SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    924201 9c6l:A (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924202 9c6l:B (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924203 9c6l:C (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924204 9c6l:D (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924205 9c6l:E (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924206 9c6l:F (2.7) BS01 AMP N/A GO:0005524 ... A0A5K0UB63 N/A
    924207 9c6m:A (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924208 9c6m:B (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924209 9c6m:C (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924210 9c6m:D (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924211 9c6m:E (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924212 9c6m:F (2.6) BS01 ATP N/A GO:0005524 ... A0A5K0UB63 N/A
    924213 9c6n:J (3.29) BS01 ATP N/A GO:0000776 ... P60709 39088653
    924214 9c6n:L (3.29) BS01 ATP N/A GO:0000723 ... O96019 39088653
    924215 9c6p:A (1.663) BS01 A1AUT N/A GO:0008800 ... P00811 39753705
    924216 9c6p:B (1.663) BS01 A1AUT N/A GO:0008800 ... P00811 39753705
    924217 9c6q:C (3.18) BS01 dna N/A N/A B9TSM3 39173632
    924218 9c6r:A (3.2) BS01 GTP N/A N/A P02552 39725029
    924219 9c6r:A (3.2) BS02 YGY N/A N/A P02552 39725029
    924220 9c6r:B (3.2) BS01 YGY N/A N/A P09207 39725029
    924221 9c6r:B (3.2) BS02 GDP N/A N/A P09207 39725029
    924222 9c6r:F (3.2) BS01 GTP N/A N/A P02552 39725029
    924223 9c6r:F (3.2) BS02 YGY N/A N/A P02552 39725029
    924224 9c6r:G (3.2) BS01 YGY N/A N/A P09207 39725029
    924225 9c6r:G (3.2) BS02 GDP N/A N/A P09207 39725029
    924226 9c6r:K (3.2) BS01 GTP N/A N/A P02552 39725029
    924227 9c6r:K (3.2) BS02 YGY N/A N/A P02552 39725029
    924228 9c6r:L (3.2) BS01 YGY N/A N/A P09207 39725029
    924229 9c6r:L (3.2) BS02 GDP N/A N/A P09207 39725029
    924230 9c6r:P (3.2) BS01 YGY N/A N/A P02552 39725029
    924231 9c6r:P (3.2) BS02 GTP N/A N/A P02552 39725029
    924232 9c6r:Q (3.2) BS01 YGY N/A N/A P09207 39725029
    924233 9c6r:Q (3.2) BS02 GDP N/A N/A P09207 39725029
    924234 9c6r:U (3.2) BS01 GTP N/A N/A P02552 39725029
    924235 9c6r:U (3.2) BS02 YGY N/A N/A P02552 39725029
    924236 9c6r:V (3.2) BS01 YGY N/A N/A P09207 39725029
    924237 9c6r:V (3.2) BS02 GDP N/A N/A P09207 39725029
    924238 9c6r:Z (3.2) BS01 GTP N/A N/A P02552 39725029
    924239 9c6r:Z (3.2) BS02 YGY N/A N/A P02552 39725029
    924240 9c6r:a (3.2) BS01 YGY N/A N/A P09207 39725029
    924241 9c6r:a (3.2) BS02 GDP N/A N/A P09207 39725029
    924242 9c6r:e (3.2) BS01 GTP N/A N/A P02552 39725029
    924243 9c6r:e (3.2) BS02 YGY N/A N/A P02552 39725029
    924244 9c6r:f (3.2) BS01 YGY N/A N/A P09207 39725029
    924245 9c6r:f (3.2) BS02 GDP N/A N/A P09207 39725029
    924246 9c6r:j (3.2) BS01 GTP N/A N/A P02552 39725029
    924247 9c6r:j (3.2) BS02 YGY N/A N/A P02552 39725029
    924248 9c6r:k (3.2) BS01 YGY N/A N/A P09207 39725029
    924249 9c6r:k (3.2) BS02 GDP N/A N/A P09207 39725029
    924250 9c6s:A (3.52) BS01 GTP N/A N/A P02552 39725029
