SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    92601 2ja3:C (3.05) BS01 ADP ? N/A P51795 17195847
    92602 2ja3:D (3.05) BS01 ADP ? N/A P51795 17195847
    92603 2ja3:E (3.05) BS01 ADP ? N/A P51795 17195847
    92604 2ja3:F (3.05) BS01 ADP ? N/A P51795 17195847
    92605 2ja5:A (3.8) BS01 rna 2.7.7.6 GO:0001172 ... P04050 17290000
    92606 2ja5:A (3.8) BS02 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92607 2ja5:A (3.8) BS03 MG 2.7.7.6 GO:0001172 ... P04050 17290000
    92608 2ja5:A (3.8) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 17290000
    92609 2ja5:B (3.8) BS01 rna 2.7.7.6 GO:0001172 ... P08518 17290000
    92610 2ja5:B (3.8) BS02 dna 2.7.7.6 GO:0001172 ... P08518 17290000
    92611 2ja5:B (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 17290000
    92612 2ja5:C (3.8) BS01 ZN ? GO:0000428 ... P16370 17290000
    92613 2ja5:I (3.8) BS01 ZN ? GO:0001172 ... P27999 17290000
    92614 2ja5:J (3.8) BS01 ZN ? GO:0001172 ... P22139 17290000
    92615 2ja5:L (3.8) BS01 ZN ? GO:0001172 ... P40422 17290000
    92616 2ja6:A (4.0) BS01 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92617 2ja6:A (4.0) BS02 rna 2.7.7.6 GO:0001172 ... P04050 17290000
    92618 2ja6:A (4.0) BS03 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92619 2ja6:A (4.0) BS04 MG 2.7.7.6 GO:0001172 ... P04050 17290000
    92620 2ja6:A (4.0) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 17290000
    92621 2ja6:B (4.0) BS01 rna 2.7.7.6 GO:0001172 ... P08518 17290000
    92622 2ja6:B (4.0) BS02 dna 2.7.7.6 GO:0001172 ... P08518 17290000
    92623 2ja6:B (4.0) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 17290000
    92624 2ja6:C (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 17290000
    92625 2ja6:I (4.0) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 17290000
    92626 2ja6:J (4.0) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 17290000
    92627 2ja6:L (4.0) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 17290000
    92628 2ja7:A (3.8) BS01 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92629 2ja7:A (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P04050 17290000
    92630 2ja7:A (3.8) BS03 MG 2.7.7.6 GO:0001172 ... P04050 17290000
    92631 2ja7:A (3.8) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 17290000
    92632 2ja7:B (3.8) BS01 dna 2.7.7.6 GO:0001172 ... P08518 17290000
    92633 2ja7:B (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P08518 17290000
    92634 2ja7:B (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 17290000
    92635 2ja7:C (3.8) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 17290000
    92636 2ja7:I (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 17290000
    92637 2ja7:I (3.8) BS02 ZN 2.7.7.6 GO:0001172 ... P27999 17290000
    92638 2ja7:J (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 17290000
    92639 2ja7:L (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 17290000
    92640 2ja7:M (3.8) BS01 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92641 2ja7:M (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P04050 17290000
    92642 2ja7:M (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 17290000
    92643 2ja7:M (3.8) BS04 MG 2.7.7.6 GO:0001172 ... P04050 17290000
    92644 2ja7:N (3.8) BS01 dna 2.7.7.6 GO:0001172 ... P08518 17290000
    92645 2ja7:N (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P08518 17290000
    92646 2ja7:N (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 17290000
    92647 2ja7:O (3.8) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 17290000
    92648 2ja7:U (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 17290000
