SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    928601 8z6y:A (2.87) BS02 ZN N/A GO:0004022 ... A0A562IS02 N/A
    928602 8z6y:A (2.87) BS03 ZN N/A GO:0004022 ... A0A562IS02 N/A
    928603 8z6z:A (2.59) BS01 NAD N/A GO:0004022 ... A0A562IS02 N/A
    928604 8z6z:A (2.59) BS02 ZN N/A GO:0004022 ... A0A562IS02 N/A
    928605 8z6z:A (2.59) BS03 ZN N/A GO:0004022 ... A0A562IS02 N/A
    928606 8z70:D (3.2) BS01 rna N/A GO:0002181 ... P0CX45 39789210
    928607 8z70:D (3.2) BS02 rna N/A GO:0002181 ... P0CX45 39789210
    928608 8z70:E (3.2) BS01 rna N/A GO:0000027 ... P14126 39789210
    928609 8z70:F (3.2) BS01 rna N/A GO:0002181 ... P10664 39789210
    928610 8z70:F (3.2) BS02 rna N/A GO:0002181 ... P10664 39789210
    928611 8z70:G (3.2) BS01 rna N/A GO:0000027 ... P26321 39789210
    928612 8z70:G (3.2) BS02 rna N/A GO:0000027 ... P26321 39789210
    928613 8z70:H (3.2) BS01 rna N/A GO:0000027 ... P05739 39789210
    928614 8z70:I (3.2) BS01 rna N/A GO:0000463 ... P05737 39789210
    928615 8z70:I (3.2) BS02 rna N/A GO:0000463 ... P05737 39789210
    928616 8z70:J (3.2) BS01 rna N/A GO:0000470 ... P17076 39789210
    928617 8z70:J (3.2) BS02 rna N/A GO:0000470 ... P17076 39789210
    928618 8z70:K (3.2) BS01 rna N/A GO:0002181 ... P05738 39789210
    928619 8z70:L (3.2) BS01 rna N/A GO:0000027 ... P41805 39789210
    928620 8z70:L (3.2) BS02 rna N/A GO:0000027 ... P41805 39789210
    928621 8z70:L (3.2) BS03 rna N/A GO:0000027 ... P41805 39789210
    928622 8z70:M (3.2) BS01 rna N/A GO:0000027 ... Q3E757 39789210
    928623 8z70:M (3.2) BS02 rna N/A GO:0000027 ... Q3E757 39789210
    928624 8z70:M (3.2) BS03 rna N/A GO:0000027 ... Q3E757 39789210
    928625 8z70:N (3.2) BS01 rna N/A GO:0002181 ... Q12690 39789210
    928626 8z70:O (3.2) BS01 rna N/A GO:0000027 ... P36105 39789210
    928627 8z70:P (3.2) BS01 rna N/A GO:0000470 ... P05748 39789210
    928628 8z70:P (3.2) BS02 rna N/A GO:0000470 ... P05748 39789210
    928629 8z70:Q (3.2) BS01 rna N/A GO:0000470 ... P26784 39789210
    928630 8z70:R (3.2) BS01 rna N/A GO:0000448 ... P05740 39789210
    928631 8z70:R (3.2) BS02 rna N/A GO:0000448 ... P05740 39789210
    928632 8z70:S (3.2) BS01 rna N/A GO:0002181 ... P0CX49 39789210
    928633 8z70:SA (3.2) BS01 rna N/A GO:0000054 ... P05750 39789210
    928634 8z70:SB (3.2) BS01 rna N/A GO:0000054 ... P26783 39789210
    928635 8z70:SC (3.2) BS01 rna N/A N/A Q08745 39789210
    928636 8z70:SD (3.2) BS01 rna N/A GO:0003735 ... P48589 39789210
    928637 8z70:SE (3.2) BS01 rna N/A GO:0003723 ... Q01855 39789210
    928638 8z70:SF (3.2) BS01 rna N/A GO:0000462 ... P0CX51 39789210
    928639 8z70:SG (3.2) BS01 rna N/A GO:0003735 ... P02407 39789210
    928640 8z70:SH (3.2) BS01 rna N/A GO:0000054 ... P0CX55 39789210
