SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    923201 9br7:C (2.08) BS01 A1ATL N/A GO:0003824 ... Q9HAC7 38915184
    923202 9br7:D (2.08) BS01 A1ATL N/A GO:0003824 ... Q9HAC7 38915184
    923203 9br7:D (2.08) BS02 A1ATL N/A GO:0003824 ... Q9HAC7 38915184
    923204 9brd:A (3.5) BS01 ADP N/A GO:0000221 ... D4A133 38900912
    923205 9brd:a (3.5) BS01 BMA N/A GO:0000220 ... P25286 38900912
    923206 9brd:a (3.5) BS02 MAN N/A GO:0000220 ... P25286 38900912
    923207 9brd:a (3.5) BS03 GLC N/A GO:0000220 ... P25286 38900912
    923208 9brd:a (3.5) BS04 GLC N/A GO:0000220 ... P25286 38900912
    923209 9brd:a (3.5) BS05 WJP N/A GO:0000220 ... P25286 38900912
    923210 9brd:a (3.5) BS06 LP3 N/A GO:0000220 ... P25286 38900912
    923211 9brd:f (3.5) BS01 LP3 N/A GO:0004521 ... A0A8J8YMT9 38900912
    923212 9brd:h (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923213 9brd:i (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923214 9brd:i (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923215 9brd:i (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    923216 9brd:j (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923217 9brd:j (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923218 9brd:k (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923219 9brd:k (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923220 9brd:l (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923221 9brd:l (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923222 9brd:l (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    923223 9brd:m (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923224 9brd:m (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923225 9brd:m (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    923226 9brd:n (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923227 9brd:n (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923228 9brd:n (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    923229 9brd:n (3.5) BS04 CLR N/A GO:0000220 ... P63081 38900912
    923230 9brd:o (3.5) BS01 CLR N/A GO:0000220 ... P63081 38900912
    923231 9brd:o (3.5) BS02 CLR N/A GO:0000220 ... P63081 38900912
    923232 9brd:o (3.5) BS03 CLR N/A GO:0000220 ... P63081 38900912
    923233 9brd:o (3.5) BS04 CLR N/A GO:0000220 ... P63081 38900912
    923234 9bre:A (2.8) BS01 W3F N/A N/A P34947 39549325
    923235 9brg:A (2.7) BS01 A1AQ6 N/A N/A P34947 39549325
    923236 9brh:A (3.69) BS01 A1AQ7 N/A N/A P34947 39549325
    923237 9bri:A (2.9) BS01 A1AQ8 N/A N/A P34947 39549325
    923238 9brj:A (2.8) BS01 A1AQ9 N/A N/A P34947 39549325
    923239 9brv:A (2.6) BS01 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    923240 9brv:A (2.6) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923241 9brv:A (2.6) BS03 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    923242 9brv:B (2.6) BS01 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    923243 9brv:B (2.6) BS02 A1ASK N/A GO:0006508 ... P0DTD1 39140055
    923244 9brv:B (2.6) BS03 ZN N/A GO:0006508 ... P0DTD1 39140055
