SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    919801 9av0:A (2.2) BS02 A1AG0 N/A N/A Q2G0Y7 39207111
    919802 9av1:A (1.7) BS01 IMP N/A N/A P0ADG8 39207111
    919803 9av1:A (1.7) BS02 VOA N/A N/A P0ADG8 39207111
    919804 9av2:A (1.7) BS01 IMP N/A N/A P0ADG8 39207111
    919805 9av2:A (1.7) BS02 VP4 N/A N/A P0ADG8 39207111
    919806 9av3:A (1.82) BS01 IMP N/A N/A P0ADG8 39207111
    919807 9av3:A (1.82) BS02 A1AG0 N/A N/A P0ADG8 39207111
    919808 9av4:A (2.09) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919809 9av4:A (2.09) BS02 A1AG4 N/A N/A A0A8C0PP93 39746932
    919810 9av4:B (2.09) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919811 9av4:B (2.09) BS02 A1AG4 N/A N/A A0A8C0PP93 39746932
    919812 9av5:A (2.363) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919813 9av5:A (2.363) BS02 A1AG5 N/A N/A A0A8C0PP93 39746932
    919814 9av5:B (2.363) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919815 9av5:B (2.363) BS02 A1AG5 N/A N/A A0A8C0PP93 39746932
    919816 9av7:A (2.1) BS01 ANP 2.7.11.1 GO:0004672 ... A2F9N1 N/A
    919817 9av8:A (2.592) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919818 9av8:A (2.592) BS02 A1AG6 N/A N/A A0A8C0PP93 39746932
    919819 9av8:B (2.592) BS01 NAD N/A N/A A0A8C0PP93 39746932
    919820 9av9:A (1.94) BS01 HEM N/A N/A N/A 39920120
    919821 9av9:B (1.94) BS01 HEM N/A N/A N/A 39920120
    919822 9av9:C (1.94) BS01 HEM N/A N/A N/A 39920120
    919823 9av9:D (1.94) BS01 HEM N/A N/A N/A 39920120
    919824 9ava:A (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919825 9ava:B (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919826 9ava:C (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919827 9ava:D (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919828 9ava:E (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919829 9ava:F (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919830 9ava:F (2.3) BS02 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919831 9ava:G (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919832 9ava:H (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919833 9ava:I (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919834 9ava:J (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919835 9ava:K (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919836 9ava:L (2.3) BS01 A1AG1 3.1.11.2 GO:0003676 ... Q9NSU2 N/A
    919837 9avg:Q (3.6) BS01 TCR ? GO:0004930 ... P41180 38632411
    919838 9avg:Q (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    919839 9avg:Q (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    919840 9avg:Q (3.6) BS04 9IG ? GO:0004930 ... P41180 38632411
    919841 9avg:Q (3.6) BS05 Y01 ? GO:0004930 ... P41180 38632411
    919842 9avg:Q (3.6) BS06 A1AF7 ? GO:0004930 ... P41180 38632411
    919843 9avg:R (3.6) BS01 Y01 ? GO:0004930 ... P41180 38632411
    919844 9avg:R (3.6) BS02 TCR ? GO:0004930 ... P41180 38632411
    919845 9avg:R (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    919846 9avg:R (3.6) BS04 CA ? GO:0004930 ... P41180 38632411
    919847 9avg:R (3.6) BS05 CA ? GO:0004930 ... P41180 38632411
    919848 9avg:R (3.6) BS06 9IG ? GO:0004930 ... P41180 38632411
    919849 9avg:R (3.6) BS07 A1AF7 ? GO:0004930 ... P41180 38632411
    919850 9avh:A (1.8) BS01 FAD N/A N/A N/A 39161354
