SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    921601 9b6f:A (3.42) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921602 9b6f:A (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921603 9b6f:A (3.42) BS03 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    921604 9b6f:B (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    921605 9b6f:B (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921606 9b6f:B (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921607 9b6f:C (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    921608 9b6f:C (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921609 9b6f:C (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921610 9b6f:D (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    921611 9b6f:D (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921612 9b6f:D (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921613 9b6g:A (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921614 9b6g:A (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921615 9b6g:A (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921616 9b6g:A (2.81) BS04 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    921617 9b6g:A (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921618 9b6g:A (2.81) BS06 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921619 9b6g:B (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921620 9b6g:B (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921621 9b6g:B (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921622 9b6g:B (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921623 9b6g:B (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921624 9b6g:B (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    921625 9b6g:C (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921626 9b6g:C (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921627 9b6g:C (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921628 9b6g:C (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921629 9b6g:C (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921630 9b6g:C (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    921631 9b6g:D (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921632 9b6g:D (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921633 9b6g:D (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921634 9b6g:D (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921635 9b6g:D (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921636 9b6g:D (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    921637 9b6h:A (2.76) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921638 9b6h:A (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921639 9b6h:A (2.76) BS03 ULO N/A GO:0005216 ... Q8R4D5 39093967
    921640 9b6h:A (2.76) BS04 T14 N/A GO:0005216 ... Q8R4D5 39093967
    921641 9b6h:A (2.76) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921642 9b6h:B (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    921643 9b6h:B (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921644 9b6h:B (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921645 9b6h:B (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921646 9b6h:B (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    921647 9b6h:C (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    921648 9b6h:C (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921649 9b6h:C (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921650 9b6h:C (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921651 9b6h:C (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    921652 9b6h:D (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    921653 9b6h:D (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921654 9b6h:D (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921655 9b6h:D (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    921656 9b6h:D (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    921657 9b6i:A (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921658 9b6i:A (3.26) BS02 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921659 9b6i:A (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921660 9b6i:A (3.26) BS04 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921661 9b6i:A (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921662 9b6i:A (3.26) BS06 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921663 9b6i:A (3.26) BS07 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921664 9b6i:B (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921665 9b6i:B (3.26) BS02 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921666 9b6i:B (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921667 9b6i:B (3.26) BS04 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921668 9b6i:B (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921669 9b6i:B (3.26) BS06 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921670 9b6i:B (3.26) BS07 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921671 9b6i:C (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921672 9b6i:C (3.26) BS02 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921673 9b6i:C (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921674 9b6i:C (3.26) BS04 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921675 9b6i:C (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921676 9b6i:C (3.26) BS06 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921677 9b6i:C (3.26) BS07 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921678 9b6i:D (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921679 9b6i:D (3.26) BS02 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921680 9b6i:D (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921681 9b6i:D (3.26) BS04 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921682 9b6i:D (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921683 9b6i:D (3.26) BS06 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    921684 9b6i:D (3.26) BS07 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    921685 9b6j:A (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921686 9b6j:A (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    921687 9b6j:B (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921688 9b6j:B (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    921689 9b6j:C (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921690 9b6j:C (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    921691 9b6j:D (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921692 9b6j:D (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    921693 9b6k:A (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921694 9b6k:B (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921695 9b6k:C (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921696 9b6k:D (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    921697 9b70:A (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    921698 9b70:B (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    921699 9b71:A (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    921700 9b71:B (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    921701 9b73:A (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    921702 9b73:A (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    921703 9b73:B (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    921704 9b73:B (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    921705 9b73:C (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    921706 9b73:C (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    921707 9b7a:A (1.71) BS01 ROA N/A N/A Q06830 39799115
