SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    926201 9cpb:SH (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926202 9cpb:SI (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926203 9cpb:SJ (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926204 9cpb:SK (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926205 9cpb:SL (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926206 9cpb:SL (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926207 9cpb:SM (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926208 9cpb:TC (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926209 9cpb:TD (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926210 9cpb:TE (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926211 9cpb:TF (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926212 9cpb:TF (3.52) BS02 MG N/A GO:0000226 ... Q3MHM5 39743588
    926213 9cpb:TF (3.52) BS03 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926214 9cpb:TG (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926215 9cpb:TH (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926216 9cpb:TH (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926217 9cpb:TI (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926218 9cpb:TJ (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926219 9cpb:TK (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926220 9cpb:TL (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926221 9cpb:TL (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926222 9cpb:TM (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926223 9cpb:UC (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926224 9cpb:UD (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926225 9cpb:UE (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926226 9cpb:UF (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926227 9cpb:UG (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926228 9cpb:UG (3.52) BS02 MG N/A GO:0000226 ... Q2HJ86 39743588
    926229 9cpb:UH (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926230 9cpb:UI (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926231 9cpb:UJ (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926232 9cpb:UJ (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926233 9cpb:UK (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926234 9cpb:UK (3.52) BS02 MG N/A GO:0000226 ... Q2HJ86 39743588
    926235 9cpb:UL (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926236 9cpb:UM (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926237 9cpb:VC (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926238 9cpb:VC (3.52) BS02 MG N/A GO:0000226 ... Q2HJ86 39743588
    926239 9cpb:VD (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926240 9cpb:VE (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926241 9cpb:VF (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926242 9cpb:VG (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926243 9cpb:VH (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926244 9cpb:VI (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926245 9cpb:VJ (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926246 9cpb:VJ (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926247 9cpb:VK (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926248 9cpb:VL (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926249 9cpb:VM (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926250 9cpb:WC (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926251 9cpb:WC (3.52) BS02 MG N/A GO:0000226 ... Q2HJ86 39743588
    926252 9cpb:WD (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926253 9cpb:WE (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926254 9cpb:WF (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926255 9cpb:WG (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926256 9cpb:WH (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926257 9cpb:WI (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926258 9cpb:WJ (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926259 9cpb:WJ (3.52) BS02 GTP N/A GO:0000226 ... Q3MHM5 39743588
    926260 9cpb:WK (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926261 9cpb:WK (3.52) BS02 MG N/A GO:0000226 ... Q2HJ86 39743588
    926262 9cpb:WL (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926263 9cpb:WM (3.52) BS01 GTP N/A GO:0000226 ... Q2HJ86 39743588
    926264 9cpb:WN (3.52) BS01 GDP N/A GO:0000226 ... Q3MHM5 39743588
    926265 9cpc:3Y (3.65) BS01 peptide N/A GO:0005856 ... F1SM62 39743588
    926266 9cpc:5B (3.65) BS01 peptide N/A GO:0005737 ... A0A287B1D0 39743588
    926267 9cpc:AA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926268 9cpc:AB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926269 9cpc:AE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926270 9cpc:AF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926271 9cpc:AG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926272 9cpc:AH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926273 9cpc:AL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926274 9cpc:AM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926275 9cpc:AN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926276 9cpc:AN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926277 9cpc:AO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926278 9cpc:AP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926279 9cpc:BA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926280 9cpc:BB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926281 9cpc:BE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926282 9cpc:BF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926283 9cpc:BG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926284 9cpc:BH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926285 9cpc:BI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926286 9cpc:BL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926287 9cpc:BM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926288 9cpc:BN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926289 9cpc:BO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926290 9cpc:BP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926291 9cpc:CA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926292 9cpc:CB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926293 9cpc:CE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926294 9cpc:CF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926295 9cpc:CG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926296 9cpc:CH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926297 9cpc:CI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926298 9cpc:CL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926299 9cpc:CM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926300 9cpc:CN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926301 9cpc:CO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926302 9cpc:CO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926303 9cpc:CP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926304 9cpc:DA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926305 9cpc:DB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926306 9cpc:DE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926307 9cpc:DF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926308 9cpc:DG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926309 9cpc:DH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926310 9cpc:DI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926311 9cpc:DL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926312 9cpc:DM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926313 9cpc:DN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926314 9cpc:DO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926315 9cpc:DP (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926316 9cpc:DP (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926317 9cpc:EA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926318 9cpc:EB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926319 9cpc:EB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926320 9cpc:EE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926321 9cpc:EF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926322 9cpc:EG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926323 9cpc:EH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926324 9cpc:EI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926325 9cpc:EL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926326 9cpc:EM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926327 9cpc:EN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926328 9cpc:EO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926329 9cpc:EO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926330 9cpc:EP (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926331 9cpc:EP (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926332 9cpc:FA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926333 9cpc:FB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926334 9cpc:FE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926335 9cpc:FF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926336 9cpc:FG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926337 9cpc:FH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926338 9cpc:FI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926339 9cpc:FM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926340 9cpc:FM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926341 9cpc:FN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926342 9cpc:FO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926343 9cpc:FO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926344 9cpc:FP (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926345 9cpc:FP (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926346 9cpc:GA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926347 9cpc:GB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926348 9cpc:GB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926349 9cpc:GE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926350 9cpc:GF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926351 9cpc:GG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926352 9cpc:GH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926353 9cpc:GI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926354 9cpc:GM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926355 9cpc:GM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926356 9cpc:GN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926357 9cpc:GN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926358 9cpc:GO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926359 9cpc:GP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926360 9cpc:HA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926361 9cpc:HB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926362 9cpc:HE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926363 9cpc:HF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926364 9cpc:HG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926365 9cpc:HH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926366 9cpc:HI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926367 9cpc:HM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926368 9cpc:HM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926369 9cpc:HN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926370 9cpc:HO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926371 9cpc:HP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926372 9cpc:HQ (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926373 9cpc:IA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926374 9cpc:IB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926375 9cpc:IE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926376 9cpc:IF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926377 9cpc:IG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926378 9cpc:IH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926379 9cpc:II (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926380 9cpc:IM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926381 9cpc:IM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926382 9cpc:IN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926383 9cpc:IN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926384 9cpc:IO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926385 9cpc:IP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926386 9cpc:IQ (3.65) BS01 peptide N/A GO:0005525 ... A0A5G2QGK1 39743588
    926387 9cpc:IQ (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926388 9cpc:JA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926389 9cpc:JB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926390 9cpc:JD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926391 9cpc:JE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926392 9cpc:JF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926393 9cpc:JG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926394 9cpc:JH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926395 9cpc:JL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926396 9cpc:JM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926397 9cpc:JN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926398 9cpc:JN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926399 9cpc:JO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926400 9cpc:JO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).