SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    928001 8z3s:C (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    928002 8z3s:C (3.9) BS02 CA N/A GO:0001666 ... Q12791 39089879
    928003 8z3s:C (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    928004 8z3s:D (3.9) BS01 A1L04 N/A GO:0001666 ... Q12791 39089879
    928005 8z3s:D (3.9) BS02 Y01 N/A GO:0001666 ... Q12791 39089879
    928006 8z3s:D (3.9) BS03 CA N/A GO:0001666 ... Q12791 39089879
    928007 8z3s:D (3.9) BS04 CA N/A GO:0001666 ... Q12791 39089879
    928008 8z3t:A (2.01) BS01 peptide N/A N/A A0A1V0G0J3 N/A
    928009 8z3t:A (2.01) BS02 peptide N/A N/A A0A1V0G0J3 N/A
    928010 8z3t:B (2.01) BS01 peptide N/A N/A A0A1V0G0J3 N/A
    928011 8z3t:B (2.01) BS02 peptide N/A N/A A0A1V0G0J3 N/A
    928012 8z3t:C (2.01) BS01 peptide N/A N/A A0A1V0G0J3 N/A
    928013 8z3t:C (2.01) BS02 peptide N/A N/A A0A1V0G0J3 N/A
    928014 8z3x:A (1.95) BS01 FAD N/A N/A A8J8W0 40378212
    928015 8z41:A (1.95) BS01 FAD N/A N/A A8J8W0 40378212
    928016 8z44:A (2.0) BS01 FAD N/A N/A A8J8W0 40378212
    928017 8z45:A (2.0) BS01 FAD N/A N/A A8J8W0 40378212
    928018 8z46:A (1.57) BS01 A1D70 N/A GO:0008233 ... P0DTC1 39574309
    928019 8z47:A (1.86) BS01 GLA N/A GO:0004553 ... D6CYU7 39820076
    928020 8z48:A (1.94) BS01 MBG N/A GO:0004553 ... D6CYU7 39820076
    928021 8z48:B (1.94) BS01 MBG N/A GO:0004553 ... D6CYU7 39820076
    928022 8z48:C (1.94) BS01 MBG N/A GO:0004553 ... D6CYU7 39820076
    928023 8z48:D (1.94) BS01 MBG N/A GO:0004553 ... D6CYU7 39820076
    928024 8z4b:B (2.5) BS01 peptide ? GO:0005179 ... P01308 40257998
    928025 8z4b:D (2.5) BS01 peptide ? GO:0005179 ... P01308 40257998
    928026 8z4e:A (3.0) BS01 CA N/A GO:0004308 ... A0A884WLQ3 39402031
    928027 8z4i:A (2.8) BS01 rna N/A N/A N/A 41569151
    928028 8z4i:A (2.8) BS02 CA N/A N/A N/A 41569151
    928029 8z4i:A (2.8) BS03 CA N/A N/A N/A 41569151
    928030 8z4i:A (2.8) BS04 CA N/A N/A N/A 41569151
    928031 8z4i:B (2.8) BS01 rna N/A N/A N/A 41569151
    928032 8z4i:B (2.8) BS02 CA N/A N/A N/A 41569151
    928033 8z4j:B (2.97) BS01 rna N/A N/A N/A 39143216
    928034 8z4j:B (2.97) BS02 ZN N/A N/A N/A 39143216
    928035 8z4j:C (2.97) BS01 rna N/A N/A N/A 39143216
    928036 8z4j:C (2.97) BS02 rna N/A N/A N/A 39143216
    928037 8z4j:C (2.97) BS03 ZN N/A N/A N/A 39143216
    928038 8z4j:D (2.97) BS01 rna N/A N/A N/A 39143216
    928039 8z4j:D (2.97) BS02 rna N/A N/A N/A 39143216
    928040 8z4j:D (2.97) BS03 ZN N/A N/A N/A 39143216
    928041 8z4j:E (2.97) BS01 rna N/A N/A N/A 39143216
    928042 8z4j:E (2.97) BS02 rna N/A N/A N/A 39143216
    928043 8z4j:E (2.97) BS03 ZN N/A N/A N/A 39143216
    928044 8z4j:F (2.97) BS01 rna N/A N/A N/A 39143216
    928045 8z4j:F (2.97) BS02 rna N/A N/A N/A 39143216
    928046 8z4j:G (2.97) BS01 rna N/A N/A N/A 39143216
    928047 8z4j:H (2.97) BS01 rna N/A N/A N/A 39143216
    928048 8z4j:H (2.97) BS02 ZN N/A N/A N/A 39143216
    928049 8z4j:I (2.97) BS01 rna N/A N/A N/A 39143216
    928050 8z4j:J (2.97) BS01 rna N/A N/A N/A 39143216
    928051 8z4j:J (2.97) BS02 rna N/A N/A N/A 39143216
    928052 8z4j:K (2.97) BS01 rna N/A N/A N/A 39143216
    928053 8z4j:L (2.97) BS01 rna N/A N/A N/A 39143216
    928054 8z4k:A (2.0) BS01 FAD N/A N/A A8J8W0 40378212
    928055 8z4l:A (2.85) BS01 rna N/A N/A N/A 39143216
    928056 8z4l:A (2.85) BS02 rna N/A N/A N/A 39143216
    928057 8z4l:A (2.85) BS03 ZN N/A N/A N/A 39143216
    928058 8z4l:B (2.85) BS01 rna N/A N/A N/A 39143216
    928059 8z4l:B (2.85) BS02 rna N/A N/A N/A 39143216
    928060 8z4l:B (2.85) BS03 ZN N/A N/A N/A 39143216
    928061 8z4l:C (2.85) BS01 rna N/A N/A N/A 39143216
    928062 8z4l:C (2.85) BS02 rna N/A N/A N/A 39143216
    928063 8z4l:C (2.85) BS03 ZN N/A N/A N/A 39143216
    928064 8z4l:D (2.85) BS01 rna N/A N/A N/A 39143216
    928065 8z4l:D (2.85) BS02 rna N/A N/A N/A 39143216
    928066 8z4l:E (2.85) BS01 rna N/A N/A N/A 39143216
    928067 8z4l:E (2.85) BS02 rna N/A N/A N/A 39143216
    928068 8z4l:E (2.85) BS03 ZN N/A N/A N/A 39143216
    928069 8z4l:F (2.85) BS01 rna N/A N/A N/A 39143216
    928070 8z4l:F (2.85) BS02 rna N/A N/A N/A 39143216
    928071 8z4l:F (2.85) BS03 ZN N/A N/A N/A 39143216
    928072 8z4l:G (2.85) BS01 rna N/A N/A N/A 39143216
    928073 8z4l:G (2.85) BS02 ZN N/A N/A N/A 39143216