    921708 9b7a:B (1.71) BS01 ROA N/A N/A Q06830 39799115
    921709 9b7y:A (2.51) BS01 dna N/A GO:0000976 ... P95251 39545866
    921710 9b7y:A (2.51) BS02 dna N/A GO:0000976 ... P95251 39545866
    921711 9b7y:D (2.51) BS01 dna N/A GO:0000976 ... P95251 39545866
    921712 9b7y:D (2.51) BS02 dna N/A GO:0000976 ... P95251 39545866
    921713 9b8h:A (3.8) BS01 BGC N/A N/A P37650 39242554
    921714 9b8o:H (3.2) BS01 peptide N/A GO:0005654 ... Q6P503 38900912
    921715 9b8o:a (3.2) BS01 MAN N/A GO:0000220 ... P25286 38900912
    921716 9b8o:a (3.2) BS02 GLC N/A GO:0000220 ... P25286 38900912
    921717 9b8o:a (3.2) BS03 WJP N/A GO:0000220 ... P25286 38900912
    921718 9b8o:a (3.2) BS04 LP3 N/A GO:0000220 ... P25286 38900912
    921719 9b8o:f (3.2) BS01 LP3 N/A GO:0004521 ... A0A8J8YMT9 38900912
    921720 9b8o:h (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921721 9b8o:i (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921722 9b8o:i (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921723 9b8o:i (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921724 9b8o:j (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921725 9b8o:j (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921726 9b8o:j (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921727 9b8o:j (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    921728 9b8o:k (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921729 9b8o:k (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921730 9b8o:k (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921731 9b8o:l (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921732 9b8o:l (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921733 9b8o:l (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921734 9b8o:m (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921735 9b8o:m (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921736 9b8o:m (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921737 9b8o:n (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921738 9b8o:n (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921739 9b8o:n (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921740 9b8o:n (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    921741 9b8o:n (3.2) BS05 CLR N/A GO:0000220 ... P63081 38900912
    921742 9b8o:o (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    921743 9b8o:o (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    921744 9b8o:o (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    921745 9b8p:A (3.2) BS01 ADP N/A GO:0000221 ... D4A133 38900912
    921746 9b8p:D (3.2) BS01 ADP N/A GO:0000221 ... P62815 38900912
    921747 9b8r:E (3.5) BS01 dna N/A N/A P21951 39088616
    921748 9b8r:E (3.5) BS02 dna N/A N/A P21951 39088616
    921749 9b8r:E (3.5) BS03 SF4 N/A N/A P21951 39088616
    921750 9b8s:A (5.01) BS01 dna N/A GO:0000082 ... Q07864 39245668
    921751 9b8s:A (5.01) BS02 dna N/A GO:0000082 ... Q07864 39245668
    921752 9b8s:A (5.01) BS03 SF4 N/A GO:0000082 ... Q07864 39245668
    921753 9b8t:A (2.95) BS01 dna N/A GO:0000082 ... Q07864 39245668
    921754 9b8t:A (2.95) BS02 dna N/A GO:0000082 ... Q07864 39245668
    921755 9b8t:A (2.95) BS03 TTP N/A GO:0000082 ... Q07864 39245668
    921756 9b8t:A (2.95) BS04 MG N/A GO:0000082 ... Q07864 39245668
    921757 9b8t:A (2.95) BS05 SF4 N/A GO:0000082 ... Q07864 39245668
    921758 9b8u:A (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    921759 9b8u:A (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    921760 9b8u:B (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    921761 9b8u:B (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    921762 9b8u:C (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    921763 9b8u:C (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    921764 9b8u:D (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    921765 9b8u:D (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    921766 9b8w:A (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921767 9b8w:A (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921768 9b8w:B (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921769 9b8w:B (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921770 9b8w:C (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921771 9b8w:C (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921772 9b8w:D (3.1) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921773 9b8w:D (3.1) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921774 9b8x:A (3.0) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921775 9b8x:A (3.0) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921776 9b8y:A (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921777 9b8y:A (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921778 9b8y:A (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    921779 9b8y:B (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921780 9b8y:B (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921781 9b8y:B (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    921782 9b8y:C (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921783 9b8y:C (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921784 9b8y:C (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    921785 9b8y:D (3.2) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921786 9b8y:D (3.2) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921787 9b8y:D (3.2) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    921788 9b8z:A (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921789 9b8z:A (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921790 9b8z:A (3.4) BS03 DVT ? GO:0002250 ... Q8TD43 38750366
    921791 9b90:A (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921792 9b90:A (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921793 9b90:A (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    921794 9b90:B (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921795 9b90:B (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921796 9b90:B (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    921797 9b90:C (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366
    921798 9b90:C (3.4) BS02 CA ? GO:0002250 ... Q8TD43 38750366
    921799 9b90:C (3.4) BS03 ATP ? GO:0002250 ... Q8TD43 38750366
    921800 9b90:D (3.4) BS01 CA ? GO:0002250 ... Q8TD43 38750366

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).