    928641 8z70:SI (3.2) BS01 rna N/A GO:0000054 ... P07280 39789210
    928642 8z70:SJ (3.2) BS01 rna N/A GO:0003723 ... P38701 39789210
    928643 8z70:SK (3.2) BS01 rna N/A GO:0002181 ... Q3E792 39789210
    928644 8z70:SK (3.2) BS02 rna N/A GO:0002181 ... Q3E792 39789210
    928645 8z70:SL (3.2) BS01 rna N/A GO:0000028 ... Q3E7X9 39789210
    928646 8z70:SM (3.2) BS01 rna N/A GO:0002181 ... P41057 39789210
    928647 8z70:SN (3.2) BS01 rna N/A GO:0003735 ... P05759 39789210
    928648 8z70:SO (3.2) BS01 rna N/A GO:0001965 ... P38011 39789210
    928649 8z70:SP (3.2) BS01 rna N/A GO:0003735 ... P32905 39789210
    928650 8z70:SQ (3.2) BS01 rna N/A GO:0000462 ... P33442 39789210
    928651 8z70:SR (3.2) BS01 rna N/A GO:0003723 ... P25443 39789210
    928652 8z70:SS (3.2) BS01 rna N/A GO:0002181 ... P0CX35 39789210
    928653 8z70:ST (3.2) BS01 rna N/A GO:0000462 ... P0CX37 39789210
    928654 8z70:SU (3.2) BS01 rna N/A GO:0002181 ... P26786 39789210
    928655 8z70:SV (3.2) BS01 rna N/A GO:0000462 ... P0CX39 39789210
    928656 8z70:SV (3.2) BS02 rna N/A GO:0000462 ... P0CX39 39789210
    928657 8z70:SW (3.2) BS01 rna N/A GO:0000462 ... O13516 39789210
    928658 8z70:SX (3.2) BS01 rna N/A GO:0000028 ... P0CX47 39789210
    928659 8z70:SY (3.2) BS01 rna N/A GO:0000462 ... P05756 39789210
    928660 8z70:SY (3.2) BS02 rna N/A GO:0000462 ... P05756 39789210
    928661 8z70:SZ (3.2) BS01 rna N/A GO:0000028 ... P39516 39789210
    928662 8z70:Sb (3.2) BS01 rna N/A GO:0002181 ... P0C0W1 39789210
    928663 8z70:Sc (3.2) BS01 rna N/A GO:0000462 ... P0CX29 39789210
    928664 8z70:Sd (3.2) BS01 rna N/A GO:0000462 ... P0CX31 39789210
    928665 8z70:Se (3.2) BS01 rna N/A GO:0003735 ... P39938 39789210
    928666 8z70:Sf (3.2) BS01 rna N/A GO:0000028 ... P35997 39789210
    928667 8z70:Sg (3.2) BS01 rna N/A GO:0002181 ... P0CX33 39789210
    928668 8z70:T (3.2) BS01 rna N/A GO:0002181 ... P0CX82 39789210
    928669 8z70:T (3.2) BS02 rna N/A GO:0002181 ... P0CX82 39789210
    928670 8z70:U (3.2) BS01 rna N/A GO:0002181 ... P0CX23 39789210
    928671 8z70:U (3.2) BS02 rna N/A GO:0002181 ... P0CX23 39789210
    928672 8z70:V (3.2) BS01 rna N/A GO:0002181 ... Q02753 39789210
    928673 8z70:V (3.2) BS02 rna N/A GO:0002181 ... Q02753 39789210
    928674 8z70:W (3.2) BS01 rna N/A GO:0003735 ... P05749 39789210
    928675 8z70:X (3.2) BS01 rna N/A GO:0002181 ... P0CX41 39789210
    928676 8z70:Y (3.2) BS01 rna N/A GO:0003735 ... P04449 39789210
    928677 8z70:Z (3.2) BS01 rna N/A GO:0003735 ... P04456 39789210
    928678 8z70:Z (3.2) BS02 rna N/A GO:0003735 ... P04456 39789210
    928679 8z70:a (3.2) BS01 rna N/A GO:0002181 ... P05743 39789210
    928680 8z70:a (3.2) BS02 rna N/A GO:0002181 ... P05743 39789210
