342
    919625 9au4:b (2.03) BS21 CLA N/A N/A P29255 39612342
    919626 9au4:b (2.03) BS22 CLA N/A N/A P29255 39612342
    919627 9au4:b (2.03) BS23 CLA N/A N/A P29255 39612342
    919628 9au4:b (2.03) BS24 CLA N/A N/A P29255 39612342
    919629 9au4:b (2.03) BS25 CLA N/A N/A P29255 39612342
    919630 9au4:b (2.03) BS26 CLA N/A N/A P29255 39612342
    919631 9au4:b (2.03) BS27 CLA N/A N/A P29255 39612342
    919632 9au4:b (2.03) BS28 CLA N/A N/A P29255 39612342
    919633 9au4:b (2.03) BS29 CLA N/A N/A P29255 39612342
    919634 9au4:b (2.03) BS30 CLA N/A N/A P29255 39612342
    919635 9au4:b (2.03) BS31 CLA N/A N/A P29255 39612342
    919636 9au4:b (2.03) BS32 CLA N/A N/A P29255 39612342
    919637 9au4:b (2.03) BS33 CLA N/A N/A P29255 39612342
    919638 9au4:b (2.03) BS34 CLA N/A N/A P29255 39612342
    919639 9au4:b (2.03) BS35 CLA N/A N/A P29255 39612342
    919640 9au4:b (2.03) BS36 CLA N/A N/A P29255 39612342
    919641 9au4:b (2.03) BS37 CLA N/A N/A P29255 39612342
    919642 9au4:b (2.03) BS38 CLA N/A N/A P29255 39612342
    919643 9au4:b (2.03) BS39 CLA N/A N/A P29255 39612342
    919644 9au4:b (2.03) BS40 CLA N/A N/A P29255 39612342
    919645 9au4:b (2.03) BS41 CLA N/A N/A P29255 39612342
    919646 9au4:b (2.03) BS42 CLA N/A N/A P29255 39612342
    919647 9au4:b (2.03) BS43 CLA N/A N/A P29255 39612342
    919648 9au4:b (2.03) BS44 CLA N/A N/A P29255 39612342
    919649 9au4:b (2.03) BS45 CLA N/A N/A P29255 39612342
    919650 9au4:b (2.03) BS46 CLA N/A N/A P29255 39612342
    919651 9au4:b (2.03) BS47 CLA N/A N/A P29255 39612342
    919652 9au4:b (2.03) BS48 ECH N/A N/A P29255 39612342
    919653 9au4:b (2.03) BS49 ZEX N/A N/A P29255 39612342
    919654 9au4:b (2.03) BS50 CLA N/A N/A P29255 39612342
    919655 9au4:b (2.03) BS51 A1AGD N/A N/A P29255 39612342
    919656 9au4:b (2.03) BS52 CLA N/A N/A P29255 39612342
    919657 9au4:b (2.03) BS53 ECH N/A N/A P29255 39612342
    919658 9au4:c (2.03) BS01 SF4 N/A N/A P32422 39612342
    919659 9au4:c (2.03) BS02 SF4 N/A N/A P32422 39612342
    919660 9au4:f (2.03) BS01 CLA N/A N/A P29256 39612342
    919661 9au4:f (2.03) BS02 CLA N/A N/A P29256 39612342
    919662 9au4:f (2.03) BS03 CLA N/A N/A P29256 39612342
    919663 9au4:f (2.03) BS04 CLA N/A N/A P29256 39612342
    919664 9au4:f (2.03) BS05 CLA N/A N/A P29256 39612342
    919665 9au4:f (2.03) BS06 CLA N/A N/A P29256 39612342
    919666 9au4:f (2.03) BS07 ZEX N/A N/A P29256 39612342
    919667 9au4:i (2.03) BS01 CLA N/A N/A Q55330 39612342
    919668 9au4:i (2.03) BS02 ECH N/A N/A Q55330 39612342
    919669 9au4:i (2.03) BS03 CLA N/A N/A Q55330 39612342
    919670 9au4:j (2.03) BS01 CLA N/A N/A Q55329 39612342
    919671 9au4:j (2.03) BS02 CLA N/A N/A Q55329 39612342
    919672 9au4:j (2.03) BS03 ZEX N/A N/A Q55329 39612342
    919673 9au4:j (2.03) BS04 CLA N/A N/A Q55329 39612342
    919674 9au4:j (2.03) BS05 CLA N/A N/A Q55329 39612342
    919675 9au4:j (2.03) BS06 CLA N/A N/A Q55329 39612342
    919676 9au4:k (2.03) BS01 CLA N/A N/A P74564 39612342
    919677 9au4:k (2.03) BS02 CLA N/A N/A P74564 39612342
    919678 9au4:k (2.03) BS03 CLA N/A N/A P74564 39612342
    919679 9au4:k (2.03) BS04 CLA N/A N/A P74564 39612342
    919680 9au4:l (2.03) BS01 CLA N/A N/A P37277 39612342
    919681 9au4:l (2.03) BS02 CLA N/A N/A P37277 39612342
    919682 9au4:l (2.03) BS03 CLA N/A N/A P37277 39612342
    919683 9au4:l (2.03) BS04 CLA N/A N/A P37277 39612342
    919684 9au4:l (2.03) BS05 CLA N/A N/A P37277 39612342
    919685 9au4:l (2.03) BS06 CLA N/A N/A P37277 39612342
    919686 9au4:l (2.03) BS07 EQ3 N/A N/A P37277 39612342
    919687 9au4:l (2.03) BS08 CLA N/A N/A P37277 39612342