    919851 9avh:A (1.8) BS02 ANN N/A N/A N/A 39161354
    919852 9avj:A (3.72) BS01 ANP N/A GO:0005524 ... P09219 39428050
    919853 9avj:B (3.72) BS01 ANP N/A GO:0005524 ... P09219 39428050
    919854 9avj:C (3.72) BS01 ANP N/A GO:0005524 ... P09219 39428050
    919855 9avj:D (3.72) BS01 ANP N/A GO:0005515 ... P07677 39428050
    919856 9avj:D (3.72) BS02 MG N/A GO:0005515 ... P07677 39428050
    919857 9avj:F (3.72) BS01 ANP N/A GO:0005515 ... P07677 39428050
    919858 9avl:Q (3.8) BS01 TCR ? GO:0004930 ... P41180 38632411
    919859 9avl:Q (3.8) BS02 CA ? GO:0004930 ... P41180 38632411
    919860 9avl:Q (3.8) BS03 9IG ? GO:0004930 ... P41180 38632411
    919861 9avl:Q (3.8) BS04 Y01 ? GO:0004930 ... P41180 38632411
    919862 9avl:Q (3.8) BS05 A1AF7 ? GO:0004930 ... P41180 38632411
    919863 9avl:R (3.8) BS01 TCR ? GO:0004930 ... P41180 38632411
    919864 9avl:R (3.8) BS02 CA ? GO:0004930 ... P41180 38632411
    919865 9avl:R (3.8) BS03 CA ? GO:0004930 ... P41180 38632411
    919866 9avl:R (3.8) BS04 9IG ? GO:0004930 ... P41180 38632411
    919867 9avl:R (3.8) BS05 A1AF7 ? GO:0004930 ... P41180 38632411
    919868 9avq:A (2.58) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 39236245
    919869 9avr:A (1.91) BS01 rna N/A GO:0000339 ... P60842 N/A
    919870 9avr:A (1.91) BS02 ANP N/A GO:0000339 ... P60842 N/A
    919871 9avr:A (1.91) BS03 A1AG8 N/A GO:0000339 ... P60842 N/A
    919872 9avt:C (1.5) BS01 ZN N/A N/A Q9NYJ8 N/A
    919873 9avu:A (2.45) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919874 9avu:A (2.45) BS02 ACH N/A GO:0004888 ... P02709 39085615
    919875 9avu:B (2.45) BS01 ACH N/A GO:0004888 ... P13536 39085615
    919876 9avu:C (2.45) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919877 9avu:C (2.45) BS02 ACH N/A GO:0004888 ... P02709 39085615
    919878 9avu:D (2.45) BS01 ACH N/A GO:0004888 ... P04759 39085615
    919879 9avv:C (2.09) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919880 9avv:D (2.09) BS01 MAN N/A GO:0004888 ... P04759 39085615
    919881 9avv:F (2.09) BS01 MAN N/A GO:0005576 ... N/A 39085615
    919882 9avv:G (2.09) BS01 MAN N/A GO:0005576 ... N/A 39085615
    919883 9avw:C (1.747) BS01 ZN N/A N/A Q9NYJ8 N/A
    919884 9awj:A (2.45) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919885 9awj:A (2.45) BS02 ACH N/A GO:0004888 ... P02709 39085615
    919886 9awj:B (2.45) BS01 ACH N/A GO:0004888 ... P02715 39085615
    919887 9awj:C (2.45) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919888 9awj:C (2.45) BS02 ACH N/A GO:0004888 ... P02709 39085615
    919889 9awj:D (2.45) BS01 ACH N/A GO:0004888 ... P04759 39085615
    919890 9awk:A (2.14) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919891 9awk:C (2.14) BS01 MAN N/A GO:0004888 ... P02709 39085615
    919892 9awk:D (2.14) BS01 MAN N/A GO:0004888 ... P04759 39085615
    919893 9awk:F (2.14) BS01 MAN N/A GO:0005576 ... N/A 39085615
    919894 9awk:G (2.14) BS01 MAN N/A GO:0005576 ... N/A 39085615
    919895 9awt:A (2.3) BS01 ZN N/A N/A P0DTR5 N/A
    919896 9awt:A (2.3) BS02 CO N/A N/A P0DTR5 N/A
    919897 9awt:A (2.3) BS03 MN N/A N/A P0DTR5 N/A
    919898 9awt:A (2.3) BS04 A1AHC N/A N/A P0DTR5 N/A
    919899 9awt:B (2.3) BS01 ZN N/A N/A P0DTR5 N/A
    919900 9awt:B (2.3) BS02 CO N/A N/A P0DTR5 N/A
