SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    926601 9cq5:A (2.5) BS03 CAP N/A N/A P00875 39094246
    926602 9cq5:B (2.5) BS01 CAP N/A N/A P00875 39094246
    926603 9cq5:B (2.5) BS02 MN N/A N/A P00875 39094246
    926604 9cq5:B (2.5) BS03 CAP N/A N/A P00875 39094246
    926605 9cq5:C (2.5) BS01 MN N/A N/A P00875 39094246
    926606 9cq5:C (2.5) BS02 CAP N/A N/A P00875 39094246
    926607 9cq5:D (2.5) BS01 CAP N/A N/A P00875 39094246
    926608 9cq5:D (2.5) BS02 MN N/A N/A P00875 39094246
    926609 9cq5:D (2.5) BS03 CAP N/A N/A P00875 39094246
    926610 9cq5:E (2.5) BS01 MN N/A N/A P00875 39094246
    926611 9cq5:E (2.5) BS02 CAP N/A N/A P00875 39094246
    926612 9cq5:E (2.5) BS03 CAP N/A N/A P00875 39094246
    926613 9cq5:F (2.5) BS01 CAP N/A N/A P00875 39094246
    926614 9cq5:F (2.5) BS02 MN N/A N/A P00875 39094246
    926615 9cq5:F (2.5) BS03 CAP N/A N/A P00875 39094246
    926616 9cq5:G (2.5) BS01 MN N/A N/A P00875 39094246
    926617 9cq5:G (2.5) BS02 CAP N/A N/A P00875 39094246
    926618 9cq5:G (2.5) BS03 CAP N/A N/A P00875 39094246
    926619 9cq5:H (2.5) BS01 CAP N/A N/A P00875 39094246
    926620 9cq5:H (2.5) BS02 MN N/A N/A P00875 39094246
    926621 9cq5:H (2.5) BS03 CAP N/A N/A P00875 39094246
    926622 9cqa:D (1.74) BS01 peptide N/A N/A N/A N/A
    926623 9cqa:E (1.74) BS01 peptide N/A N/A N/A N/A
    926624 9cqa:F (1.74) BS01 peptide N/A N/A N/A N/A
    926625 9cqa:G (1.74) BS01 peptide N/A N/A N/A N/A
    926626 9cqb:A (2.5) BS01 peptide N/A N/A N/A N/A
    926627 9cqb:B (2.5) BS01 peptide N/A N/A N/A N/A
    926628 9cqd:W (3.1) BS01 peptide N/A N/A N/A N/A
    926629 9cqd:X (3.1) BS01 peptide N/A N/A N/A N/A
    926630 9cqd:Y (3.1) BS01 peptide N/A N/A N/A N/A
    926631 9cqd:Z (3.1) BS01 peptide N/A N/A N/A N/A
    926632 9cqd:j (3.1) BS01 peptide N/A N/A P03423 N/A
    926633 9cra:A (2.34) BS01 NAD N/A N/A O95544 39854463
    926634 9cra:A (2.34) BS02 NAD N/A N/A O95544 39854463
    926635 9cra:B (2.34) BS01 NAD N/A N/A O95544 39854463
    926636 9cra:B (2.34) BS02 NAD N/A N/A O95544 39854463
    926637 9cra:C (2.34) BS01 NAD N/A N/A O95544 39854463
    926638 9cra:C (2.34) BS02 NAD N/A N/A O95544 39854463
    926639 9cra:D (2.34) BS01 NAD N/A N/A O95544 39854463
    926640 9cra:D (2.34) BS02 NAD N/A N/A O95544 39854463
    926641 9crd:B (3.5) BS01 FUC N/A N/A P0DTC2 39543395
    926642 9crg:A (3.3) BS01 FUC N/A N/A P0DTC2 39543395
    926643 9crs:A (2.9) BS01 ABU N/A N/A P47870 39843743
    926644 9crs:B (2.9) BS01 ABU N/A N/A P14867 39843743
    926645 9crs:B (2.9) BS02 PIO N/A N/A P14867 39843743
    926646 9crs:C (2.9) BS01 ABU N/A N/A P47870 39843743
    926647 9crs:D (2.9) BS01 ABU N/A N/A P14867 39843743
    926648 9crs:D (2.9) BS02 PIO N/A N/A P14867 39843743
    926649 9crs:E (2.9) BS01 MAN N/A N/A P18507 39843743
    926650 9crs:E (2.9) BS02 MAN N/A N/A P18507 39843743
    926651 9crv:A (3.18) BS01 ABU N/A N/A P47870 39843743
    926652 9crv:B (3.18) BS01 ABU N/A N/A P14867 39843743
    926653 9crv:B (3.18) BS02 PIO N/A N/A P14867 39843743
