SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    919801 8xtz:B (1.85) BS02 FAD N/A GO:0071949 ... B5M9L6 40199722
    919802 8xu1:A (2.46) BS01 OAA N/A GO:0046912 ... A0A7C6A739 N/A
    919803 8xu1:B (2.46) BS01 OAA N/A GO:0046912 ... A0A7C6A739 N/A
    919804 8xu1:C (2.46) BS01 OAA N/A GO:0046912 ... A0A7C6A739 N/A
    919805 8xu3:A (1.82) BS01 NPO N/A GO:0005737 ... A0A2P4SYK2 41547513
    919806 8xu3:A (1.82) BS02 A3P N/A GO:0005737 ... A0A2P4SYK2 41547513
    919807 8xu6:A (1.628) BS01 ZN N/A GO:0003714 ... Q15326 N/A
    919808 8xu6:A (1.628) BS02 ZN N/A GO:0003714 ... Q15326 N/A
    919809 8xu7:A (2.2) BS01 FAD N/A GO:0071949 ... B5M9L6 40199722
    919810 8xu7:A (2.2) BS02 LSB N/A GO:0071949 ... B5M9L6 40199722
    919811 8xu7:B (2.2) BS01 FAD N/A GO:0071949 ... B5M9L6 40199722
    919812 8xu7:B (2.2) BS02 LSB N/A GO:0071949 ... B5M9L6 40199722
    919813 8xu7:B (2.2) BS03 LSB N/A GO:0071949 ... B5M9L6 40199722
    919814 8xu8:D (3.4) BS01 rna N/A GO:0002181 ... P0CX45 39789210
    919815 8xu8:D (3.4) BS02 rna N/A GO:0002181 ... P0CX45 39789210
    919816 8xu8:E (3.4) BS01 rna N/A GO:0000027 ... P14126 39789210
    919817 8xu8:F (3.4) BS01 rna N/A GO:0002181 ... P10664 39789210
    919818 8xu8:F (3.4) BS02 rna N/A GO:0002181 ... P10664 39789210
    919819 8xu8:G (3.4) BS01 rna N/A GO:0000027 ... P26321 39789210
    919820 8xu8:G (3.4) BS02 rna N/A GO:0000027 ... P26321 39789210
    919821 8xu8:H (3.4) BS01 rna N/A GO:0000027 ... P05739 39789210
    919822 8xu8:I (3.4) BS01 rna N/A GO:0000463 ... P05737 39789210
    919823 8xu8:I (3.4) BS02 rna N/A GO:0000463 ... P05737 39789210
    919824 8xu8:J (3.4) BS01 rna N/A GO:0000470 ... P17076 39789210
    919825 8xu8:J (3.4) BS02 rna N/A GO:0000470 ... P17076 39789210
    919826 8xu8:K (3.4) BS01 rna N/A GO:0002181 ... P05738 39789210
    919827 8xu8:L (3.4) BS01 rna N/A GO:0000027 ... P41805 39789210
    919828 8xu8:L (3.4) BS02 rna N/A GO:0000027 ... P41805 39789210
    919829 8xu8:L (3.4) BS03 rna N/A GO:0000027 ... P41805 39789210
    919830 8xu8:L (3.4) BS04 rna N/A GO:0000027 ... P41805 39789210
    919831 8xu8:M (3.4) BS01 rna N/A GO:0000027 ... Q3E757 39789210
    919832 8xu8:M (3.4) BS02 rna N/A GO:0000027 ... Q3E757 39789210
    919833 8xu8:M (3.4) BS03 rna N/A GO:0000027 ... Q3E757 39789210
    919834 8xu8:N (3.4) BS01 rna N/A GO:0002181 ... Q12690 39789210
    919835 8xu8:O (3.4) BS01 rna N/A GO:0000027 ... P36105 39789210
    919836 8xu8:P (3.4) BS01 rna N/A GO:0000470 ... P05748 39789210
    919837 8xu8:P (3.4) BS02 rna N/A GO:0000470 ... P05748 39789210
    919838 8xu8:Q (3.4) BS01 rna N/A GO:0000470 ... P26784 39789210
    919839 8xu8:R (3.4) BS01 rna N/A GO:0000448 ... P05740 39789210
    919840 8xu8:R (3.4) BS02 rna N/A GO:0000448 ... P05740 39789210
    919841 8xu8:S (3.4) BS01 rna N/A GO:0002181 ... P0CX49 39789210
    919842 8xu8:SA (3.4) BS01 rna N/A GO:0000054 ... P05750 39789210
    919843 8xu8:SB (3.4) BS01 rna N/A GO:0000054 ... P26783 39789210
    919844 8xu8:SC (3.4) BS01 rna N/A N/A Q08745 39789210
    919845 8xu8:SD (3.4) BS01 rna N/A GO:0003735 ... P48589 39789210
    919846 8xu8:SE (3.4) BS01 rna N/A GO:0003723 ... Q01855 39789210
    919847 8xu8:SF (3.4) BS01 rna N/A GO:0000462 ... P0CX51 39789210
    919848 8xu8:SG (3.4) BS01 rna N/A GO:0003735 ... P02407 39789210
    919849 8xu8:SH (3.4) BS01 rna N/A GO:0000054 ... P0CX55 39789210