    919901 9awt:B (2.3) BS03 MN N/A N/A P0DTR5 N/A
    919902 9awt:B (2.3) BS04 A1AHC N/A N/A P0DTR5 N/A
    919903 9awt:C (2.3) BS01 ZN N/A N/A P0DTR5 N/A
    919904 9awt:C (2.3) BS02 CO N/A N/A P0DTR5 N/A
    919905 9awt:C (2.3) BS03 MN N/A N/A P0DTR5 N/A
    919906 9awt:C (2.3) BS04 A1AHC N/A N/A P0DTR5 N/A
    919907 9awt:D (2.3) BS01 ZN N/A N/A P0DTR5 N/A
    919908 9awt:D (2.3) BS02 CO N/A N/A P0DTR5 N/A
    919909 9awt:D (2.3) BS03 MN N/A N/A P0DTR5 N/A
    919910 9awt:D (2.3) BS04 A1AHC N/A N/A P0DTR5 N/A
    919911 9awt:E (2.3) BS01 ZN N/A N/A P0DTR5 N/A
    919912 9awt:E (2.3) BS02 CO N/A N/A P0DTR5 N/A
    919913 9awt:E (2.3) BS03 MN N/A N/A P0DTR5 N/A
    919914 9awt:E (2.3) BS04 A1AHC N/A N/A P0DTR5 N/A
    919915 9awx:A (1.81) BS01 A1AHP N/A N/A N/A 39626211
    919916 9awx:B (1.81) BS01 A1AHP N/A N/A N/A 39626211
    919917 9awx:C (1.81) BS01 A1AHP N/A N/A N/A 39626211
    919918 9awx:D (1.81) BS01 A1AHP N/A N/A N/A 39626211
    919919 9awy:A (1.7) BS01 A1AH0 N/A N/A N/A 39626211
    919920 9awy:B (1.7) BS01 A1AH0 N/A N/A N/A 39626211
    919921 9awy:C (1.7) BS01 A1AH0 N/A N/A N/A 39626211
    919922 9awy:D (1.7) BS01 A1AH0 N/A N/A N/A 39626211
    919923 9ax1:A (2.0) BS01 A1AH2 N/A N/A N/A 39626211
    919924 9ax1:B (2.0) BS01 A1AH2 N/A N/A N/A 39626211
    919925 9ax1:C (2.0) BS01 A1AH2 N/A N/A N/A 39626211
    919926 9ax1:D (2.0) BS01 A1AH2 N/A N/A N/A 39626211
    919927 9ax2:A (1.94) BS01 A1AH6 N/A N/A N/A 39626211
    919928 9ax2:B (1.94) BS01 A1AH6 N/A N/A N/A 39626211
    919929 9ax2:C (1.94) BS01 A1AH6 N/A N/A N/A 39626211
    919930 9ax2:D (1.94) BS01 A1AH6 N/A N/A N/A 39626211
    919931 9ax3:A (2.2) BS01 A1AH1 N/A N/A N/A 39626211
    919932 9ax3:B (2.2) BS01 A1AH1 N/A N/A N/A 39626211
    919933 9ax3:C (2.2) BS01 A1AH1 N/A N/A N/A 39626211
    919934 9ax3:D (2.2) BS01 A1AH1 N/A N/A N/A 39626211
    919935 9ax6:A (1.65) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38593348
    919936 9ax6:A (1.65) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38593348
    919937 9ax6:A (1.65) BS03 A1AHB 3.6.5.2 GO:0003924 ... P01116 38593348
    919938 9ax6:B (1.65) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38593348
    919939 9ax6:B (1.65) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38593348
    919940 9ax6:B (1.65) BS03 A1AHB 3.6.5.2 GO:0003924 ... P01116 38593348
    919941 9ax6:C (1.65) BS01 A1AHB 5.2.1.8 GO:0000413 ... P62937 38593348
    919942 9ax6:D (1.65) BS01 A1AHB 5.2.1.8 GO:0000413 ... P62937 38593348
    919943 9ax7:0 (2.63) BS01 rna N/A GO:0003735 ... C3SME7 39222680
    919944 9ax7:1 (2.63) BS01 rna N/A GO:0003735 ... B7MGC4 39222680
    919945 9ax7:2 (2.63) BS01 rna N/A GO:0002181 ... P0A7Q1 39222680
    919946 9ax7:3 (2.63) BS01 rna N/A GO:0003735 ... A0A0E2L017 39222680
    919947 9ax7:3 (2.63) BS02 ZN N/A GO:0003735 ... A0A0E2L017 39222680
    919948 9ax7:4 (2.63) BS01 rna N/A GO:0003735 ... P0A7N0 39222680
    919949 9ax7:4 (2.63) BS02 ZN N/A GO:0003735 ... P0A7N0 39222680
    919950 9ax7:B (2.63) BS01 rna N/A GO:0003735 ... C3TPN2 39222680
    919951 9ax7:C (2.63) BS01 rna N/A GO:0003676 ... B7MCS9 39222680
    919952 9ax7:D (2.63) BS01 rna N/A GO:0000028 ... P0A7V8 39222680
    919953 9ax7:E (2.63) BS01 rna N/A GO:0000028 ... P0A7W1 39222680
    919954 9ax7:F (2.63) BS01 rna N/A GO:0002181 ... P02358 39222680
