SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4606 4607 4608 4609 4610 4611 4612 4613 4614 4615 4616 4617 4618 4619 4620 4621 4622 4623 4624 4625 4626 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    923001 9bln:R (3.9) BS01 rna N/A GO:0000462 ... P62241 39117603
    923002 9bln:S (3.9) BS01 rna N/A GO:0000082 ... P62753 39117603
    923003 9bln:T (3.9) BS01 rna N/A GO:0002181 ... P62847 39117603
    923004 9bln:V (3.9) BS01 rna N/A GO:0000028 ... P46782 39117603
    923005 9bln:W (3.9) BS01 rna N/A GO:0003723 ... P41567 39117603
    923006 9bln:Y (3.9) BS01 rna N/A GO:0000462 ... P62249 39117603
    923007 9bln:Z (3.9) BS01 rna N/A GO:0000977 ... P23396 39117603
    923008 9bln:a (3.9) BS01 rna N/A GO:0002181 ... P46783 39117603
    923009 9bln:b (3.9) BS01 rna N/A GO:0000028 ... P62841 39117603
    923010 9bln:c (3.9) BS01 rna N/A GO:0001891 ... P63244 39117603
    923011 9bln:d (3.9) BS01 rna N/A GO:0000028 ... P39019 39117603
    923012 9bln:e (3.9) BS01 rna N/A GO:0002181 ... P62851 39117603
    923013 9bln:f (3.9) BS01 rna N/A GO:0002181 ... P62269 39117603
    923014 9bln:h (3.9) BS01 rna N/A GO:0002181 ... P60866 39117603
    923015 9bln:i (3.9) BS01 rna N/A GO:0002181 ... P62273 39117603
    923016 9bln:i (3.9) BS02 ZN N/A GO:0002181 ... P62273 39117603
    923017 9bln:k (3.9) BS01 rna N/A GO:0002181 ... P62979 39117603
    923018 9bln:k (3.9) BS02 ZN N/A GO:0002181 ... P62979 39117603
    923019 9bln:m (3.9) BS01 rna N/A GO:0002181 ... P25398 39117603
    923020 9bln:n (3.9) BS01 rna N/A GO:0000028 ... P62857 39117603
    923021 9bln:p (3.9) BS01 rna N/A GO:0003723 ... Q53EL6 39117603
    923022 9bln:x (3.9) BS01 rna N/A GO:0001732 ... O15371 39117603
    923023 9bls:A (2.96) BS01 peptide N/A N/A P38646 39737924
    923024 9blt:A (3.38) BS01 peptide N/A N/A P38646 39737924
    923025 9blv:A (1.78) BS01 BZI N/A N/A P28796 39114092
    923026 9blv:A (1.78) BS02 0JO N/A N/A P28796 39114092
    923027 9blv:B (1.78) BS01 PLT N/A N/A P28796 39114092
    923028 9blv:C (1.78) BS01 A1A2Z N/A N/A P28796 39114092
    923029 9blv:D (1.78) BS01 BZI N/A N/A P28796 39114092
    923030 9blv:D (1.78) BS02 0JO N/A N/A P28796 39114092
    923031 9blx:A (1.96) BS01 peptide N/A N/A N/A 39792559
    923032 9blx:B (1.96) BS01 peptide N/A N/A N/A 39792559
    923033 9blx:H (1.96) BS01 peptide N/A N/A N/A 39792559
    923034 9blx:L (1.96) BS01 peptide N/A N/A N/A 39792559
    923035 9bmk:A (2.21) BS01 BGC N/A GO:0005576 ... D1PD14 39122003
    923036 9bmk:A (2.21) BS02 BGC N/A GO:0005576 ... D1PD14 39122003
    923037 9bmk:A (2.21) BS03 BGC N/A GO:0005576 ... D1PD14 39122003
    923038 9bmk:A (2.21) BS04 BGC N/A GO:0005576 ... D1PD14 39122003
    923039 9bmk:A (2.21) BS05 BGC N/A GO:0005576 ... D1PD14 39122003
    923040 9bmk:B (2.21) BS01 BGC N/A GO:0005576 ... D1PD14 39122003
    923041 9bmk:B (2.21) BS02 BGC N/A GO:0005576 ... D1PD14 39122003
    923042 9bmk:B (2.21) BS03 BGC N/A GO:0005576 ... D1PD14 39122003
    923043 9bmk:B (2.21) BS04 BGC N/A GO:0005576 ... D1PD14 39122003
    923044 9bmk:B (2.21) BS05 BGC N/A GO:0005576 ... D1PD14 39122003
    923045 9bmk:B (2.21) BS06 BGC N/A GO:0005576 ... D1PD14 39122003
    923046 9bn8:A (1.35) BS01 UMA 6.3.2.9 GO:0005515 ... P14900 N/A
    923047 9bn8:A (1.35) BS02 A1AQS 6.3.2.9 GO:0005515 ... P14900 N/A