    928681 8z70:b (3.2) BS01 rna N/A GO:0002181 ... P0C2H6 39789210
    928682 8z70:c (3.2) BS01 rna N/A GO:0002181 ... P02406 39789210
    928683 8z70:d (3.2) BS01 rna N/A GO:0002181 ... P05747 39789210
    928684 8z70:e (3.2) BS01 rna N/A GO:0002181 ... P14120 39789210
    928685 8z70:f (3.2) BS01 rna N/A GO:0002181 ... P0C2H8 39789210
    928686 8z70:g (3.2) BS01 rna N/A GO:0002181 ... P38061 39789210
    928687 8z70:h (3.2) BS01 rna N/A GO:0000027 ... P05744 39789210
    928688 8z70:i (3.2) BS01 rna N/A GO:0002181 ... P87262 39789210
    928689 8z70:j (3.2) BS01 rna N/A GO:0000463 ... P0CX84 39789210
    928690 8z70:j (3.2) BS02 rna N/A GO:0000463 ... P0CX84 39789210
    928691 8z70:k (3.2) BS01 rna N/A GO:0000470 ... P05745 39789210
    928692 8z70:l (3.2) BS01 rna N/A GO:0000448 ... P49166 39789210
    928693 8z70:l (3.2) BS02 rna N/A GO:0000448 ... P49166 39789210
    928694 8z70:m (3.2) BS01 rna N/A GO:0002181 ... P49167 39789210
    928695 8z70:n (3.2) BS01 rna N/A GO:0002181 ... P04650 39789210
    928696 8z70:n (3.2) BS02 rna N/A GO:0002181 ... P04650 39789210
    928697 8z70:o (3.2) BS01 rna N/A GO:0003735 ... P0CH08 39789210
    928698 8z70:q (3.2) BS01 rna N/A GO:0002181 ... P0CX27 39789210
    928699 8z70:r (3.2) BS01 rna N/A GO:0002181 ... P0CX25 39789210
    928700 8z70:x (3.2) BS01 rna N/A GO:0003746 ... P68105 39789210
    928701 8z70:x (3.2) BS02 rna N/A GO:0003746 ... P68105 39789210
    928702 8z71:D (3.6) BS01 rna N/A GO:0002181 ... P0CX45 39789210
    928703 8z71:D (3.6) BS02 rna N/A GO:0002181 ... P0CX45 39789210
    928704 8z71:E (3.6) BS01 rna N/A GO:0000027 ... P14126 39789210
    928705 8z71:F (3.6) BS01 rna N/A GO:0002181 ... P10664 39789210
    928706 8z71:F (3.6) BS02 rna N/A GO:0002181 ... P10664 39789210
    928707 8z71:G (3.6) BS01 rna N/A GO:0000027 ... P26321 39789210
    928708 8z71:G (3.6) BS02 rna N/A GO:0000027 ... P26321 39789210
    928709 8z71:H (3.6) BS01 rna N/A GO:0000027 ... P05739 39789210
    928710 8z71:I (3.6) BS01 rna N/A GO:0000463 ... P05737 39789210
    928711 8z71:I (3.6) BS02 rna N/A GO:0000463 ... P05737 39789210
    928712 8z71:J (3.6) BS01 rna N/A GO:0000470 ... P17076 39789210
    928713 8z71:J (3.6) BS02 rna N/A GO:0000470 ... P17076 39789210
    928714 8z71:K (3.6) BS01 rna N/A GO:0002181 ... P05738 39789210
    928715 8z71:L (3.6) BS01 rna N/A GO:0000027 ... P41805 39789210
    928716 8z71:L (3.6) BS02 rna N/A GO:0000027 ... P41805 39789210
    928717 8z71:L (3.6) BS03 rna N/A GO:0000027 ... P41805 39789210
    928718 8z71:M (3.6) BS01 rna N/A GO:0000027 ... Q3E757 39789210
    928719 8z71:M (3.6) BS02 rna N/A GO:0000027 ... Q3E757 39789210
    928720 8z71:M (3.6) BS03 rna N/A GO:0000027 ... Q3E757 39789210