    919688 9au4:l (2.03) BS09 CA N/A N/A P37277 39612342
    919689 9au4:l (2.03) BS10 CLA N/A N/A P37277 39612342
    919690 9au4:l (2.03) BS11 CLA N/A N/A P37277 39612342
    919691 9au4:l (2.03) BS12 CLA N/A N/A P37277 39612342
    919692 9au4:l (2.03) BS13 CLA N/A N/A P37277 39612342
    919693 9au4:m (2.03) BS01 CLA N/A N/A P72986 39612342
    919694 9au4:m (2.03) BS02 ECH N/A N/A P72986 39612342
    919695 9au7:A (3.4) BS01 peptide N/A GO:0005515 ... Q7Z3J2 39587083
    919696 9auc:R (2.4) BS01 Y01 ? GO:0001503 ... P30988 38603770
    919697 9auc:R (2.4) BS02 Y01 ? GO:0001503 ... P30988 38603770
    919698 9aue:A (1.46) BS01 PMP N/A GO:0008483 ... Q70KE6 39207862
    919699 9auf:A (2.73) BS01 rna N/A N/A A0A1F8ZSN4 39774105
    919700 9auf:A (2.73) BS02 dna N/A N/A A0A1F8ZSN4 39774105
    919701 9auf:A (2.73) BS03 dna N/A N/A A0A1F8ZSN4 39774105
    919702 9auf:A (2.73) BS04 dna N/A N/A A0A1F8ZSN4 39774105
    919703 9aug:G (3.8) BS01 MAN N/A N/A N/A 39772772
    919704 9aug:H (3.8) BS01 MAN N/A N/A N/A 39772772
    919705 9aug:I (3.8) BS01 MAN N/A N/A N/A 39772772
    919706 9aug:L (3.8) BS01 MAN N/A N/A N/A 39772772
    919707 9auh:G (3.6) BS01 MAN N/A N/A N/A 39772772
    919708 9auh:J (3.6) BS01 MAN N/A N/A N/A 39772772
    919709 9aui:I (3.8) BS01 MAN N/A N/A N/A 39772772
    919710 9aui:L (3.8) BS01 MAN N/A N/A N/A 39772772
    919711 9auj:A (1.486) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    919712 9auk:A (1.88) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    919713 9auk:B (1.88) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    919714 9aul:A (2.421) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    919715 9aum:A (1.539) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    919716 9aur:H (1.57) BS01 rna N/A N/A N/A 39178230
    919717 9aur:L (1.57) BS01 rna N/A N/A N/A 39178230
    919718 9aus:A (2.07) BS01 rna N/A N/A N/A 39178230
    919719 9aus:B (2.07) BS01 rna N/A N/A N/A 39178230
    919720 9aus:H (2.07) BS01 rna N/A N/A N/A 39178230
    919721 9aus:L (2.07) BS01 rna N/A N/A N/A 39178230
    919722 9auu:A (2.0) BS01 A1AG2 N/A N/A P07900 39177126
    919723 9auu:A (2.0) BS02 MG N/A N/A P07900 39177126
    919724 9auv:A (1.83) BS01 IMP N/A N/A D0CF46 39207111
    919725 9auv:A (1.83) BS02 VOA N/A N/A D0CF46 39207111
    919726 9auv:A (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919727 9auv:B (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919728 9auv:B (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919729 9auv:B (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919730 9auv:C (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919731 9auv:C (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919732 9auv:C (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919733 9auv:D (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919734 9auv:D (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919735 9auv:D (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919736 9auv:E (1.83) BS01 IMP N/A N/A D0CF46 39207111
    919737 9auv:E (1.83) BS02 VOA N/A N/A D0CF46 39207111
    919738 9auv:E (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919739 9auv:F (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919740 9auv:F (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919741 9auv:F (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919742 9auv:G (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919743 9auv:G (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919744 9auv:G (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919745 9auv:H (1.83) BS01 VOA N/A N/A D0CF46 39207111
    919746 9auv:H (1.83) BS02 IMP N/A N/A D0CF46 39207111