    926654 9crv:C (3.18) BS01 MAN N/A N/A P18507 39843743
    926655 9crv:D (3.18) BS01 ABU N/A N/A P47870 39843743
    926656 9crv:E (3.18) BS01 PIO N/A N/A P47869 39843743
    926657 9cry:A (2.6) BS01 MG N/A N/A A6LM40 39869497
    926658 9cry:B (2.6) BS01 ACT N/A N/A A6LM39 39869497
    926659 9cry:C (2.6) BS01 ACT N/A N/A A6LM39 39869497
    926660 9cry:D (2.6) BS01 ACT N/A N/A A6LM40 39869497
    926661 9csb:B (3.34) BS01 PIO N/A N/A P14867 39843743
    926662 9csb:D (3.34) BS01 PIO N/A N/A P47869 39843743
    926663 9csb:E (3.34) BS01 MAN N/A N/A P18507 39843743
    926664 9csc:A (2.0) BS01 ACT N/A N/A A6LM40 39869497
    926665 9csc:B (2.0) BS01 ACT N/A N/A A6LM39 39869497
    926666 9csc:C (2.0) BS01 ACT N/A N/A A6LM39 39869497
    926667 9csc:D (2.0) BS01 ACT N/A N/A A6LM40 39869497
    926668 9csg:A (1.914) BS01 A1AZR N/A GO:0003677 ... P02768 39172133
    926669 9csi:A (2.8) BS01 ANP N/A GO:0005524 ... A0A6F8TGG1 39172133
    926670 9csi:A (2.8) BS02 MG N/A GO:0005524 ... A0A6F8TGG1 39172133
    926671 9csi:A (2.8) BS03 A1AZS N/A GO:0005524 ... A0A6F8TGG1 39172133
    926672 9csl:A (2.1) BS01 IPE N/A N/A O95749 39813274
    926673 9cst:A (1.13) BS01 QG7 N/A N/A P22629 39600509
    926674 9csu:A (1.6) BS01 QG7 N/A N/A P22629 39600509
    926675 9csv:A (1.6) BS01 QG7 N/A N/A P22629 39600509
    926676 9csw:A (1.3) BS01 QG7 N/A N/A P22629 39600509
    926677 9csy:A (2.595) BS01 A1AZ1 N/A N/A P0DTC1 39213347
    926678 9csy:A (2.595) BS02 ZN N/A N/A P0DTC1 39213347
    926679 9csy:B (2.595) BS01 A1AZ1 N/A N/A P0DTC1 39213347
    926680 9csy:B (2.595) BS02 ZN N/A N/A P0DTC1 39213347
    926681 9csy:C (2.595) BS01 A1AZ1 N/A N/A P0DTC1 39213347
    926682 9ct0:A (3.19) BS01 ABU N/A N/A P47870 39843743
    926683 9ct0:B (3.19) BS01 ABU N/A N/A P14867 39843743
    926684 9ct0:B (3.19) BS02 PIO N/A N/A P14867 39843743
    926685 9ct0:C (3.19) BS01 ABU N/A N/A P47870 39843743
    926686 9ct0:D (3.19) BS01 ABU N/A N/A P47869 39843743
    926687 9ct0:D (3.19) BS02 PIO N/A N/A P47869 39843743
    926688 9ct0:E (3.19) BS01 MAN N/A N/A P18507 39843743
    926689 9ctc:A (3.6) BS01 ATP N/A N/A P08183 39806099
    926690 9ctc:A (3.6) BS02 ZQU N/A N/A P08183 39806099
    926691 9ctc:A (3.6) BS03 ZQU N/A N/A P08183 39806099
    926692 9ctd:A (1.9) BS01 ACT N/A N/A A6LM40 39869497
    926693 9ctd:B (1.9) BS01 ACT N/A N/A A6LM39 39869497
    926694 9ctd:B (1.9) BS02 COA N/A N/A A6LM39 39869497
    926695 9ctd:C (1.9) BS01 ACT N/A N/A A6LM39 39869497
    926696 9ctd:C (1.9) BS02 COA N/A N/A A6LM39 39869497
    926697 9ctd:D (1.9) BS01 ACT N/A N/A A6LM40 39869497
    926698 9ctf:A (3.9) BS01 ATP N/A N/A P08183 39806099
    926699 9ctf:A (3.9) BS02 TA1 N/A N/A P08183 39806099
    926700 9ctg:A (3.4) BS01 MG N/A N/A P08183 39806099
    926701 9ctg:A (3.4) BS02 AGS N/A N/A P08183 39806099
    926702 9ctg:A (3.4) BS03 AGS N/A N/A P08183 39806099
    926703 9cti:A (3.03) BS01 MLC N/A N/A N/A 39913209
    926704 9cti:B (3.03) BS01 MLC N/A N/A N/A 39913209