    928721 8z71:N (3.6) BS01 rna N/A GO:0002181 ... Q12690 39789210
    928722 8z71:O (3.6) BS01 rna N/A GO:0000027 ... P36105 39789210
    928723 8z71:P (3.6) BS01 rna N/A GO:0000470 ... P05748 39789210
    928724 8z71:P (3.6) BS02 rna N/A GO:0000470 ... P05748 39789210
    928725 8z71:Q (3.6) BS01 rna N/A GO:0000470 ... P26784 39789210
    928726 8z71:R (3.6) BS01 rna N/A GO:0000448 ... P05740 39789210
    928727 8z71:R (3.6) BS02 rna N/A GO:0000448 ... P05740 39789210
    928728 8z71:S (3.6) BS01 rna N/A GO:0002181 ... P0CX49 39789210
    928729 8z71:SA (3.6) BS01 rna N/A GO:0000054 ... P05750 39789210
    928730 8z71:SB (3.6) BS01 rna N/A GO:0000054 ... P26783 39789210
    928731 8z71:SC (3.6) BS01 rna N/A N/A Q08745 39789210
    928732 8z71:SD (3.6) BS01 rna N/A GO:0003735 ... P48589 39789210
    928733 8z71:SE (3.6) BS01 rna N/A GO:0003723 ... Q01855 39789210
    928734 8z71:SF (3.6) BS01 rna N/A GO:0000462 ... P0CX51 39789210
    928735 8z71:SG (3.6) BS01 rna N/A GO:0003735 ... P02407 39789210
    928736 8z71:SH (3.6) BS01 rna N/A GO:0000054 ... P0CX55 39789210
    928737 8z71:SI (3.6) BS01 rna N/A GO:0000054 ... P07280 39789210
    928738 8z71:SJ (3.6) BS01 rna N/A GO:0003723 ... P38701 39789210
    928739 8z71:SK (3.6) BS01 rna N/A GO:0002181 ... Q3E792 39789210
    928740 8z71:SK (3.6) BS02 rna N/A GO:0002181 ... Q3E792 39789210
    928741 8z71:SL (3.6) BS01 rna N/A GO:0000028 ... Q3E7X9 39789210
    928742 8z71:SM (3.6) BS01 rna N/A GO:0002181 ... P41057 39789210
    928743 8z71:SN (3.6) BS01 rna N/A GO:0003735 ... P05759 39789210
    928744 8z71:SO (3.6) BS01 rna N/A GO:0001965 ... P38011 39789210
    928745 8z71:SP (3.6) BS01 rna N/A GO:0003735 ... P32905 39789210
    928746 8z71:SQ (3.6) BS01 rna N/A GO:0000462 ... P33442 39789210
    928747 8z71:SR (3.6) BS01 rna N/A GO:0003723 ... P25443 39789210
    928748 8z71:SS (3.6) BS01 rna N/A GO:0002181 ... P0CX35 39789210
    928749 8z71:ST (3.6) BS01 rna N/A GO:0000462 ... P0CX37 39789210
    928750 8z71:SU (3.6) BS01 rna N/A GO:0002181 ... P26786 39789210
    928751 8z71:SV (3.6) BS01 rna N/A GO:0000462 ... P0CX39 39789210
    928752 8z71:SV (3.6) BS02 rna N/A GO:0000462 ... P0CX39 39789210
    928753 8z71:SW (3.6) BS01 rna N/A GO:0000462 ... O13516 39789210
    928754 8z71:SX (3.6) BS01 rna N/A GO:0000028 ... P0CX47 39789210
    928755 8z71:SY (3.6) BS01 rna N/A GO:0000462 ... P05756 39789210
    928756 8z71:SY (3.6) BS02 rna N/A GO:0000462 ... P05756 39789210
    928757 8z71:SZ (3.6) BS01 rna N/A GO:0000028 ... P39516 39789210
    928758 8z71:Sb (3.6) BS01 rna N/A GO:0002181 ... P0C0W1 39789210
    928759 8z71:Sc (3.6) BS01 rna N/A GO:0000462 ... P0CX29 39789210
    928760 8z71:Sd (3.6) BS01 rna N/A GO:0000462 ... P0CX31 39789210