    919850 8xu8:SI (3.4) BS01 rna N/A GO:0000054 ... P07280 39789210
    919851 8xu8:SJ (3.4) BS01 rna N/A GO:0003723 ... P38701 39789210
    919852 8xu8:SK (3.4) BS01 rna N/A GO:0002181 ... Q3E792 39789210
    919853 8xu8:SK (3.4) BS02 rna N/A GO:0002181 ... Q3E792 39789210
    919854 8xu8:SL (3.4) BS01 rna N/A GO:0000028 ... Q3E7X9 39789210
    919855 8xu8:SM (3.4) BS01 rna N/A GO:0002181 ... P41057 39789210
    919856 8xu8:SN (3.4) BS01 rna N/A GO:0003735 ... P05759 39789210
    919857 8xu8:SO (3.4) BS01 rna N/A GO:0001965 ... P38011 39789210
    919858 8xu8:SP (3.4) BS01 rna N/A GO:0003735 ... P32905 39789210
    919859 8xu8:SQ (3.4) BS01 rna N/A GO:0000462 ... P33442 39789210
    919860 8xu8:SR (3.4) BS01 rna N/A GO:0003723 ... P25443 39789210
    919861 8xu8:SS (3.4) BS01 rna N/A GO:0002181 ... P0CX35 39789210
    919862 8xu8:ST (3.4) BS01 rna N/A GO:0000462 ... P0CX37 39789210
    919863 8xu8:SU (3.4) BS01 rna N/A GO:0002181 ... P26786 39789210
    919864 8xu8:SV (3.4) BS01 rna N/A GO:0000462 ... P0CX39 39789210
    919865 8xu8:SV (3.4) BS02 rna N/A GO:0000462 ... P0CX39 39789210
    919866 8xu8:SW (3.4) BS01 rna N/A GO:0000462 ... O13516 39789210
    919867 8xu8:SX (3.4) BS01 rna N/A GO:0000028 ... P0CX47 39789210
    919868 8xu8:SY (3.4) BS01 rna N/A GO:0000462 ... P05756 39789210
    919869 8xu8:SZ (3.4) BS01 rna N/A GO:0000028 ... P39516 39789210
    919870 8xu8:Sa (3.4) BS01 rna N/A GO:0000447 ... P0C0V8 39789210
    919871 8xu8:Sb (3.4) BS01 rna N/A GO:0002181 ... P0C0W1 39789210
    919872 8xu8:Sc (3.4) BS01 rna N/A GO:0000462 ... P0CX29 39789210
    919873 8xu8:Sd (3.4) BS01 rna N/A GO:0000462 ... P0CX31 39789210
    919874 8xu8:Se (3.4) BS01 rna N/A GO:0003735 ... P39938 39789210
    919875 8xu8:Sf (3.4) BS01 rna N/A GO:0000028 ... P35997 39789210
    919876 8xu8:Sg (3.4) BS01 rna N/A GO:0002181 ... P0CX33 39789210
    919877 8xu8:T (3.4) BS01 rna N/A GO:0002181 ... P0CX82 39789210
    919878 8xu8:T (3.4) BS02 rna N/A GO:0002181 ... P0CX82 39789210
    919879 8xu8:U (3.4) BS01 rna N/A GO:0002181 ... P0CX23 39789210
    919880 8xu8:U (3.4) BS02 rna N/A GO:0002181 ... P0CX23 39789210
    919881 8xu8:V (3.4) BS01 rna N/A GO:0002181 ... Q02753 39789210
    919882 8xu8:V (3.4) BS02 rna N/A GO:0002181 ... Q02753 39789210
    919883 8xu8:W (3.4) BS01 rna N/A GO:0003735 ... P05749 39789210
    919884 8xu8:X (3.4) BS01 rna N/A GO:0002181 ... P0CX41 39789210
    919885 8xu8:Y (3.4) BS01 rna N/A GO:0003735 ... P04449 39789210
    919886 8xu8:Z (3.4) BS01 rna N/A GO:0003735 ... P04456 39789210
    919887 8xu8:Z (3.4) BS02 rna N/A GO:0003735 ... P04456 39789210
    919888 8xu8:a (3.4) BS01 rna N/A GO:0002181 ... P05743 39789210
    919889 8xu8:a (3.4) BS02 rna N/A GO:0002181 ... P05743 39789210
    919890 8xu8:b (3.4) BS01 rna N/A GO:0002181 ... P0C2H6 39789210
    919891 8xu8:c (3.4) BS01 rna N/A GO:0002181 ... P02406 39789210
    919892 8xu8:d (3.4) BS01 rna N/A GO:0002181 ... P05747 39789210
    919893 8xu8:e (3.4) BS01 rna N/A GO:0002181 ... P14120 39789210
    919894 8xu8:f (3.4) BS01 rna N/A GO:0002181 ... P0C2H8 39789210
    919895 8xu8:g (3.4) BS01 rna N/A GO:0002181 ... P38061 39789210
    919896 8xu8:h (3.4) BS01 rna N/A GO:0000027 ... P05744 39789210
    919897 8xu8:i (3.4) BS01 rna N/A GO:0002181 ... P87262 39789210
    919898 8xu8:j (3.4) BS01 rna N/A GO:0000463 ... P0CX84 39789210