    919747 9auv:H (1.83) BS03 VOA N/A N/A D0CF46 39207111
    919748 9auw:A (2.3) BS01 IMP N/A N/A A0A059ZJE9 39207111
    919749 9auw:A (2.3) BS02 VP4 N/A N/A A0A059ZJE9 39207111
    919750 9auw:A (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919751 9auw:B (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919752 9auw:B (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919753 9auw:B (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919754 9auw:C (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919755 9auw:C (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919756 9auw:C (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919757 9auw:D (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919758 9auw:D (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919759 9auw:D (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919760 9auw:E (2.3) BS01 IMP N/A N/A A0A059ZJE9 39207111
    919761 9auw:E (2.3) BS02 VP4 N/A N/A A0A059ZJE9 39207111
    919762 9auw:E (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919763 9auw:F (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919764 9auw:F (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919765 9auw:F (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919766 9auw:G (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919767 9auw:G (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919768 9auw:G (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919769 9auw:H (2.3) BS01 VP4 N/A N/A A0A059ZJE9 39207111
    919770 9auw:H (2.3) BS02 IMP N/A N/A A0A059ZJE9 39207111
    919771 9auw:H (2.3) BS03 VP4 N/A N/A A0A059ZJE9 39207111
    919772 9aux:A (2.46) BS01 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919773 9aux:A (2.46) BS02 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919774 9aux:A (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919775 9aux:B (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919776 9aux:B (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919777 9aux:B (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919778 9aux:C (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919779 9aux:C (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919780 9aux:C (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919781 9aux:D (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919782 9aux:D (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919783 9aux:D (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919784 9aux:E (2.46) BS01 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919785 9aux:E (2.46) BS02 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919786 9aux:E (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919787 9aux:F (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919788 9aux:F (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919789 9aux:F (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919790 9aux:G (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919791 9aux:G (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919792 9aux:G (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919793 9aux:H (2.46) BS01 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919794 9aux:H (2.46) BS02 IMP N/A N/A A0A059ZJE9
    P31002
    39207111
    919795 9aux:H (2.46) BS03 A1AG0 N/A N/A A0A059ZJE9
    P31002
    39207111
    919796 9auy:A (1.94) BS01 IMP N/A N/A Q2FJM6 39207111
    919797 9auy:A (1.94) BS02 VOA N/A N/A Q2FJM6 39207111
    919798 9auz:A (1.94) BS01 IMP N/A N/A Q2FJM6 39207111
    919799 9auz:A (1.94) BS02 VP4 N/A N/A Q2FJM6 39207111
    919800 9av0:A (2.2) BS01 IMP N/A N/A Q2G0Y7 39207111

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).