    928761 8z71:Se (3.6) BS01 rna N/A GO:0003735 ... P39938 39789210
    928762 8z71:Sf (3.6) BS01 rna N/A GO:0000028 ... P35997 39789210
    928763 8z71:Sg (3.6) BS01 rna N/A GO:0002181 ... P0CX33 39789210
    928764 8z71:T (3.6) BS01 rna N/A GO:0002181 ... P0CX82 39789210
    928765 8z71:T (3.6) BS02 rna N/A GO:0002181 ... P0CX82 39789210
    928766 8z71:U (3.6) BS01 rna N/A GO:0002181 ... P0CX23 39789210
    928767 8z71:U (3.6) BS02 rna N/A GO:0002181 ... P0CX23 39789210
    928768 8z71:V (3.6) BS01 rna N/A GO:0002181 ... Q02753 39789210
    928769 8z71:V (3.6) BS02 rna N/A GO:0002181 ... Q02753 39789210
    928770 8z71:W (3.6) BS01 rna N/A GO:0003735 ... P05749 39789210
    928771 8z71:X (3.6) BS01 rna N/A GO:0002181 ... P0CX41 39789210
    928772 8z71:Y (3.6) BS01 rna N/A GO:0003735 ... P04449 39789210
    928773 8z71:Z (3.6) BS01 rna N/A GO:0003735 ... P04456 39789210
    928774 8z71:Z (3.6) BS02 rna N/A GO:0003735 ... P04456 39789210
    928775 8z71:a (3.6) BS01 rna N/A GO:0002181 ... P05743 39789210
    928776 8z71:a (3.6) BS02 rna N/A GO:0002181 ... P05743 39789210
    928777 8z71:b (3.6) BS01 rna N/A GO:0002181 ... P0C2H6 39789210
    928778 8z71:c (3.6) BS01 rna N/A GO:0002181 ... P02406 39789210
    928779 8z71:d (3.6) BS01 rna N/A GO:0002181 ... P05747 39789210
    928780 8z71:e (3.6) BS01 rna N/A GO:0002181 ... P14120 39789210
    928781 8z71:f (3.6) BS01 rna N/A GO:0002181 ... P0C2H8 39789210
    928782 8z71:g (3.6) BS01 rna N/A GO:0002181 ... P38061 39789210
    928783 8z71:h (3.6) BS01 rna N/A GO:0000027 ... P05744 39789210
    928784 8z71:i (3.6) BS01 rna N/A GO:0002181 ... P87262 39789210
    928785 8z71:j (3.6) BS01 rna N/A GO:0000463 ... P0CX84 39789210
    928786 8z71:j (3.6) BS02 rna N/A GO:0000463 ... P0CX84 39789210
    928787 8z71:k (3.6) BS01 rna N/A GO:0000470 ... P05745 39789210
    928788 8z71:l (3.6) BS01 rna N/A GO:0000448 ... P49166 39789210
    928789 8z71:l (3.6) BS02 rna N/A GO:0000448 ... P49166 39789210
    928790 8z71:m (3.6) BS01 rna N/A GO:0002181 ... P49167 39789210
    928791 8z71:n (3.6) BS01 rna N/A GO:0002181 ... P04650 39789210
    928792 8z71:n (3.6) BS02 rna N/A GO:0002181 ... P04650 39789210
    928793 8z71:o (3.6) BS01 rna N/A GO:0003735 ... P0CH08 39789210
    928794 8z71:q (3.6) BS01 rna N/A GO:0002181 ... P0CX27 39789210
    928795 8z71:r (3.6) BS01 rna N/A GO:0002181 ... P0CX25 39789210
    928796 8z71:v (3.6) BS01 rna N/A GO:0002182 ... P16521 39789210
    928797 8z71:x (3.6) BS01 rna N/A GO:0003746 ... P68105 39789210
    928798 8z71:x (3.6) BS02 rna N/A GO:0003746 ... P68105 39789210
    928799 8z73:A (2.906) BS01 peptide N/A N/A P42568 N/A
    928800 8z73:B (2.906) BS01 peptide N/A N/A P42568 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).