SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    922601 8y9d:C (2.45) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922602 8y9d:C (2.45) BS02 A1LYE N/A GO:0009820 ... A0A117NS29 39747040
    922603 8y9d:D (2.45) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922604 8y9d:D (2.45) BS02 A1LYE N/A GO:0009820 ... A0A117NS29 39747040
    922605 8y9f:B (3.3) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922606 8y9f:D (3.3) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922607 8y9f:E (3.3) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922608 8y9f:F (3.3) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922609 8y9g:A (2.67) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922610 8y9g:A (2.67) BS02 A1LYF N/A GO:0009820 ... A0A117NS29 39747040
    922611 8y9g:B (2.67) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922612 8y9g:B (2.67) BS02 A1LYF N/A GO:0009820 ... A0A117NS29 39747040
    922613 8y9g:C (2.67) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922614 8y9g:C (2.67) BS02 A1LYF N/A GO:0009820 ... A0A117NS29 39747040
    922615 8y9g:D (2.67) BS01 DST N/A GO:0009820 ... A0A117NS29 39747040
    922616 8y9g:D (2.67) BS02 A1LYF N/A GO:0009820 ... A0A117NS29 39747040
    922617 8y9j:A (4.6) BS01 rna N/A GO:0003723 ... P18272 40064872
    922618 8y9j:B (4.6) BS01 rna N/A GO:0003723 ... P18272 40064872
    922619 8y9l:A (3.0) BS01 rna N/A N/A N/A 39955288
    922620 8y9m:A (2.76) BS01 rna N/A N/A N/A 39955288
    922621 8y9m:A (2.76) BS02 dna N/A N/A N/A 39955288
    922622 8y9m:A (2.76) BS03 dna N/A N/A N/A 39955288
    922623 8y9n:A (3.0) BS01 rna N/A N/A N/A 39955288
    922624 8y9n:A (3.0) BS02 dna N/A N/A N/A 39955288
    922625 8y9n:A (3.0) BS03 dna N/A N/A N/A 39955288
    922626 8y9n:A (3.0) BS04 MG N/A N/A N/A 39955288
    922627 8y9o:A (1.9) BS01 IB0 N/A GO:0005515 ... Q9SZU7 39746912
    922628 8y9o:B (1.9) BS01 IB0 N/A GO:0005515 ... Q9SZU7 39746912
    922629 8y9o:C (1.9) BS01 IB0 N/A GO:0005515 ... Q9SZU7 39746912
    922630 8y9p:A (1.64) BS01 A3P ? N/A A0ACD6BAD5 38621346
    922631 8y9v:C (1.9) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 N/A
    922632 8y9v:D (1.9) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 N/A
    922633 8y9x:A (2.0) BS01 HEM 1.11.1.7 GO:0004601 ... P80025 N/A
    922634 8y9x:A (2.0) BS02 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    922635 8y9y:A (3.29) BS01 ADP N/A GO:0005524 ... P28366 39978345
    922636 8y9z:A (3.41) BS01 ADP N/A GO:0005524 ... P28366 39978345
    922637 8ya0:A (2.97) BS01 BEF N/A GO:0005524 ... P28366 39978345
    922638 8ya0:A (2.97) BS02 ADP N/A GO:0005524 ... P28366 39978345
    922639 8ya2:A (3.84) BS01 BEF N/A GO:0005524 ... P28366 39978345
    922640 8ya2:A (3.84) BS02 ADP N/A GO:0005524 ... P28366 39978345
    922641 8ya7:A (1.99) BS01 X6Y ? N/A A0A1B1Y779 N/A
    922642 8ya7:A (1.99) BS02 X6Y ? N/A A0A1B1Y779 N/A
    922643 8ya7:A (1.99) BS03 X2Y ? N/A A0A1B1Y779 N/A
    922644 8yaa:A (3.34) BS01 peptide N/A N/A Q8VZG8 39511417
    922645 8yaa:C (3.34) BS01 peptide N/A N/A Q94F62 39511417
    922646 8yaf:A (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922647 8yaf:D (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922648 8yaf:H (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922649 8yaf:L (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922650 8yaf:P (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922651 8yaf:T (3.28) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922652 8yag:A (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922653 8yag:A (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922654 8yag:B (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922655 8yag:B (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922656 8yag:C (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922657 8yag:C (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922658 8yag:D (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922659 8yag:D (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922660 8yag:E (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922661 8yag:E (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922662 8yag:F (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922663 8yag:F (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922664 8yag:G (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922665 8yag:G (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922666 8yag:H (2.33) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922667 8yag:H (2.33) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922668 8yaj:B (3.2) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922669 8yaj:C (3.2) BS01 PIN N/A GO:0000226 ... Q23192 39496813
