SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    926401 9cpc:KA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926402 9cpc:KB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926403 9cpc:KB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926404 9cpc:KD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926405 9cpc:KE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926406 9cpc:KF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926407 9cpc:KG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926408 9cpc:KH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926409 9cpc:KL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926410 9cpc:KM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926411 9cpc:KM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926412 9cpc:KN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926413 9cpc:KO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926414 9cpc:KP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926415 9cpc:LA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926416 9cpc:LB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926417 9cpc:LD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926418 9cpc:LE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926419 9cpc:LF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926420 9cpc:LG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926421 9cpc:LH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926422 9cpc:LL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926423 9cpc:LM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926424 9cpc:LM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926425 9cpc:LN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926426 9cpc:LO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926427 9cpc:LP (3.65) BS01 peptide N/A GO:0005525 ... A0A5G2QGK1 39743588
    926428 9cpc:LP (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926429 9cpc:MA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926430 9cpc:MB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926431 9cpc:MB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926432 9cpc:MD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926433 9cpc:ME (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926434 9cpc:MF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926435 9cpc:MG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926436 9cpc:MH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926437 9cpc:ML (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926438 9cpc:ML (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926439 9cpc:MM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926440 9cpc:MN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926441 9cpc:MO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926442 9cpc:MP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926443 9cpc:NA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926444 9cpc:NB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926445 9cpc:ND (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926446 9cpc:NE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926447 9cpc:NF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926448 9cpc:NG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926449 9cpc:NH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926450 9cpc:NL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926451 9cpc:NM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926452 9cpc:NN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926453 9cpc:NO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926454 9cpc:NP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926455 9cpc:OA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926456 9cpc:OB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926457 9cpc:OB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926458 9cpc:OD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926459 9cpc:OE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926460 9cpc:OF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926461 9cpc:OG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926462 9cpc:OH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926463 9cpc:OL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926464 9cpc:OM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926465 9cpc:OM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926466 9cpc:ON (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926467 9cpc:OO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926468 9cpc:OO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926469 9cpc:OP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926470 9cpc:PA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926471 9cpc:PB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926472 9cpc:PB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926473 9cpc:PD (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926474 9cpc:PE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926475 9cpc:PF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926476 9cpc:PG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926477 9cpc:PH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926478 9cpc:PL (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926479 9cpc:PL (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926480 9cpc:PM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926481 9cpc:PM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926482 9cpc:PN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926483 9cpc:PO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926484 9cpc:PP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926485 9cpc:QA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926486 9cpc:QB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926487 9cpc:QB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926488 9cpc:QE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926489 9cpc:QF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926490 9cpc:QG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926491 9cpc:QH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926492 9cpc:QL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926493 9cpc:QM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926494 9cpc:QM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926495 9cpc:QN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926496 9cpc:QN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926497 9cpc:QO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926498 9cpc:QP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926499 9cpc:RA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926500 9cpc:RB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926501 9cpc:RE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926502 9cpc:RF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926503 9cpc:RG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926504 9cpc:RH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926505 9cpc:RI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926506 9cpc:RL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926507 9cpc:RM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926508 9cpc:RM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926509 9cpc:RN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926510 9cpc:RN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926511 9cpc:RO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926512 9cpc:RO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926513 9cpc:RP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926514 9cpc:SA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926515 9cpc:SB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926516 9cpc:SE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926517 9cpc:SF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926518 9cpc:SG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926519 9cpc:SH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926520 9cpc:SI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926521 9cpc:SL (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926522 9cpc:SM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926523 9cpc:SN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926524 9cpc:SO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926525 9cpc:SP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926526 9cpc:TA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926527 9cpc:TB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926528 9cpc:TE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926529 9cpc:TF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926530 9cpc:TG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926531 9cpc:TH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926532 9cpc:TI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926533 9cpc:TL (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926534 9cpc:TL (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926535 9cpc:TM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926536 9cpc:TN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926537 9cpc:TN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926538 9cpc:TO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926539 9cpc:TO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926540 9cpc:TP (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926541 9cpc:TP (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926542 9cpc:UA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926543 9cpc:UB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926544 9cpc:UB (3.65) BS02 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926545 9cpc:UE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926546 9cpc:UF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926547 9cpc:UG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926548 9cpc:UH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926549 9cpc:UI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926550 9cpc:UM (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926551 9cpc:UM (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926552 9cpc:UN (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926553 9cpc:UN (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926554 9cpc:UO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926555 9cpc:UO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926556 9cpc:UP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926557 9cpc:VA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926558 9cpc:VB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926559 9cpc:VF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926560 9cpc:VG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926561 9cpc:VH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926562 9cpc:VI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926563 9cpc:VJ (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926564 9cpc:VN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926565 9cpc:VO (3.65) BS01 GTP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926566 9cpc:VO (3.65) BS02 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926567 9cpc:VP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926568 9cpc:VQ (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926569 9cpc:WA (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926570 9cpc:WB (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926571 9cpc:WE (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926572 9cpc:WF (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926573 9cpc:WG (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926574 9cpc:WH (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926575 9cpc:WI (3.65) BS01 GTP N/A GO:0000226 ... A0A5G2QX54 39743588
    926576 9cpc:WM (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926577 9cpc:WN (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926578 9cpc:WO (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926579 9cpc:WP (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926580 9cpc:WQ (3.65) BS01 GDP N/A GO:0005525 ... A0A5G2QGK1 39743588
    926581 9cpm:A (1.6) BS01 CU N/A N/A Q72HW2 39859450
    926582 9cpm:A (1.6) BS02 CU N/A N/A Q72HW2 39859450
    926583 9cpm:A (1.6) BS03 CU N/A N/A Q72HW2 39859450
    926584 9cpm:A (1.6) BS04 CU N/A N/A Q72HW2 39859450
    926585 9cpo:A (3.5) BS01 rna N/A GO:0003723 ... A0A8E8HBN7 39091740
    926586 9cpo:A (3.5) BS02 rna N/A GO:0003723 ... A0A8E8HBN7 39091740
    926587 9cpo:A (3.5) BS03 ZN N/A GO:0003723 ... A0A8E8HBN7 39091740
    926588 9cpo:A (3.5) BS04 ZN N/A GO:0003723 ... A0A8E8HBN7 39091740
    926589 9cpo:B (3.5) BS01 rna N/A GO:0004197 ... A0A8E8HBN7 39091740
    926590 9cpo:B (3.5) BS02 rna N/A GO:0004197 ... A0A8E8HBN7 39091740
    926591 9cpo:D (3.5) BS01 rna N/A GO:0004197 ... A0A8E8HBN7 39091740
    926592 9cpo:D (3.5) BS02 rna N/A GO:0004197 ... A0A8E8HBN7 39091740
    926593 9cq2:A (2.2) BS01 ACT N/A N/A A6LM40 39869497
    926594 9cq2:A (2.2) BS02 MG N/A N/A A6LM40 39869497
    926595 9cq4:A (3.27) BS01 peptide N/A N/A N/A 39747888
    926596 9cq4:A (3.27) BS02 CLR N/A N/A N/A 39747888
    926597 9cq4:B (3.27) BS01 peptide N/A N/A N/A 39747888
    926598 9cq4:Z (3.27) BS01 peptide N/A N/A P20963 39747888
    926599 9cq5:A (2.5) BS01 MN N/A N/A P00875 39094246
    926600 9cq5:A (2.5) BS02 CAP N/A N/A P00875 39094246

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).