    923245 9brw:A (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    923246 9brw:A (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923247 9brw:B (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    923248 9brw:B (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923249 9brw:C (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    923250 9brw:C (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923251 9brw:D (2.5) BS01 A1ARL N/A GO:0006508 ... P0DTD1 39140055
    923252 9brw:D (2.5) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923253 9brx:AA (1.8) BS01 A1ASL N/A GO:0006508 ... P0DTD1 39140055
    923254 9brx:AA (1.8) BS02 ZN N/A GO:0006508 ... P0DTD1 39140055
    923255 9bry:c (3.6) BS01 BMA N/A N/A Q9R1Q9 38838737
    923256 9bs0:C (3.3) BS01 rna N/A N/A P42919 39658043
    923257 9bs0:D (3.3) BS01 rna N/A N/A P42920 39658043
    923258 9bs0:E (3.3) BS01 rna N/A N/A P42921 39658043
    923259 9bs0:F (3.3) BS01 rna N/A N/A P46898 39658043
    923260 9bs0:G (3.3) BS01 rna N/A N/A P70974 39658043
    923261 9bs0:H (3.3) BS01 rna N/A N/A P12875 39658043
    923262 9bs0:I (3.3) BS01 rna N/A N/A P19946 39658043
    923263 9bs0:J (3.3) BS01 rna N/A N/A P20277 39658043
    923264 9bs0:K (3.3) BS01 rna N/A N/A O31742 39658043
    923265 9bs0:L (3.3) BS01 rna N/A N/A P55873 39658043
    923266 9bs0:M (3.3) BS01 rna N/A N/A P26908 39658043
    923267 9bs0:N (3.3) BS01 rna N/A N/A P42060 39658043
    923268 9bs0:O (3.3) BS01 rna N/A N/A P42924 39658043
    923269 9bs0:P (3.3) BS01 rna N/A N/A P0CI78 39658043
    923270 9bs0:Q (3.3) BS01 rna N/A N/A P05657 39658043
    923271 9bs0:R (3.3) BS01 rna N/A N/A P12873 39658043
    923272 9bs0:S (3.3) BS01 rna N/A N/A P19947 39658043
    923273 9bs0:T (3.3) BS01 rna N/A N/A O34687 39658043
    923274 9bs0:U (3.3) BS01 rna N/A N/A P05647 39658043
    923275 9bs0:V (3.3) BS01 rna N/A N/A P46899 39658043
    923276 9bs0:V (3.3) BS02 rna N/A N/A P46899 39658043
    923277 9bs0:W (3.3) BS01 rna N/A N/A P50743 39658043
    923278 9bs0:W (3.3) BS02 GNP N/A N/A P50743 39658043
    923279 9bs0:W (3.3) BS03 GNP N/A N/A P50743 39658043
    923280 9bs0:Y (3.3) BS01 rna N/A N/A Q06797 39658043
    923281 9bs0:Z (3.3) BS01 rna N/A N/A P56849 39658043
    923282 9bs2:A (1.51) BS01 dna N/A GO:0000701 ... P83847 N/A
    923283 9bs2:A (1.51) BS02 dna N/A GO:0000701 ... P83847 N/A
    923284 9bs2:A (1.51) BS03 SF4 N/A GO:0000701 ... P83847 N/A
    923285 9bs2:A (1.51) BS04 CA N/A GO:0000701 ... P83847 N/A
    923286 9bs2:A (1.51) BS05 CA N/A GO:0000701 ... P83847 N/A
    923287 9bs2:A (1.51) BS06 CA N/A GO:0000701 ... P83847 N/A
    923288 9bs3:A (2.69) BS01 dna N/A GO:0003677 ... P18858 39159820
    923289 9bs3:A (2.69) BS02 dna N/A GO:0003677 ... P18858 39159820
    923290 9bs3:A (2.69) BS03 dna N/A GO:0003677 ... P18858 39159820
    923291 9bs3:A (2.69) BS04 AMP N/A GO:0003677 ... P18858 39159820
    923292 9bs3:E (2.69) BS01 dna N/A GO:0003677 ... P18858 39159820
    923293 9bs3:E (2.69) BS02 dna N/A GO:0003677 ... P18858 39159820
    923294 9bs3:E (2.69) BS03 dna N/A GO:0003677 ... P18858 39159820
    923295 9bs3:E (2.69) BS04 AMP N/A GO:0003677 ... P18858 39159820
    923296 9bs4:A (2.4) BS01 dna N/A GO:0003677 ... P18858 39159820
    923297 9bs4:A (2.4) BS02 dna N/A GO:0003677 ... P18858 39159820