    923048 9bn9:A (1.23) BS01 UMA 6.3.2.9 GO:0005515 ... P14900 N/A
    923049 9bn9:A (1.23) BS02 A1AQS 6.3.2.9 GO:0005515 ... P14900 N/A
    923050 9bn9:A (1.23) BS03 A1AQS 6.3.2.9 GO:0005515 ... P14900 N/A
    923051 9bnj:A (1.51) BS01 BZI 4.1.99.1 GO:0006520 ... P28796 39114092
    923052 9bnj:A (1.51) BS02 0JO 4.1.99.1 GO:0006520 ... P28796 39114092
    923053 9bnj:A (1.51) BS03 BZI 4.1.99.1 GO:0006520 ... P28796 39114092
    923054 9bnj:B (1.51) BS01 BZI 4.1.99.1 GO:0006520 ... P28796 39114092
    923055 9bnj:B (1.51) BS02 0JO 4.1.99.1 GO:0006520 ... P28796 39114092
    923056 9bnj:C (1.51) BS01 BZI 4.1.99.1 GO:0006520 ... P28796 39114092
    923057 9bnj:C (1.51) BS02 0JO 4.1.99.1 GO:0006520 ... P28796 39114092
    923058 9bnj:D (1.51) BS01 BZI 4.1.99.1 GO:0006520 ... P28796 39114092
    923059 9bnj:D (1.51) BS02 0JO 4.1.99.1 GO:0006520 ... P28796 39114092
    923060 9bnq:A (1.09) BS01 A1AQU N/A GO:0001516 ... P14174 38977403
    923061 9bnq:B (1.09) BS01 A1AQU N/A GO:0001516 ... P14174 38977403
    923062 9bnq:C (1.09) BS01 A1AQU N/A GO:0001516 ... P14174 38977403
    923063 9bnr:A (1.53) BS01 A1AQT N/A GO:0001516 ... P14174 38977403
    923064 9bnr:B (1.53) BS01 A1AQT N/A GO:0001516 ... P14174 38977403
    923065 9bnr:C (1.53) BS01 A1AQT N/A GO:0001516 ... P14174 38977403
    923066 9bns:A (3.0) BS01 peptide N/A N/A N/A 39792559
    923067 9bns:H (3.0) BS01 peptide N/A N/A N/A 39792559
    923068 9bns:H (3.0) BS02 peptide N/A N/A N/A 39792559
    923069 9bo0:A (2.16) BS01 XEK N/A N/A P0DTC1 N/A
    923070 9bo1:A (1.96) BS01 XEK N/A N/A P0DTD1 N/A
    923071 9bo2:A (1.91) BS01 XEK N/A N/A P0DTD1 N/A
    923072 9bo3:A (2.78) BS01 XEK N/A N/A P0DTD1 N/A
    923073 9bo4:A (2.28) BS01 4WI N/A N/A P0DTC1 N/A
    923074 9bo4:B (2.28) BS01 4WI N/A N/A P0DTC1 N/A
    923075 9bo5:A (1.84) BS01 4WI N/A N/A P0DTD1 N/A
    923076 9bo5:B (1.84) BS01 4WI N/A N/A P0DTD1 N/A
    923077 9bo6:A (1.61) BS01 4WI N/A N/A P0DTD1 N/A
    923078 9bo7:A (1.54) BS01 4WI N/A N/A P0DTD1 N/A
    923079 9bo8:A (1.49) BS01 UED N/A N/A P0DTC1 N/A
    923080 9bo9:A (1.98) BS01 UED N/A N/A P0DTD1 N/A
    923081 9bo9:B (1.98) BS01 UED N/A N/A P0DTD1 N/A
    923082 9boa:A (1.7) BS01 UED N/A N/A P0DTD1 N/A
    923083 9bob:A (1.87) BS01 UED N/A N/A P0DTD1 N/A
    923084 9boc:A (1.68) BS01 UED N/A N/A P0DTD1 N/A
    923085 9bod:A (1.91) BS01 UED N/A N/A P0DTD1 N/A
    923086 9boe:A (2.02) BS01 UED N/A N/A P0DTD1 N/A
    923087 9boe:B (2.02) BS01 UED N/A N/A P0DTD1 N/A
    923088 9boh:A (2.0) BS01 A1AQW N/A GO:0004372 ... Q5SI56 39148791
    923089 9boh:A (2.0) BS02 FFO N/A GO:0004372 ... Q5SI56 39148791
    923090 9boh:B (2.0) BS01 A1AQW N/A GO:0004372 ... Q5SI56 39148791
    923091 9boh:B (2.0) BS02 FFO N/A GO:0004372 ... Q5SI56 39148791
    923092 9boi:A (3.22) BS01 42H N/A N/A P0AEX9
    P42212
    Q9H2V7
    39739806
    923093 9bol:C (1.99) BS01 A1ARP ? N/A P40337 38809766
    923094 9bol:F (1.99) BS01 A1ARP ? N/A P40337 38809766
    923095 9boo:A (1.5) BS01 YDL N/A GO:0008233 ... K9N638 39211604