    92649 2ja7:V (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 17290000
    92650 2ja7:X (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 17290000
    92651 2ja8:A (3.8) BS01 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92652 2ja8:A (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P04050 17290000
    92653 2ja8:A (3.8) BS03 dna 2.7.7.6 GO:0001172 ... P04050 17290000
    92654 2ja8:A (3.8) BS04 MG 2.7.7.6 GO:0001172 ... P04050 17290000
    92655 2ja8:A (3.8) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 17290000
    92656 2ja8:B (3.8) BS01 rna 2.7.7.6 GO:0001172 ... P08518 17290000
    92657 2ja8:B (3.8) BS02 dna 2.7.7.6 GO:0001172 ... P08518 17290000
    92658 2ja8:B (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 17290000
    92659 2ja8:C (3.8) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 17290000
    92660 2ja8:I (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 17290000
    92661 2ja8:J (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 17290000
    92662 2ja8:L (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 17290000
    92663 2jac:A (2.02) BS01 GSH 1.11.1.9
    2.5.1.18
    GO:0004364 ... P25373 17327665
    92664 2jae:A (1.25) BS01 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92665 2jae:B (1.25) BS01 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92666 2jaf:A (1.7) BS01 CL ? GO:0005216 ... B0R2U4 17117890
    92667 2jaf:A (1.7) BS02 CL ? GO:0005216 ... B0R2U4 17117890
    92668 2jaf:A (1.7) BS03 RET ? GO:0005216 ... B0R2U4 17117890
    92669 2jag:A (1.93) BS01 CL ? GO:0005216 ... B0R2U4 17117890
    92670 2jag:A (1.93) BS02 CL ? GO:0005216 ... B0R2U4 17117890
    92671 2jag:A (1.93) BS03 RET ? GO:0005216 ... B0R2U4 17117890
    92672 2jah:A (1.8) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92673 2jah:B (1.8) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92674 2jah:C (1.8) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92675 2jah:D (1.8) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92676 2jai:A (2.3) BS01 CIR 3.5.3.18 GO:0003073 ... O94760 17273169 BindingDB: Ki=3.700e+6nM
    92677 2jaj:A (2.0) BS01 D20 3.5.3.18 GO:0003073 ... O94760 17273169 MOAD: ic50<25uM
    BindingDB: Ki=13000nM, IC50=29000nM
    92678 2jaj:B (2.0) BS01 D20 3.5.3.18 GO:0003073 ... O94760 17273169 MOAD: ic50<25uM
    BindingDB: Ki=13000nM, IC50=29000nM
    92679 2jal:A (1.9) BS01 YLL 3.2.1.21 GO:0004553 ... Q08638 17252125
    92680 2jal:B (1.9) BS01 YLL 3.2.1.21 GO:0004553 ... Q08638 17252125
    92681 2jal:B (1.9) BS02 CA 3.2.1.21 GO:0004553 ... Q08638 17252125
    92682 2jam:A (1.7) BS01 peptide 2.7.11.17 GO:0004672 ... Q96NX5 N/A
    92683 2jam:A (1.7) BS02 J60 2.7.11.17 GO:0004672 ... Q96NX5 N/A
    92684 2jam:A (1.7) BS03 CA 2.7.11.17 GO:0004672 ... Q96NX5 N/A
    92685 2jam:B (1.7) BS01 peptide 2.7.11.17 GO:0004672 ... Q96NX5 N/A
    92686 2jam:B (1.7) BS02 J60 2.7.11.17 GO:0004672 ... Q96NX5 N/A
    92687 2jao:A (2.0) BS01 DGP 3.1.3.- GO:0005634 ... Q9JM14 17985935
    92688 2jao:A (2.0) BS02 MG 3.1.3.- GO:0005634 ... Q9JM14 17985935
    92689 2jap:A (2.1) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92690 2jap:A (2.1) BS02 J01 ? GO:0016616 ... Q9LCV7 17279617
    92691 2jap:B (2.1) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92692 2jap:B (2.1) BS02 J01 ? GO:0016616 ... Q9LCV7 17279617
    92693 2jap:C (2.1) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92694 2jap:C (2.1) BS02 J01 ? GO:0016616 ... Q9LCV7 17279617
    92695 2jap:D (2.1) BS01 NDP ? GO:0016616 ... Q9LCV7 17279617
    92696 2jap:D (2.1) BS02 J01 ? GO:0016616 ... Q9LCV7 17279617
    92697 2jaq:A (2.3) BS01 DCP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92698 2jaq:B (2.3) BS01 DCP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92699 2jar:A (1.94) BS01 UMP 3.1.3.- GO:0005634 ... Q9JM14 17985935