    923298 9bs4:A (2.4) BS03 dna N/A GO:0003677 ... P18858 39159820
    923299 9bs4:A (2.4) BS04 AMP N/A GO:0003677 ... P18858 39159820
    923300 9bs4:E (2.4) BS01 dna N/A GO:0003677 ... P18858 39159820
    923301 9bs4:E (2.4) BS02 dna N/A GO:0003677 ... P18858 39159820
    923302 9bs4:E (2.4) BS03 dna N/A GO:0003677 ... P18858 39159820
    923303 9bs4:E (2.4) BS04 AMP N/A GO:0003677 ... P18858 39159820
    923304 9bs5:A (1.46) BS01 GLC N/A N/A A0AAN3A6N4 N/A
    923305 9bs5:A (1.46) BS02 AC1 N/A N/A A0AAN3A6N4 N/A
    923306 9bs5:A (1.46) BS03 CA N/A N/A A0AAN3A6N4 N/A
    923307 9bs5:B (1.46) BS01 GLC N/A N/A A0AAN3A6N4 N/A
    923308 9bs5:B (1.46) BS02 AC1 N/A N/A A0AAN3A6N4 N/A
    923309 9bs5:B (1.46) BS03 CA N/A N/A A0AAN3A6N4 N/A
    923310 9bsl:C (3.1) BS01 rna N/A N/A P42919 39658043
    923311 9bsl:D (3.1) BS01 rna N/A N/A P42920 39658043
    923312 9bsl:E (3.1) BS01 rna N/A N/A P42921 39658043
    923313 9bsl:F (3.1) BS01 rna N/A N/A P46898 39658043
    923314 9bsl:G (3.1) BS01 rna N/A N/A P70974 39658043
    923315 9bsl:H (3.1) BS01 rna N/A N/A P12875 39658043
    923316 9bsl:I (3.1) BS01 rna N/A N/A P19946 39658043
    923317 9bsl:J (3.1) BS01 rna N/A N/A P20277 39658043
    923318 9bsl:K (3.1) BS01 rna N/A N/A O31742 39658043
    923319 9bsl:L (3.1) BS01 rna N/A N/A P55873 39658043
    923320 9bsl:M (3.1) BS01 rna N/A N/A P26908 39658043
    923321 9bsl:N (3.1) BS01 rna N/A N/A P42060 39658043
    923322 9bsl:O (3.1) BS01 rna N/A N/A P42924 39658043
    923323 9bsl:P (3.1) BS01 rna N/A N/A P0CI78 39658043
    923324 9bsl:R (3.1) BS01 rna N/A N/A P12873 39658043
    923325 9bsl:S (3.1) BS01 rna N/A N/A P19947 39658043
    923326 9bsl:T (3.1) BS01 rna N/A N/A O34687 39658043
    923327 9bsl:U (3.1) BS01 rna N/A N/A P05647 39658043
    923328 9bsl:V (3.1) BS01 rna N/A N/A O31743 39658043
    923329 9bsl:V (3.1) BS02 GNP N/A N/A O31743 39658043
    923330 9bsl:W (3.1) BS01 rna N/A N/A P50743 39658043
    923331 9bsl:W (3.1) BS02 GNP N/A N/A P50743 39658043
    923332 9bsl:W (3.1) BS03 GNP N/A N/A P50743 39658043
    923333 9bsl:Y (3.1) BS01 rna N/A N/A Q06797 39658043
    923334 9bss:C (3.1) BS01 rna N/A N/A P42919 39658043
    923335 9bss:D (3.1) BS01 rna N/A N/A P42920 39658043
    923336 9bss:E (3.1) BS01 rna N/A N/A P42921 39658043
    923337 9bss:F (3.1) BS01 rna N/A N/A P46898 39658043
    923338 9bss:G (3.1) BS01 rna N/A N/A P70974 39658043
    923339 9bss:H (3.1) BS01 rna N/A N/A P12875 39658043
    923340 9bss:I (3.1) BS01 rna N/A N/A P19946 39658043
    923341 9bss:J (3.1) BS01 rna N/A N/A P20277 39658043
    923342 9bss:K (3.1) BS01 rna N/A N/A O31742 39658043
    923343 9bss:L (3.1) BS01 rna N/A N/A P55873 39658043
    923344 9bss:M (3.1) BS01 rna N/A N/A P26908 39658043
    923345 9bss:N (3.1) BS01 rna N/A N/A P42060 39658043
    923346 9bss:O (3.1) BS01 rna N/A N/A P42924 39658043
    923347 9bss:P (3.1) BS01 rna N/A N/A P0CI78 39658043
    923348 9bss:Q (3.1) BS01 rna N/A N/A P05657 39658043
    923349 9bss:R (3.1) BS01 rna N/A N/A P12873 39658043
    923350 9bss:S (3.1) BS01 rna N/A N/A P19947 39658043
    923351 9bss:T (3.1) BS01 rna N/A N/A O34687 39658043
    923352 9bss:U (3.1) BS01 rna N/A N/A P05647 39658043