    923096 9boq:A (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923097 9boq:A (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923098 9boq:A (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923099 9boq:B (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923100 9boq:B (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923101 9boq:B (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923102 9boq:C (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923103 9boq:C (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923104 9boq:C (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923105 9boq:D (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923106 9boq:D (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923107 9boq:D (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923108 9boq:E (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923109 9boq:E (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923110 9boq:E (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923111 9boq:F (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923112 9boq:F (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923113 9boq:F (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923114 9boq:G (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923115 9boq:G (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923116 9boq:G (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923117 9boq:H (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923118 9boq:H (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923119 9boq:H (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923120 9boq:I (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923121 9boq:I (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923122 9boq:I (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923123 9boq:J (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923124 9boq:J (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923125 9boq:J (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923126 9boq:K (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923127 9boq:K (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923128 9boq:K (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923129 9boq:L (3.33) BS01 ADP N/A GO:0000502 ... P55072 39122922
    923130 9boq:L (3.33) BS02 ADP N/A GO:0000502 ... P55072 39122922
    923131 9boq:L (3.33) BS03 XKM N/A GO:0000502 ... P55072 39122922
    923132 9bow:A (1.8) BS01 SER N/A GO:0004372 ... Q5SI56 39148791
    923133 9bow:A (1.8) BS02 KOU N/A GO:0004372 ... Q5SI56 39148791
    923134 9bow:A (1.8) BS03 FFO N/A GO:0004372 ... Q5SI56 39148791
    923135 9bow:B (1.8) BS01 SER N/A GO:0004372 ... Q5SI56 39148791
    923136 9bow:B (1.8) BS02 KOU N/A GO:0004372 ... Q5SI56 39148791
    923137 9bow:B (1.8) BS03 FFO N/A GO:0004372 ... Q5SI56 39148791
    923138 9box:A (2.1) BS01 A1AQW N/A GO:0002082 ... P34897 39148791
    923139 9box:A (2.1) BS02 FFO N/A GO:0002082 ... P34897 39148791
    923140 9box:A (2.1) BS03 A1AQW N/A GO:0002082 ... P34897 39148791
    923141 9box:A (2.1) BS04 FFO N/A GO:0002082 ... P34897 39148791
    923142 9box:B (2.1) BS01 A1AQW N/A GO:0002082 ... P34897 39148791
    923143 9box:B (2.1) BS02 FFO N/A GO:0002082 ... P34897 39148791
    923144 9box:B (2.1) BS03 A1AQW N/A GO:0002082 ... P34897 39148791
    923145 9box:B (2.1) BS04 FFO N/A GO:0002082 ... P34897 39148791
    923146 9box:C (2.1) BS01 A1AQW N/A GO:0002082 ... P34897 39148791
    923147 9box:C (2.1) BS02 FFO N/A GO:0002082 ... P34897 39148791
    923148 9box:C (2.1) BS03 A1AQW N/A GO:0002082 ... P34897 39148791
    923149 9box:C (2.1) BS04 FFO N/A GO:0002082 ... P34897 39148791