    924251 9c6s:A (3.52) BS02 YGY N/A N/A P02552 39725029
    924252 9c6s:B (3.52) BS01 GDP N/A N/A P09207 39725029
    924253 9c6s:B (3.52) BS02 YGY N/A N/A P09207 39725029
    924254 9c6s:C (3.52) BS01 GTP N/A N/A P02552 39725029
    924255 9c6s:C (3.52) BS02 YGY N/A N/A P02552 39725029
    924256 9c6s:F (3.52) BS01 GDP N/A N/A P09207 39725029
    924257 9c6s:F (3.52) BS02 YGY N/A N/A P09207 39725029
    924258 9c6s:I (3.52) BS01 GTP N/A N/A P02552 39725029
    924259 9c6s:I (3.52) BS02 YGY N/A N/A P02552 39725029
    924260 9c6s:J (3.52) BS01 GDP N/A N/A P09207 39725029
    924261 9c6s:J (3.52) BS02 YGY N/A N/A P09207 39725029
    924262 9c6s:M (3.52) BS01 GTP N/A N/A P02552 39725029
    924263 9c6s:M (3.52) BS02 YGY N/A N/A P02552 39725029
    924264 9c6s:N (3.52) BS01 GDP N/A N/A P09207 39725029
    924265 9c6s:N (3.52) BS02 YGY N/A N/A P09207 39725029
    924266 9c6s:Q (3.52) BS01 GTP N/A N/A P02552 39725029
    924267 9c6s:Q (3.52) BS02 YGY N/A N/A P02552 39725029
    924268 9c6s:R (3.52) BS01 GDP N/A N/A P09207 39725029
    924269 9c6s:R (3.52) BS02 YGY N/A N/A P09207 39725029
    924270 9c6s:U (3.52) BS01 GTP N/A N/A P02552 39725029
    924271 9c6s:U (3.52) BS02 YGY N/A N/A P02552 39725029
    924272 9c6s:V (3.52) BS01 GDP N/A N/A P09207 39725029
    924273 9c6s:V (3.52) BS02 YGY N/A N/A P09207 39725029
    924274 9c6s:Y (3.52) BS01 GTP N/A N/A P02552 39725029
    924275 9c6s:Y (3.52) BS02 YGY N/A N/A P02552 39725029
    924276 9c6s:Z (3.52) BS01 GDP N/A N/A P09207 39725029
    924277 9c6s:Z (3.52) BS02 YGY N/A N/A P09207 39725029
    924278 9c6s:c (3.52) BS01 GTP N/A N/A P02552 39725029
    924279 9c6s:c (3.52) BS02 YGY N/A N/A P02552 39725029
    924280 9c6s:d (3.52) BS01 GDP N/A N/A P09207 39725029
    924281 9c6s:d (3.52) BS02 YGY N/A N/A P09207 39725029
    924282 9c6s:g (3.52) BS01 GTP N/A N/A P02552 39725029
    924283 9c6s:g (3.52) BS02 YGY N/A N/A P02552 39725029
    924284 9c6s:h (3.52) BS01 GDP N/A N/A P09207 39725029
    924285 9c6s:h (3.52) BS02 YGY N/A N/A P09207 39725029
    924286 9c76:A (2.3) BS01 GDP N/A N/A Q5S007 N/A
    924287 9c76:A (2.3) BS02 A1AWR N/A N/A Q5S007 N/A
    924288 9c76:A (2.3) BS03 A1AWR N/A N/A Q5S007 N/A
    924289 9c76:B (2.3) BS01 A1AWR N/A N/A Q5S007 N/A
    924290 9c76:B (2.3) BS02 GDP N/A N/A Q5S007 N/A
    924291 9c76:B (2.3) BS03 A1AWR N/A N/A Q5S007 N/A
    924292 9c77:A (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924293 9c77:A (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924294 9c77:A (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924295 9c77:A (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924296 9c77:B (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924297 9c77:B (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924298 9c77:B (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924299 9c77:B (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924300 9c77:C (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924301 9c77:C (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924302 9c77:C (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924303 9c77:C (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924304 9c77:D (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924305 9c77:D (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924306 9c77:D (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924307 9c77:D (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924308 9c77:E (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924309 9c77:E (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924310 9c77:E (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924311 9c77:E (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924312 9c77:F (3.2) BS01 rna N/A GO:0004000 ... A0A3C0QUR5 39471810
    924313 9c77:F (3.2) BS02 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924314 9c77:F (3.2) BS03 ATP N/A GO:0004000 ... A0A3C0QUR5 39471810
    924315 9c77:F (3.2) BS04 MG N/A GO:0004000 ... A0A3C0QUR5 39471810
    924316 9c79:H (1.46) BS01 peptide N/A N/A N/A 39745947
    924317 9c79:L (1.46) BS01 peptide N/A N/A N/A 39745947
    924318 9c7a:A (1.4) BS01 rna N/A N/A P26368 39388459
    924319 9c7b:A (1.4) BS01 rna N/A N/A P26368 39388459
    924320 9c7d:H (1.99) BS01 peptide N/A N/A N/A 39745947
    924321 9c7d:L (1.99) BS01 peptide N/A N/A N/A 39745947
    924322 9c7f:A (1.82) BS01 peptide N/A N/A N/A 39745947
    924323 9c7f:B (1.82) BS01 peptide N/A N/A N/A 39745947
    924324 9c7f:C (1.82) BS01 peptide N/A N/A N/A 39745947
    924325 9c7f:D (1.82) BS01 peptide N/A N/A N/A 39745947
    924326 9c7f:E (1.82) BS01 peptide N/A N/A N/A 39745947
    924327 9c7f:F (1.82) BS01 peptide N/A N/A N/A 39745947
    924328 9c7f:H (1.82) BS01 peptide N/A N/A N/A 39745947
    924329 9c7f:L (1.82) BS01 peptide N/A N/A N/A 39745947
    924330 9c7i:A (2.33) BS01 PG4 N/A GO:0000287 ... B1W019 39400323
    924331 9c7i:A (2.33) BS02 CA N/A GO:0000287 ... B1W019 39400323
    924332 9c7i:B (2.33) BS01 CA N/A GO:0000287 ... B1W019 39400323
    924333 9c7i:B (2.33) BS02 CA N/A GO:0000287 ... B1W019 39400323
    924334 9c7i:C (2.33) BS01 CA N/A GO:0000287 ... B1W019 39400323
    924335 9c7i:C (2.33) BS02 CA N/A GO:0000287 ... B1W019 39400323
    924336 9c7i:D (2.33) BS01 PG4 N/A GO:0000287 ... B1W019 39400323
    924337 9c7i:D (2.33) BS02 CA N/A GO:0000287 ... B1W019 39400323
    924338 9c7j:A (2.65) BS01 FPF N/A GO:0000287 ... B1W019 39400323
    924339 9c7j:A (2.65) BS02 PO4 N/A GO:0000287 ... B1W019 39400323
    924340 9c7j:A (2.65) BS03 MG N/A GO:0000287 ... B1W019 39400323
    924341 9c7j:B (2.65) BS01 FPF N/A GO:0000287 ... B1W019 39400323
    924342 9c7j:B (2.65) BS02 PO4 N/A GO:0000287 ... B1W019 39400323
    924343 9c7j:C (2.65) BS01 FPF N/A GO:0000287 ... B1W019 39400323
    924344 9c7j:D (2.65) BS01 FPF N/A GO:0000287 ... B1W019 39400323
    924345 9c7j:D (2.65) BS02 PO4 N/A GO:0000287 ... B1W019 39400323
    924346 9c7j:D (2.65) BS03 MG N/A GO:0000287 ... B1W019 39400323
    924347 9c7k:A (2.5) BS01 PG4 N/A GO:0016829 ... Q55012 39400323
    924348 9c7k:B (2.5) BS01 PG4 N/A GO:0016829 ... Q55012 39400323