    923353 9bss:V (3.1) BS01 rna N/A N/A O31743 39658043
    923354 9bss:V (3.1) BS02 GNP N/A N/A O31743 39658043
    923355 9bss:W (3.1) BS01 rna N/A N/A P50743 39658043
    923356 9bss:W (3.1) BS02 GNP N/A N/A P50743 39658043
    923357 9bss:W (3.1) BS03 GNP N/A N/A P50743 39658043
    923358 9bss:Y (3.1) BS01 rna N/A N/A Q06797 39658043
    923359 9bsv:D (3.1) BS01 MAN N/A N/A N/A 39715280
    923360 9bsv:F (3.1) BS01 MAN N/A N/A N/A 39715280
    923361 9bt4:A (1.92) BS01 TPP N/A GO:0006082 ... Q8TUN4 39265575
    923362 9bt4:B (1.92) BS01 TPP N/A GO:0006082 ... Q8TUN4 39265575
    923363 9bt4:C (1.92) BS01 SF4 N/A GO:0006082 ... Q8TUN5 39265575
    923364 9bt4:C (1.92) BS02 TPP N/A GO:0006082 ... Q8TUN5 39265575
    923365 9bt4:C (1.92) BS03 MG N/A GO:0006082 ... Q8TUN5 39265575
    923366 9bt4:D (1.92) BS01 SF4 N/A GO:0006082 ... Q8TUN5 39265575
    923367 9bt4:D (1.92) BS02 TPP N/A GO:0006082 ... Q8TUN5 39265575
    923368 9bt4:D (1.92) BS03 MG N/A GO:0006082 ... Q8TUN5 39265575
    923369 9bt4:G (1.92) BS01 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    923370 9bt4:G (1.92) BS02 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    923371 9bt4:H (1.92) BS01 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    923372 9bt4:H (1.92) BS02 SF4 N/A GO:0016491 ... Q8TUN3 39265575
    923373 9bt8:A (3.34) BS01 peptide N/A N/A N/A 39131402
    923374 9bt8:B (3.34) BS01 peptide N/A GO:0000785 ... P29066 39131402
    923375 9bts:A (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923376 9bts:B (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923377 9bts:C (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923378 9bts:D (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923379 9bts:E (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923380 9bts:F (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923381 9bts:G (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923382 9bts:H (1.85) BS01 HEM N/A GO:0004322 ... A0A1E3M9R5 39107474
    923383 9bts:a (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923384 9bts:b (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923385 9bts:c (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923386 9bts:d (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923387 9bts:e (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923388 9bts:f (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923389 9bts:g (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923390 9bts:h (1.85) BS01 HEM N/A GO:0004322 ... T2HRY3 39107474
    923391 9btx:A (2.05) BS01 H6N N/A N/A Q95460 39820322
    923392 9btx:C (2.05) BS01 H6N N/A N/A Q95460 39820322
    923393 9bty:A (2.85) BS01 XIK N/A N/A Q95460 39820322
    923394 9bty:C (2.85) BS01 XIK N/A N/A Q95460 39820322
    923395 9btz:A (3.0) BS01 XIE N/A N/A Q95460 39820322
    923396 9btz:C (3.0) BS01 XIE N/A N/A Q95460 39820322
    923397 9bu0:A (2.89) BS01 NK N/A N/A Q95460 39820322
    923398 9bu0:C (2.89) BS01 NK N/A N/A Q95460 39820322
    923399 9bu1:A (1.75) BS01 A1ASN N/A N/A P03372 39825366
    923400 9bu1:B (1.75) BS01 A1ASN N/A N/A P03372 39825366

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).