    923150 9box:D (2.1) BS01 A1AQW N/A GO:0002082 ... P34897 39148791
    923151 9box:D (2.1) BS02 FFO N/A GO:0002082 ... P34897 39148791
    923152 9box:D (2.1) BS03 A1AQW N/A GO:0002082 ... P34897 39148791
    923153 9box:D (2.1) BS04 FFO N/A GO:0002082 ... P34897 39148791
    923154 9bp1:A (3.58) BS01 peptide N/A N/A N/A 39792559
    923155 9bp1:B (3.58) BS01 peptide N/A N/A N/A 39792559
    923156 9bp1:H (3.58) BS01 peptide N/A N/A N/A 39792559
    923157 9bp6:A (3.1) BS01 GTP 3.6.5.- GO:0000226 ... P68363 N/A
    923158 9bp6:B (3.1) BS01 G2P ? GO:0000226 ... P07437 N/A
    923159 9bp6:I (3.1) BS01 GTP 3.6.5.- GO:0000226 ... P68363 N/A
    923160 9bp6:Q (3.1) BS01 G2P ? GO:0000226 ... P07437 N/A
    923161 9bp9:A (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923162 9bp9:C (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923163 9bpa:A (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923164 9bpa:C (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923165 9bpa:E (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923166 9bpa:G (3.21) BS01 WCN N/A GO:0003676 ... O75417 39143110
    923167 9bpe:A (2.0) BS01 FFO N/A GO:0004372 ... Q5SI56 39148791
    923168 9bpe:B (2.0) BS01 FFO N/A GO:0004372 ... Q5SI56 39148791
    923169 9bpf:A (2.0) BS01 YDL N/A GO:0008233 ... P0DTD1 39211604
    923170 9bpf:B (2.0) BS01 YDL N/A GO:0008233 ... P0DTD1 39211604
    923171 9bpx:A (2.2) BS01 HIS N/A N/A P03372 39825366
    923172 9bpx:A (2.2) BS02 TZI N/A N/A P03372 39825366
    923173 9bpx:B (2.2) BS01 A1BV9 N/A N/A P03372 39825366
    923174 9bpy:A (2.8) BS01 DQV N/A N/A P09874 39536748
    923175 9bpy:A (2.8) BS02 CNA N/A N/A P09874 39536748
    923176 9bpy:B (2.8) BS01 CNA N/A N/A P09874 39536748
    923177 9bpy:B (2.8) BS02 DQV N/A N/A P09874 39536748
    923178 9bpy:C (2.8) BS01 DQV N/A N/A P09874 39536748
    923179 9bpy:D (2.8) BS01 DQV N/A N/A P09874 39536748
    923180 9bq0:A (2.9) BS01 ATP N/A GO:0006631 ... A0A7G3URI3 39333393
    923181 9bq0:B (2.9) BS01 ATP N/A GO:0006631 ... A0A7G3URI3 39333393
    923182 9bq0:B (2.9) BS02 MG N/A GO:0006631 ... A0A7G3URI3 39333393
    923183 9bq0:C (2.9) BS01 ATP N/A GO:0006631 ... A0A7G3URI3 39333393
    923184 9bq0:D (2.9) BS01 ATP N/A GO:0006631 ... A0A7G3URI3 39333393
    923185 9bqe:A (1.98) BS01 TV3 N/A N/A P03372 39825366
    923186 9bqe:B (1.98) BS01 TV3 N/A N/A P03372 39825366
    923187 9bqi:A (2.55) BS01 P6E N/A N/A Q99571 39823330
    923188 9bqi:B (2.55) BS01 P6E N/A N/A Q99571 39823330
    923189 9bqi:C (2.55) BS01 P6E N/A N/A Q99571 39823330
    923190 9bqj:D (3.3) BS01 A1AQ2 N/A GO:0004930 ... P42866 39220695
    923191 9br2:A (3.41) BS01 ATP N/A GO:0005515 ... Q92887 39779684
    923192 9br2:A (3.41) BS02 ATP N/A GO:0005515 ... Q92887 39779684
    923193 9br2:A (3.41) BS03 MG N/A GO:0005515 ... Q92887 39779684
    923194 9br2:A (3.41) BS04 CLR N/A GO:0005515 ... Q92887 39779684
    923195 9br2:A (3.41) BS05 CLR N/A GO:0005515 ... Q92887 39779684
    923196 9br4:A (1.7) BS01 A1ARZ N/A N/A P04637 39811143
    923197 9br4:A (1.7) BS02 ZN N/A N/A P04637 39811143
    923198 9br4:B (1.7) BS01 A1ARZ N/A N/A P04637 39811143
    923199 9br4:B (1.7) BS02 ZN N/A N/A P04637 39811143
    923200 9br7:A (2.08) BS01 A1ATL N/A GO:0003824 ... Q9HAC7 38915184

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).