    92700 2jar:A (1.94) BS02 MG 3.1.3.- GO:0005634 ... Q9JM14 17985935
    92701 2jas:A (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92702 2jas:B (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92703 2jas:C (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92704 2jas:D (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92705 2jas:E (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92706 2jas:F (2.7) BS01 DTP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92707 2jat:A (2.6) BS01 POP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92708 2jat:A (2.6) BS02 DCM 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92709 2jat:B (2.6) BS01 POP 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92710 2jat:B (2.6) BS02 DCM 2.7.1.113 GO:0004138 ... Q93IG4 17229440
    92711 2jau:A (1.8) BS01 MG 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92712 2jau:A (1.8) BS02 PO4 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92713 2jau:A (1.8) BS03 ATM 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92714 2jau:A (1.8) BS04 MG 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92715 2jav:A (2.2) BS01 5Z5 2.7.11.1 GO:0004672 ... P51955 17197699 MOAD: ic50~8uM
    92716 2jaw:A (1.95) BS01 BVP 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92717 2jaw:A (1.95) BS02 MG 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92718 2jaw:A (1.95) BS03 MG 3.1.3.- GO:0008253 ... Q9NPB1 17985935
    92719 2jax:A (3.22) BS01 ATP ? GO:0001666 ... P9WFD7 N/A
    92720 2jax:A (3.22) BS02 ATP ? GO:0001666 ... P9WFD7 N/A
    92721 2jaz:B (2.03) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 17368670
    92722 2jaz:B (2.03) BS02 PO4 3.1.-.- GO:0004519 ... Q47112 17368670
    92723 2jaz:D (2.03) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 17368670
    92724 2jaz:D (2.03) BS02 PO4 3.1.-.- GO:0004519 ... Q47112 17368670
    92725 2jb0:B (1.91) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 17368670
    92726 2jb1:A (1.55) BS01 ALA 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92727 2jb1:A (1.55) BS02 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92728 2jb1:B (1.55) BS01 ALA 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92729 2jb1:B (1.55) BS02 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92730 2jb2:A (1.45) BS01 PHE 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92731 2jb2:A (1.45) BS02 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92732 2jb2:B (1.45) BS01 PHE 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92733 2jb2:B (1.45) BS02 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92734 2jb3:A (1.85) BS01 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92735 2jb3:A (1.85) BS02 BE2 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92736 2jb3:B (1.85) BS01 FAD 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92737 2jb3:B (1.85) BS02 BE2 1.4.3.2 GO:0001716 ... Q8VPD4 17234209
    92738 2jb4:A (1.3) BS01 A14 1.21.3.1 GO:0005506 ... P05326 17907118
    92739 2jb4:A (1.3) BS02 FE 1.21.3.1 GO:0005506 ... P05326 17907118
    92740 2jb5:H (2.8) BS01 T5C N/A N/A P01857 18241888
    92741 2jb5:L (2.8) BS01 T5C ? GO:0003823 ... P0DOY2 18241888
    92742 2jb6:A (2.85) BS01 T5C ? GO:0003823 ... P0DOY2 18241888
    92743 2jb6:B (2.85) BS01 T5C N/A N/A P01857 18241888
    92744 2jb6:H (2.85) BS01 T5C N/A N/A P01857 18241888
    92745 2jb6:L (2.85) BS01 T5C ? GO:0003823 ... P0DOY2 18241888
    92746 2jb6:L (2.85) BS02 T5C ? GO:0003823 ... P0DOY2 18241888
    92747 2jb7:A (1.65) BS01 AMP ? N/A Q8ZVF7 N/A
    92748 2jb7:A (1.65) BS02 AMP ? N/A Q8ZVF7 N/A