    928074 8z4l:H (2.85) BS01 rna N/A N/A N/A 39143216
    928075 8z4l:H (2.85) BS02 ZN N/A N/A N/A 39143216
    928076 8z4l:I (2.85) BS01 rna N/A N/A N/A 39143216
    928077 8z4l:J (2.85) BS01 rna N/A N/A N/A 39143216
    928078 8z4l:J (2.85) BS02 rna N/A N/A N/A 39143216
    928079 8z4l:J (2.85) BS03 ZN N/A N/A N/A 39143216
    928080 8z4l:K (2.85) BS01 rna N/A N/A N/A 39143216
    928081 8z4l:L (2.85) BS01 rna N/A N/A N/A 39143216
    928082 8z4m:A (1.9) BS01 FAD N/A N/A A8J8W0 40378212
    928083 8z4p:A (2.05) BS01 FAD N/A N/A A8J8W0 40378212
    928084 8z4q:A (1.68) BS01 FE N/A GO:0016491 ... A0A1V6NH53 39227380
    928085 8z4r:A (1.81) BS01 A1D7Y N/A GO:0016491 ... N/A 39227380
    928086 8z4r:A (1.81) BS02 FE N/A GO:0016491 ... N/A 39227380
    928087 8z4s:A (1.93) BS01 A1D7Z N/A GO:0016491 ... N/A 39227380
    928088 8z4s:A (1.93) BS02 FE N/A GO:0016491 ... N/A 39227380
    928089 8z4u:A (2.0) BS01 FAD N/A N/A A8J8W0 40378212
    928090 8z4v:A (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928091 8z4v:A (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928092 8z4v:A (1.7) BS03 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928093 8z4v:A (1.7) BS04 BCL N/A GO:0005886 ... W8KQR0 39694041
    928094 8z4v:A (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928095 8z4v:C (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928096 8z4v:C (1.7) BS02 BCL N/A GO:0005886 ... W8KE12 39694041
    928097 8z4v:C (1.7) BS03 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928098 8z4v:C (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928099 8z4v:C (1.7) BS05 BCL N/A GO:0005886 ... W8KE12 39694041
    928100 8z4v:C (1.7) BS06 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928101 8z4v:D (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928102 8z4v:D (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928103 8z4v:D (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928104 8z4v:D (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928105 8z4v:D (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928106 8z4v:E (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928107 8z4v:E (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928108 8z4v:E (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928109 8z4v:E (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928110 8z4v:E (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928111 8z4v:E (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928112 8z4v:G (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928113 8z4v:G (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928114 8z4v:G (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928115 8z4v:G (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928116 8z4v:G (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928117 8z4v:H (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928118 8z4v:H (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928119 8z4v:H (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928120 8z4v:H (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928121 8z4v:H (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928122 8z4v:H (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928123 8z4v:J (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928124 8z4v:J (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928125 8z4v:J (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928126 8z4v:J (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928127 8z4v:J (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928128 8z4v:K (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928129 8z4v:K (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928130 8z4v:K (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928131 8z4v:K (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928132 8z4v:K (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928133 8z4v:K (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928134 8z4v:M (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928135 8z4v:M (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928136 8z4v:M (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928137 8z4v:M (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928138 8z4v:M (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928139 