    922670 8yaj:D (3.2) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922671 8yaj:E (3.2) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922672 8yaj:F (3.2) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922673 8yak:A (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922674 8yak:A (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922675 8yak:A (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922676 8yak:B (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922677 8yak:B (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922678 8yak:B (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922679 8yak:C (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922680 8yak:C (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922681 8yak:C (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922682 8yak:D (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922683 8yak:D (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922684 8yak:D (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922685 8yak:E (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922686 8yak:E (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922687 8yak:E (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922688 8yak:F (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922689 8yak:F (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922690 8yak:F (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922691 8yak:G (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922692 8yak:G (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922693 8yak:G (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922694 8yak:H (2.37) BS01 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922695 8yak:H (2.37) BS02 ZN N/A GO:0016787 ... A0A286D6Z1 39163957
    922696 8yak:H (2.37) BS03 97U N/A GO:0016787 ... A0A286D6Z1 39163957
    922697 8yal:B (3.1) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922698 8yal:C (3.1) BS01 ACO N/A GO:0000226 ... Q23192 39496813
    922699 8yal:D (3.1) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922700 8yal:E (3.1) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922701 8yal:F (3.1) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922702 8yaq:A (2.3) BS01 BGC N/A GO:0005975 ... Q93HT8 N/A
    922703 8yaq:B (2.3) BS01 BGC N/A GO:0005975 ... Q93HT8 N/A
    922704 8yaq:B (2.3) BS02 BGC N/A GO:0005975 ... Q93HT8 N/A
    922705 8yaq:B (2.3) BS03 BGC N/A GO:0005975 ... Q93HT8 N/A
    922706 8yaq:B (2.3) BS04 BGC N/A GO:0005975 ... Q93HT8 N/A
    922707 8yar:B (3.6) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922708 8yar:C (3.6) BS01 ACO N/A GO:0000226 ... Q23192 39496813
    922709 8yar:D (3.6) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922710 8yar:E (3.6) BS01 GTP N/A GO:0000226 ... P91910 39496813
    922711 8yar:F (3.6) BS01 G2P N/A GO:0000226 ... P12456 39496813
    922712 8yas:A (3.97) BS01 BEF N/A GO:0005524 ... P28366 39978345
    922713 8yas:A (3.97) BS02 ADP N/A GO:0005524 ... P28366 39978345
    922714 8yat:A (3.94) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922715 8yat:E (3.94) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922716 8yat:I (3.94) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922717 8yat:M (3.94) BS01 ZN N/A GO:0000303 ... P00441 41350409
    922718 8yay:A (1.8) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922719 8yay:A (1.8) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922720 8yay:A (1.8) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922721 8yay:B (1.8) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922722 8yay:B (1.8) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922723 8yay:B (1.8) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922724 8yaz:A (1.85) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922725 8yaz:A (1.85) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922726 8yaz:A (1.85) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922727 8yaz:B (1.85) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922728 8yaz:B (1.85) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922729 8yaz:B (1.85) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922730 8yb0:A (1.6) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922731 8yb0:A (1.6) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922732 8yb0:A (1.6) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922733 8yb0:B (1.6) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922734 8yb0:B (1.6) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922735 8yb0:B (1.6) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922736 8yb1:A (1.6) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922737 8yb1:A (1.6) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922738 8yb1:A (1.6) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922739 8yb1:B (1.6) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922740 8yb1:B (1.6) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922741 8yb1:B (1.6) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922742 8yb2:A (1.5) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922743 8yb2:A (1.5) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922744 8yb2:A (1.5) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922745 8yb2:A (1.5) BS04 OXY N/A GO:0004497 ... P14779 40075209
    922746 8yb2:B (1.5) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922747 8yb2:B (1.5) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922748 8yb2:B (1.5) BS03 SYN N/A GO:0004497 ... P14779 40075209
    922749 8yb2:B (1.5) BS04 OXY N/A GO:0004497 ... P14779 40075209
    922750 8yb3:A (1.5) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922751 8yb3:A (1.5) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922752 8yb3:A (1.5) BS03 OXY N/A GO:0004497 ... P14779 40075209
    922753 8yb3:B (1.5) BS01 HEM N/A GO:0004497 ... P14779 40075209
    922754 8yb3:B (1.5) BS02 D0L N/A GO:0004497 ... P14779 40075209
    922755 8yb3:B (1.5) BS03 OXY N/A GO:0004497 ... P14779 40075209
    922756 8yb4:A (3.1) BS01 O6E N/A GO:0000155 ... P14713 39317197
    922757 8yb4:B (3.1) BS01 O6E N/A GO:0000155 ... P14713 39317197
    922758 8yb6:A (3.06) BS01 rna N/A GO:0003676 ... A0ACD6BA35 39047725
    922759 8yb6:A (3.06) BS02 ZN N/A GO:0003676 ... A0ACD6BA35 39047725
    922760 8yb6:B (3.06) BS01 rna N/A N/A A0ACD6BA36 39047725
    922761 8yb6:D (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922762 8yb6:E (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922763 8yb6:F (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922764 8yb6:G (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922765 8yb6:H (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922766 8yb6:I (3.06) BS01 rna N/A N/A A0ACD6BA34 39047725
    922767 8yb6:J (3.06) BS01 rna N/A N/A A0ACD6BA32 39047725
    922768 8yb6:J (3.06) BS02 ZN N/A N/A A0ACD6BA32 39047725
    922769 8ybe:A (2.3) BS01 GLC ? GO:0005515 ... P0AEX9 N/A
    922770 8ybe:A (2.3) BS02 GLC ? GO:0005515 ... P0AEX9 N/A
    922771 8ybj:A (2.38) BS01 dna N/A GO:0000786 ... P68431 38972377
    922772 8ybj:A (2.38) BS02 dna N/A GO:0000786 ... P68431 38972377
    922773 8ybj:B (2.38) BS01 dna N/A GO:0000781 ... P62805 38972377
    922774 8ybj:B (2.38) BS02 dna N/A GO:0000781 ... P62805 38972377
    922775 8ybj:C (2.38) BS01 dna N/A GO:0000786 ... P04908 38972377
    922776 8ybj:C (2.38) BS02 dna N/A GO:0000786 ... P04908 38972377
    922777 8ybj:D (2.38) BS01 dna N/A GO:0000786 ... P06899 38972377
    922778 8ybj:D (2.38) BS02 dna N/A GO:0000786 ... P06899 38972377
    922779 8ybj:E (2.38) BS01 dna N/A GO:0000786 ... P68431 38972377
    922780 8ybj:E (2.38) BS02 dna N/A GO:0000786 ... P68431 38972377
    922781 8ybj:F (2.38) BS01 dna N/A GO:0000781 ... P62805 38972377
    922782 8ybj:F (2.38) BS02 dna N/A GO:0000781 ... P62805 38972377
    922783 8ybj:G (2.38) BS01 dna N/A GO:0000786 ... P04908 38972377
    922784 8ybj:G (2.38) BS02 dna N/A GO:0000786 ... P04908 38972377
    922785 8ybj:H (2.38) BS01 dna N/A GO:0000786 ... P06899 38972377
    922786 8ybj:H (2.38) BS02 dna N/A GO:0000786 ... P06899 38972377
    922787 8ybk:A (2.69) BS01 dna N/A GO:0000786 ... P68431 38972377
    922788 8ybk:A (2.69) BS02 dna N/A GO:0000786 ... P68431 38972377
    922789 8ybk:B (2.69) BS01 dna N/A GO:0000781 ... P62805 38972377
    922790 8ybk:B (2.69) BS02 dna N/A GO:0000781 ... P62805 38972377
    922791 8ybk:C (2.69) BS01 dna N/A GO:0000786 ... P04908 38972377
    922792 8ybk:C (2.69) BS02 dna N/A GO:0000786 ... P04908 38972377
    922793 8ybk:D (2.69) BS01 dna N/A GO:0000786 ... P06899 38972377
    922794 8ybk:E (2.69) BS01 dna N/A GO:0000786 ... P68431 38972377
    922795 8ybk:E (2.69) BS02 dna N/A GO:0000786 ... P68431 38972377
    922796 8ybk:F (2.69) BS01 dna N/A GO:0000781 ... P62805 38972377
    922797 8ybk:F (2.69) BS02 dna N/A GO:0000781 ... P62805 38972377
    922798 8ybk:G (2.69) BS01 dna N/A GO:0000786 ... P04908 38972377
    922799 8ybk:G (2.69) BS02 dna N/A GO:0000786 ... P04908 38972377
    922800 8ybk:H (2.69) BS01 dna N/A GO:0000786 ... P06899 38972377

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).