    919899 8xu8:j (3.4) BS02 rna N/A GO:0000463 ... P0CX84 39789210
    919900 8xu8:k (3.4) BS01 rna N/A GO:0000470 ... P05745 39789210
    919901 8xu8:l (3.4) BS01 rna N/A GO:0000448 ... P49166 39789210
    919902 8xu8:l (3.4) BS02 rna N/A GO:0000448 ... P49166 39789210
    919903 8xu8:m (3.4) BS01 rna N/A GO:0002181 ... P49167 39789210
    919904 8xu8:n (3.4) BS01 rna N/A GO:0002181 ... P04650 39789210
    919905 8xu8:n (3.4) BS02 rna N/A GO:0002181 ... P04650 39789210
    919906 8xu8:o (3.4) BS01 rna N/A GO:0003735 ... P0CH08 39789210
    919907 8xu8:q (3.4) BS01 rna N/A GO:0002181 ... P0CX27 39789210
    919908 8xu8:r (3.4) BS01 rna N/A GO:0002181 ... P0CX25 39789210
    919909 8xu8:x (3.4) BS01 rna N/A GO:0003746 ... P32324 39789210
    919910 8xu8:x (3.4) BS02 rna N/A GO:0003746 ... P32324 39789210
    919911 8xu9:A (2.217) BS01 CO N/A GO:0003868 ... P93836 N/A
    919912 8xu9:A (2.217) BS02 A1LW4 N/A GO:0003868 ... P93836 N/A
    919913 8xua:A (2.7) BS01 C8E N/A N/A K5UDK4 N/A
    919914 8xua:A (2.7) BS02 C8E N/A N/A K5UDK4 N/A
    919915 8xua:A (2.7) BS03 C8E N/A N/A K5UDK4 N/A
    919916 8xua:A (2.7) BS04 C8E N/A N/A K5UDK4 N/A
    919917 8xua:A (2.7) BS05 C8E N/A N/A K5UDK4 N/A
    919918 8xua:B (2.7) BS01 C8E N/A N/A K5UDK4 N/A
    919919 8xua:B (2.7) BS02 C8E N/A N/A K5UDK4 N/A
    919920 8xua:B (2.7) BS03 C8E N/A N/A K5UDK4 N/A
    919921 8xua:B (2.7) BS04 C8E N/A N/A K5UDK4 N/A
    919922 8xua:C (2.7) BS01 C8E N/A N/A K5UDK4 N/A
    919923 8xua:C (2.7) BS02 C8E N/A N/A K5UDK4 N/A
    919924 8xua:C (2.7) BS03 C8E N/A N/A K5UDK4 N/A
    919925 8xua:C (2.7) BS04 C8E N/A N/A K5UDK4 N/A
    919926 8xua:D (2.7) BS01 C8E N/A N/A K5UDK4 N/A
    919927 8xuc:A (1.81) BS01 CO N/A GO:0003868 ... P93836 N/A
    919928 8xuc:A (1.81) BS02 A1LW5 N/A GO:0003868 ... P93836 N/A
    919929 8xud:C (3.49) BS01 peptide 3.4.21.102 GO:0006508 ... P23865 38937433
    919930 8xud:D (3.49) BS01 peptide 3.4.21.102 GO:0006508 ... P23865 38937433
    919931 8xue:A (2.218) BS01 CO N/A GO:0003868 ... P93836 N/A
    919932 8xue:A (2.218) BS02 A1LW6 N/A GO:0003868 ... P93836 N/A
    919933 8xuf:C (2.3) BS01 dna N/A GO:0003677 ... Q8W1E3 40263610
    919934 8xuf:C (2.3) BS02 dna N/A GO:0003677 ... Q8W1E3 40263610
    919935 8xuf:C (2.3) BS03 ZN N/A GO:0003677 ... Q8W1E3 40263610
    919936 8xuf:D (2.3) BS01 dna N/A GO:0003677 ... Q8W1E3 40263610
    919937 8xuf:D (2.3) BS02 dna N/A GO:0003677 ... Q8W1E3 40263610
    919938 8xuf:D (2.3) BS03 ZN N/A GO:0003677 ... Q8W1E3 40263610
    919939 8xug:A (1.893) BS01 CO N/A GO:0003868 ... P93836 N/A
    919940 8xug:A (1.893) BS02 A1LW7 N/A GO:0003868 ... P93836 N/A
    919941 8xul:A (2.5) BS01 BGC N/A N/A Q8P8N3 40411428
    919942 8xul:A (2.5) BS02 BGC N/A N/A Q8P8N3 40411428
    919943 8xul:A (2.5) BS03 BGC N/A N/A Q8P8N3 40411428
    919944 8xul:A (2.5) BS04 BGC N/A N/A Q8P8N3 40411428
    919945 8xul:A (2.5) BS05 BGC N/A N/A Q8P8N3 40411428
    919946 8xuo:A (2.84) BS01 ADP ? GO:0006952 ... A0A3Q7IF17 38866053
    919947 8xuo:A (2.84) BS02 IHP ? GO:0006952 ... A0A3Q7IF17 38866053
    919948 8xuo:G (2.84) BS01 ADP ? GO:0006952 ... A0A3Q7IF17 38866053
    919949 8xuo:G (2.84) BS02 IHP ? GO:0006952 ... A0A3Q7IF17 38866053