    926705 9ctj:E (3.74) BS01 MAN N/A N/A P18507 39843743
    926706 9ctk:A (2.92) BS01 NAP N/A N/A N/A 39913209
    926707 9ctk:B (2.92) BS01 NAP N/A N/A N/A 39913209
    926708 9ctl:A (3.15) BS01 MLC N/A N/A N/A 39913209
    926709 9ctl:A (3.15) BS02 NAP N/A N/A N/A 39913209
    926710 9ctl:B (3.15) BS01 MLC N/A N/A N/A 39913209
    926711 9ctl:B (3.15) BS02 NAP N/A N/A N/A 39913209
    926712 9ctn:A (3.11) BS01 NDP N/A N/A N/A 39913209
    926713 9ctn:A (3.11) BS02 6VG N/A N/A N/A 39913209
    926714 9ctn:B (3.11) BS01 NDP N/A N/A N/A 39913209
    926715 9ctn:B (3.11) BS02 6VG N/A N/A N/A 39913209
    926716 9cto:A (3.1) BS01 NDP N/A N/A N/A 39913209
    926717 9cto:A (3.1) BS02 6VG N/A N/A N/A 39913209
    926718 9cto:B (3.1) BS01 NDP N/A N/A N/A 39913209
    926719 9cto:B (3.1) BS02 6VG N/A N/A N/A 39913209
    926720 9ctp:B (3.62) BS01 PIO N/A N/A P14867 39843743
    926721 9ctp:D (3.62) BS01 PIO N/A N/A P34903 39843743
    926722 9ctq:A (2.41) BS01 CA N/A GO:0005229 ... O76090 39277606
    926723 9ctq:A (2.41) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926724 9ctq:B (2.41) BS01 CA N/A GO:0005229 ... O76090 39277606
    926725 9ctq:B (2.41) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926726 9ctq:C (2.41) BS01 CA N/A GO:0005229 ... O76090 39277606
    926727 9ctq:C (2.41) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926728 9ctq:D (2.41) BS01 CA N/A GO:0005229 ... O76090 39277606
    926729 9ctq:D (2.41) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926730 9ctq:E (2.41) BS01 CA N/A GO:0005229 ... O76090 39277606
    926731 9ctq:E (2.41) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926732 9ctr:A (2.42) BS01 ABU N/A GO:0005229 ... O76090 39277606
    926733 9ctr:A (2.42) BS02 CA N/A GO:0005229 ... O76090 39277606
    926734 9ctr:A (2.42) BS03 ABU N/A GO:0005229 ... O76090 39277606
    926735 9ctr:B (2.42) BS01 CA N/A GO:0005229 ... O76090 39277606
    926736 9ctr:B (2.42) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926737 9ctr:B (2.42) BS03 ABU N/A GO:0005229 ... O76090 39277606
    926738 9ctr:C (2.42) BS01 ABU N/A GO:0005229 ... O76090 39277606
    926739 9ctr:C (2.42) BS02 CA N/A GO:0005229 ... O76090 39277606
    926740 9ctr:D (2.42) BS01 CA N/A GO:0005229 ... O76090 39277606
    926741 9ctr:D (2.42) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926742 9ctr:E (2.42) BS01 CA N/A GO:0005229 ... O76090 39277606
    926743 9ctr:E (2.42) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926744 9cts:A (2.45) BS01 ABU N/A GO:0005229 ... O76090 39277606
    926745 9cts:A (2.45) BS02 CA N/A GO:0005229 ... O76090 39277606
    926746 9cts:A (2.45) BS03 ABU N/A GO:0005229 ... O76090 39277606
    926747 9cts:B (2.45) BS01 CA N/A GO:0005229 ... O76090 39277606
    926748 9cts:B (2.45) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926749 9cts:B (2.45) BS03 ABU N/A GO:0005229 ... O76090 39277606
    926750 9cts:C (2.45) BS01 CA N/A GO:0005229 ... O76090 39277606