    92749 2jb7:B (1.65) BS01 AMP ? N/A Q8ZVF7 N/A
    92750 2jb7:B (1.65) BS02 AMP ? N/A Q8ZVF7 N/A
    92751 2jb7:C (1.65) BS01 AMP ? N/A Q8ZVF7 N/A
    92752 2jb7:C (1.65) BS02 AMP ? N/A Q8ZVF7 N/A
    92753 2jb8:A (1.53) BS01 FE 1.14.20.1 GO:0005506 ... P18548 N/A
    92754 2jb8:A (1.53) BS02 HKV 1.14.20.1 GO:0005506 ... P18548 N/A
    92755 2jbf:A (1.7) BS01 PNM 3.4.16.4 GO:0008800 ... Q8DH45 19100272
    92756 2jbf:B (1.7) BS01 PNM 3.4.16.4 GO:0008800 ... Q8DH45 19100272
    92757 2jbf:C (1.7) BS01 PNM 3.4.16.4 GO:0008800 ... Q8DH45 19100272
    92758 2jbf:D (1.7) BS01 PNM 3.4.16.4 GO:0008800 ... Q8DH45 19100272
    92759 2jbg:B (2.2) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 17368670
    92760 2jbg:D (2.2) BS01 ZN 3.1.-.- GO:0004519 ... Q47112 17368670
    92761 2jbh:A (1.7) BS01 PO4 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92762 2jbh:A (1.7) BS02 CA 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92763 2jbh:A (1.7) BS03 5GP 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92764 2jbh:B (1.7) BS01 PO4 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92765 2jbh:B (1.7) BS02 CA 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92766 2jbh:B (1.7) BS03 5GP 2.4.2.8 GO:0000287 ... Q9NRG1 21054786
    92767 2jbj:A (2.19) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 17372356
    92768 2jbj:A (2.19) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 17372356
    92769 2jbj:A (2.19) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 17372356
    92770 2jbj:A (2.19) BS04 G88 3.4.17.21 GO:0004180 ... Q04609 17372356 MOAD: Ki=0.2nM
    BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM, EC50=0.620000nM
    92771 2jbk:A (2.99) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 17372356
    92772 2jbk:A (2.99) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 17372356
    92773 2jbk:A (2.99) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 17372356
    92774 2jbk:A (2.99) BS04 QUS 3.4.17.21 GO:0004180 ... Q04609 17372356
    92775 2jbl:C (2.4) BS01 HEC ? GO:0005506 ... P07173 17337272
    92776 2jbl:C (2.4) BS02 HEC ? GO:0005506 ... P07173 17337272
    92777 2jbl:C (2.4) BS03 HEC ? GO:0005506 ... P07173 17337272
    92778 2jbl:C (2.4) BS04 HEC ? GO:0005506 ... P07173 17337272
    92779 2jbl:L (2.4) BS01 BCB ? GO:0009772 ... P06009 17337272
    92780 2jbl:L (2.4) BS02 BCB ? GO:0009772 ... P06009 17337272
    92781 2jbl:L (2.4) BS03 BPB ? GO:0009772 ... P06009 17337272
    92782 2jbl:L (2.4) BS04 SMA ? GO:0009772 ... P06009 17337272
    92783 2jbl:L (2.4) BS05 BCB ? GO:0009772 ... P06009 17337272
    92784 2jbl:L (2.4) BS06 BPB ? GO:0009772 ... P06009 17337272
    92785 2jbl:L (2.4) BS07 FE ? GO:0009772 ... P06009 17337272
    92786 2jbl:L (2.4) BS08 MQ7 ? GO:0009772 ... P06009 17337272
    92787 2jbl:M (2.4) BS01 BCB ? GO:0009772 ... P06010 17337272
    92788 2jbl:M (2.4) BS02 BPB ? GO:0009772 ... P06010 17337272
    92789 2jbl:M (2.4) BS03 BCB ? GO:0009772 ... P06010 17337272
    92790 2jbl:M (2.4) BS04 BCB ? GO:0009772 ... P06010 17337272
    92791 2jbl:M (2.4) BS05 BPB ? GO:0009772 ... P06010 17337272
    92792 2jbl:M (2.4) BS06 FE ? GO:0009772 ... P06010 17337272
    92793 2jbl:M (2.4) BS07 MQ7 ? GO:0009772 ... P06010 17337272
    92794 2jbl:M (2.4) BS08 NS5 ? GO:0009772 ... P06010 17337272
    92795 2jbo:A (3.1) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    92796 2jbp:A (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    92797 2jbp:B (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    92798 2jbp:C (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    92799 2jbp:D (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    92800 2jbp:E (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).