    919955 9ax7:G (2.63) BS01 rna N/A GO:0000028 ... P02359 39222680
    919956 9ax7:G (2.63) BS02 rna N/A GO:0000028 ... P02359 39222680
    919957 9ax7:H (2.63) BS01 rna N/A GO:0000028 ... C3SR12 39222680
    919958 9ax7:I (2.63) BS01 rna N/A GO:0000028 ... C3SRY2 39222680
    919959 9ax7:I (2.63) BS02 rna N/A GO:0000028 ... C3SRY2 39222680
    919960 9ax7:J (2.63) BS01 rna N/A GO:0000028 ... C3SQT7 39222680
    919961 9ax7:K (2.63) BS01 rna N/A GO:0000028 ... C3SR57 39222680
    919962 9ax7:K (2.63) BS02 IAS N/A GO:0000028 ... C3SR57 39222680
    919963 9ax7:L (2.63) BS01 rna N/A GO:0000049 ... A0A0F1AUC4 39222680
    919964 9ax7:M (2.63) BS01 rna N/A GO:0000049 ... A0A7U9IV78 39222680
    919965 9ax7:M (2.63) BS02 rna N/A GO:0000049 ... A0A7U9IV78 39222680
    919966 9ax7:N (2.63) BS01 rna N/A GO:0003735 ... A0A2X1PQW4 39222680
    919967 9ax7:O (2.63) BS01 rna N/A GO:0000028 ... C3SSQ7 39222680
    919968 9ax7:O (2.63) BS02 rna N/A GO:0000028 ... C3SSQ7 39222680
    919969 9ax7:P (2.63) BS01 rna N/A GO:0000028 ... C3SYP2 39222680
    919970 9ax7:Q (2.63) BS01 rna N/A GO:0000028 ... C3SQY7 39222680
    919971 9ax7:R (2.63) BS01 rna N/A GO:0003735 ... A0A0E2KXL3 39222680
    919972 9ax7:S (2.63) BS01 rna N/A GO:0000028 ... C3SQW2 39222680
    919973 9ax7:T (2.63) BS01 rna N/A GO:0000028 ... C3TRH7 39222680
    919974 9ax7:U (2.63) BS01 rna N/A GO:0003735 ... A0A0E2L2J1 39222680
    919975 9ax7:c (2.63) BS01 rna N/A GO:0000027 ... P60422 39222680
    919976 9ax7:d (2.63) BS01 rna N/A GO:0003735 ... C3SQU2 39222680
    919977 9ax7:e (2.63) BS01 rna N/A GO:0003735 ... A1AGK6 39222680
    919978 9ax7:f (2.63) BS01 rna N/A GO:0000049 ... A0A140N5A3 39222680
    919979 9ax7:f (2.63) BS02 rna N/A GO:0000049 ... A0A140N5A3 39222680
    919980 9ax7:f (2.63) BS03 rna N/A GO:0000049 ... A0A140N5A3 39222680
    919981 9ax7:g (2.63) BS01 rna N/A GO:0002181 ... C3SR17 39222680
    919982 9ax7:h (2.63) BS01 rna N/A GO:0003735 ... C3SFP2 39222680
    919983 9ax7:i (2.63) BS01 rna N/A GO:0003729 ... P0AA12 39222680
    919984 9ax7:j (2.63) BS01 rna N/A GO:0003735 ... S1NW45 39222680
    919985 9ax7:j (2.63) BS02 rna N/A GO:0003735 ... S1NW45 39222680
    919986 9ax7:k (2.63) BS01 rna N/A GO:0003735 ... A0A037Y8L6 39222680
    919987 9ax7:l (2.63) BS01 rna N/A GO:0000049 ... A1AGK1 39222680
    919988 9ax7:l (2.63) BS02 rna N/A GO:0000049 ... A1AGK1 39222680
    919989 9ax7:m (2.63) BS01 rna N/A GO:0003735 ... C3SR72 39222680
    919990 9ax7:n (2.63) BS01 rna N/A GO:0003735 ... A0A828U007 39222680
    919991 9ax7:n (2.63) BS02 rna N/A GO:0003735 ... A0A828U007 39222680
    919992 9ax7:o (2.63) BS01 rna N/A GO:0003735 ... P0A7K8 39222680
    919993 9ax7:o (2.63) BS02 rna N/A GO:0003735 ... P0A7K8 39222680
    919994 9ax7:p (2.63) BS01 rna N/A GO:0000027 ... B7MAS6 39222680
    919995 9ax7:q (2.63) BS01 rna N/A GO:0003723 ... C3SSG2 39222680
    919996 9ax7:r (2.63) BS01 rna N/A GO:0002181 ... P61175 39222680
    919997 9ax7:s (2.63) BS01 rna N/A GO:0003735 ... C3SQV2 39222680
    919998 9ax7:t (2.63) BS01 rna N/A GO:0003723 ... C3SQZ7 39222680
    919999 9ax7:u (2.63) BS01 rna N/A GO:0000027 ... P68919 39222680
    920000 9ax7:v (2.63) BS01 rna N/A GO:0003735 ... P0A7M0 39222680

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).