8z4v:N (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928140 8z4v:N (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928141 8z4v:N (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928142 8z4v:N (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928143 8z4v:N (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928144 8z4v:N (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928145 8z4v:P (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928146 8z4v:P (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928147 8z4v:P (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928148 8z4v:P (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928149 8z4v:P (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928150 8z4v:Q (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928151 8z4v:Q (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928152 8z4v:Q (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928153 8z4v:Q (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928154 8z4v:Q (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928155 8z4v:Q (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928156 8z4v:S (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928157 8z4v:S (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928158 8z4v:S (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928159 8z4v:S (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928160 8z4v:S (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928161 8z4v:T (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928162 8z4v:T (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928163 8z4v:T (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928164 8z4v:T (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928165 8z4v:T (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928166 8z4v:T (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928167 8z4v:V (1.7) BS01 BCL N/A GO:0005886 ... W8KQR0 39694041
    928168 8z4v:V (1.7) BS02 BCL N/A GO:0005886 ... W8KQR0 39694041
    928169 8z4v:V (1.7) BS03 BCL N/A GO:0005886 ... W8KQR0 39694041
    928170 8z4v:V (1.7) BS04 A1L0S N/A GO:0005886 ... W8KQR0 39694041
    928171 8z4v:V (1.7) BS05 BCL N/A GO:0005886 ... W8KQR0 39694041
    928172 8z4v:W (1.7) BS01 BCL N/A GO:0005886 ... W8KE12 39694041
    928173 8z4v:W (1.7) BS02 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928174 8z4v:W (1.7) BS03 BCL N/A GO:0005886 ... W8KE12 39694041
    928175 8z4v:W (1.7) BS04 BCL N/A GO:0005886 ... W8KE12 39694041
    928176 8z4v:W (1.7) BS05 A1L0S N/A GO:0005886 ... W8KE12 39694041
    928177 8z4v:W (1.7) BS06 BCL N/A GO:0005886 ... W8KE12 39694041
    928178 8z4w:A (2.33) BS01 A1D7X N/A GO:0006508 ... P0DTC1 39574309
    928179 8z4w:A (2.33) BS02 ZN N/A GO:0006508 ... P0DTC1 39574309
    928180 8z4w:B (2.33) BS01 A1D7X N/A GO:0006508 ... P0DTC1 39574309
    928181 8z4w:B (2.33) BS02 ZN N/A GO:0006508 ... P0DTC1 39574309
    928182 8z4w:B (2.33) BS03 A1D7X N/A GO:0006508 ... P0DTC1 39574309
    928183 8z4w:C (2.33) BS01 A1D7X N/A GO:0006508 ... P0DTC1 39574309
    928184 8z4w:C (2.33) BS02 ZN N/A GO:0006508 ... P0DTC1 39574309
    928185 8z4w:D (2.33) BS01 A1D7X N/A GO:0006508 ... P0DTC1 39574309
    928186 8z4w:D (2.33) BS02 ZN N/A GO:0006508 ... P0DTC1 39574309
    928187 8z51:A (1.5) BS01 34G N/A GO:0003796 ... P00698 N/A
    928188 8z52:A (1.48) BS01 TEP N/A GO:0003796 ... P00698 N/A
    928189 8z53:A (2.4) BS01 A1L1M N/A GO:0005515 ... Q9SQR3 41038837
    928190 8z53:B (2.4) BS01 A1L1M N/A GO:0005515 ... Q9SQR3 41038837
    928191 8z54:A (1.45) BS01 peptide N/A GO:0036054 ... Q9NXA8 39031546
    928192 8z54:A (1.45) BS02 ZN N/A GO:0036054 ... Q9NXA8 39031546
    928193 8z55:A (1.83) BS01 peptide N/A GO:0036054 ... Q9NXA8 39031546
    928194 8z55:A (1.83) BS02 ADP N/A GO:0036054 ... Q9NXA8 39031546
    928195 8z55:A (1.83) BS03 ZN N/A GO:0036054 ... Q9NXA8 39031546
    928196 8z56:A (1.806) BS01 peptide N/A GO:0036054 ... Q9NXA8 39031546
    928197 8z56:A (1.806) BS02 ZN N/A GO:0036054 ... Q9NXA8 39031546
    928198 8z57:A (1.96) BS01 peptide N/A GO:0036054 ... Q9NXA8 39031546
    928199 8z57:A (1.96) BS02 ZN N/A GO:0036054 ... Q9NXA8 39031546
    928200 8z57:A (1.96) BS03 ADP N/A GO:0036054 ... Q9NXA8 39031546

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).