    926751 9cts:C (2.45) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926752 9cts:D (2.45) BS01 ABU N/A GO:0005229 ... O76090 39277606
    926753 9cts:D (2.45) BS02 CA N/A GO:0005229 ... O76090 39277606
    926754 9cts:E (2.45) BS01 CA N/A GO:0005229 ... O76090 39277606
    926755 9cts:E (2.45) BS02 ABU N/A GO:0005229 ... O76090 39277606
    926756 9cts:E (2.45) BS03 ABU N/A GO:0005229 ... O76090 39277606
    926757 9ctt:A (2.5) BS01 CA N/A GO:0005229 ... O76090 39277606
    926758 9ctt:B (2.5) BS01 CA N/A GO:0005229 ... O76090 39277606
    926759 9ctt:C (2.5) BS01 CA N/A GO:0005229 ... O76090 39277606
    926760 9ctt:D (2.5) BS01 CA N/A GO:0005229 ... O76090 39277606
    926761 9ctt:E (2.5) BS01 CA N/A GO:0005229 ... O76090 39277606
    926762 9ctu:A (3.03) BS01 1PX N/A GO:0005515 ... P0DTC5 39574576
    926763 9ctu:B (3.03) BS01 1PX N/A GO:0005515 ... P0DTC5 39574576
    926764 9ctv:B (3.36) BS01 PIO N/A N/A P14867 39843743
    926765 9ctv:E (3.36) BS01 PIO N/A N/A P47869 39843743
    926766 9ctx:A (1.55) BS01 017 N/A GO:0004190 ... O38893 N/A
    926767 9ctz:A (2.67) BS01 ICS N/A N/A P07328 39779844
    926768 9ctz:A (2.67) BS02 CLF N/A N/A P07328 39779844
    926769 9ctz:B (2.67) BS01 FE N/A N/A P07329 39779844
    926770 9ctz:B (2.67) BS02 CLF N/A N/A P07329 39779844
    926771 9ctz:B (2.67) BS03 FE N/A N/A P07329 39779844
    926772 9ctz:C (2.67) BS01 ICS N/A N/A P07328 39779844
    926773 9ctz:C (2.67) BS02 CLF N/A N/A P07328 39779844
    926774 9ctz:D (2.67) BS01 FE N/A N/A P07329 39779844
    926775 9ctz:D (2.67) BS02 FE N/A N/A P07329 39779844
    926776 9ctz:D (2.67) BS03 CLF N/A N/A P07329 39779844
    926777 9cu0:A (3.94) BS01 ICS N/A N/A P07328 39779844
    926778 9cu0:A (3.94) BS02 CLF N/A N/A P07328 39779844
    926779 9cu0:B (3.94) BS01 CLF N/A N/A P07329 39779844
    926780 9cu0:B (3.94) BS02 FE N/A N/A P07329 39779844
    926781 9cu0:B (3.94) BS03 FE N/A N/A P07329 39779844
    926782 9cu0:C (3.94) BS01 ICS N/A N/A P07328 39779844
    926783 9cu0:C (3.94) BS02 CLF N/A N/A P07328 39779844
    926784 9cu0:D (3.94) BS01 FE N/A N/A P07329 39779844
    926785 9cu0:D (3.94) BS02 FE N/A N/A P07329 39779844
    926786 9cu0:D (3.94) BS03 CLF N/A N/A P07329 39779844
    926787 9cu0:E (3.94) BS01 ADP N/A N/A P00459 39779844
    926788 9cu0:E (3.94) BS02 MG N/A N/A P00459 39779844
    926789 9cu0:E (3.94) BS03 SF4 N/A N/A P00459 39779844
    926790 9cu0:F (3.94) BS01 SF4 N/A N/A P00459 39779844
    926791 9cu0:F (3.94) BS02 ADP N/A N/A P00459 39779844
    926792 9cu0:G (3.94) BS01 FES N/A N/A Q44501 39779844
    926793 9cu1:A (2.83) BS01 ICS N/A N/A P07328 39779844
    926794 9cu1:A (2.83) BS02 CLF N/A N/A P07328 39779844
    926795 9cu1:B (2.83) BS01 CLF N/A N/A P07329 39779844
    926796 9cu1:B (2.83) BS02 FE N/A N/A P07329 39779844
    926797 9cu1:B (2.83) BS03 FE N/A N/A P07329 39779844
    926798 9cu1:C (2.83) BS01 ICS N/A N/A P07328 39779844
    926799 9cu1:C (2.83) BS02 CLF N/A N/A P07328 39779844
    926800 9cu1:D (2.83) BS01 FE N/A N/A P07329 39779844

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).