    924349 9c7l:A (2.2) BS01 FPF N/A GO:0016829 ... Q55012 39400323
    924350 9c7l:A (2.2) BS02 MG N/A GO:0016829 ... Q55012 39400323
    924351 9c7m:A (2.65) BS01 FDF N/A GO:0016829 ... Q55012 39400323
    924352 9c7m:A (2.65) BS02 MG N/A GO:0016829 ... Q55012 39400323
    924353 9c7w:A (2.08) BS01 A1AUY N/A N/A U3M7V0 39332817
    924354 9c7w:B (2.08) BS01 A1AUY N/A N/A U3M7V0 39332817
    924355 9c7w:C (2.08) BS01 A1AUY N/A N/A U3M7V0 39332817
    924356 9c7w:D (2.08) BS01 A1AUY N/A N/A U3M7V0 39332817
    924357 9c7y:A (3.24) BS01 A1AWZ N/A N/A P28887 39291020
    924358 9c80:A (1.77) BS01 A1AUX N/A N/A P0DTD1 39332817
    924359 9c80:B (1.77) BS01 A1AUX N/A N/A P0DTD1 39332817
    924360 9c81:A (1.7) BS01 A1AU0 N/A GO:0008800 ... P00811 39753705
    924361 9c81:B (1.7) BS01 A1AU0 N/A GO:0008800 ... P00811 39753705
    924362 9c83:A (2.9) BS01 A1AUZ N/A GO:0008800 ... P00811 N/A
    924363 9c83:B (2.9) BS01 A1AUZ N/A GO:0008800 ... P00811 N/A
    924364 9c84:A (1.7) BS01 A1AU1 N/A GO:0008800 ... P00811 39753705
    924365 9c84:B (1.7) BS01 A1AU1 N/A GO:0008800 ... P00811 39753705
    924366 9c87:A (3.7) BS01 ATP N/A N/A P0A6H1 N/A
    924367 9c87:B (3.7) BS01 ATP N/A N/A P0A6H1 N/A
    924368 9c87:B (3.7) BS02 ATP N/A N/A P0A6H1 N/A
    924369 9c87:C (3.7) BS01 ATP N/A N/A P0A6H1 N/A
    924370 9c87:D (3.7) BS01 ADP N/A N/A P0A6H1 N/A
    924371 9c87:E (3.7) BS01 ADP N/A N/A P0A6H1 N/A
    924372 9c87:F (3.7) BS01 ADP N/A N/A P0A6H1 N/A
    924373 9c87:S (3.7) BS01 MTX N/A GO:0004146 ... P0ABQ4 N/A
    924374 9c88:A (2.6) BS01 peptide N/A N/A P0A6H1 N/A
    924375 9c88:A (2.6) BS02 ATP N/A N/A P0A6H1 N/A
    924376 9c88:A (2.6) BS03 MG N/A N/A P0A6H1 N/A
    924377 9c88:B (2.6) BS01 peptide N/A N/A P0A6H1 N/A
    924378 9c88:B (2.6) BS02 ATP N/A N/A P0A6H1 N/A
    924379 9c88:B (2.6) BS03 ATP N/A N/A P0A6H1 N/A
    924380 9c88:B (2.6) BS04 MG N/A N/A P0A6H1 N/A
    924381 9c88:C (2.6) BS01 peptide N/A N/A P0A6H1 N/A
    924382 9c88:C (2.6) BS02 ATP N/A N/A P0A6H1 N/A
    924383 9c88:C (2.6) BS03 ATP N/A N/A P0A6H1 N/A
    924384 9c88:C (2.6) BS04 MG N/A N/A P0A6H1 N/A
    924385 9c88:D (2.6) BS01 peptide N/A N/A P0A6H1 N/A
    924386 9c88:D (2.6) BS02 ATP N/A N/A P0A6H1 N/A
    924387 9c88:D (2.6) BS03 ADP N/A N/A P0A6H1 N/A
    924388 9c88:E (2.6) BS01 peptide N/A N/A P0A6H1 N/A
    924389 9c88:E (2.6) BS02 ADP N/A N/A P0A6H1 N/A
    924390 9c88:F (2.6) BS01 ADP N/A N/A P0A6H1 N/A
    924391 9c8a:A (1.54) BS01 FDA N/A N/A F7X6I3 39437336
    924392 9c8a:A (1.54) BS02 FAD N/A N/A F7X6I3 39437336
    924393 9c8a:B (1.54) BS01 FDA N/A N/A F7X6I3 39437336
    924394 9c8a:B (1.54) BS02 FAD N/A N/A F7X6I3 39437336
    924395 9c8a:B (1.54) BS03 CBG N/A N/A F7X6I3 39437336
    924396 9c8b:A (1.52) BS01 FDA N/A N/A F7X6I3 39437336
    924397 9c8b:A (1.52) BS02 FAD N/A N/A F7X6I3 39437336
    924398 9c8b:B (1.52) BS01 FDA N/A N/A F7X6I3 39437336
    924399 9c8b:B (1.52) BS02 FAD N/A N/A F7X6I3 39437336
    924400 9c8b:B (1.52) BS03 CBG N/A N/A F7X6I3 39437336

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).