    919950 8xuq:A (3.17) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919951 8xuq:A (3.17) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919952 8xuq:E (3.17) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919953 8xuq:E (3.17) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919954 8xuq:F (3.17) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919955 8xuq:F (3.17) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919956 8xuq:G (3.17) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919957 8xuq:G (3.17) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919958 8xus:B (3.18) BS01 IDU N/A GO:0005515 ... P0DTC2 39071099
    919959 8xut:A (3.2) BS01 IDU N/A GO:0016020 ... P0DTC2 39071099
    919960 8xut:B (3.2) BS01 IDU N/A GO:0016020 ... P0DTC2 39071099
    919961 8xuu:A (3.69) BS01 IDU N/A GO:0005515 ... P0DTC2 39071099
    919962 8xuv:A (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919963 8xuv:A (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919964 8xuv:B (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919965 8xuv:B (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919966 8xuv:C (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919967 8xuv:C (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919968 8xuv:D (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919969 8xuv:D (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919970 8xuv:E (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919971 8xuv:E (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919972 8xuv:F (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919973 8xuv:F (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919974 8xuv:G (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919975 8xuv:G (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919976 8xuv:H (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919977 8xuv:H (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919978 8xuv:I (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919979 8xuv:I (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919980 8xuv:J (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919981 8xuv:J (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919982 8xuv:K (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919983 8xuv:K (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919984 8xuv:L (3.6) BS01 IHP ? GO:0005886 ... A0A3Q7IF17 38866053
    919985 8xuv:L (3.6) BS02 ADP ? GO:0005886 ... A0A3Q7IF17 38866053
    919986 8xuy:D (3.14) BS01 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919987 8xuy:D (3.14) BS02 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919988 8xuy:O (3.14) BS01 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919989 8xuz:L (3.05) BS01 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919990 8xuz:L (3.05) BS02 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919991 8xv0:A (3.0) BS01 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919992 8xv1:D (3.05) BS01 MAN N/A GO:0006508 ... Q9BYF1 39375326
    919993 8xv2:A (3.7) BS01 VIB ? GO:0005506 ... P0ABE7
    Q9BZV2
    38503960
    919994 8xv3:A (2.3) BS01 A1LWO N/A GO:0004114 ... Q9Y233 N/A
    919995 8xv3:A (2.3) BS02 ZN N/A GO:0004114 ... Q9Y233 N/A
    919996 8xv3:B (2.3) BS01 A1LWO N/A GO:0004114 ... Q9Y233 N/A
    919997 8xv3:B (2.3) BS02 ZN N/A GO:0004114 ... Q9Y233 N/A
    919998 8xv4:A (3.2) BS01 peptide N/A N/A Q96T88 39774694
    919999 8xv4:A (3.2) BS02 peptide N/A N/A Q96T88 39774694
    920000 8xv4:A (3.2) BS03 ZN N/A N/A Q96T88 39774694

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).