SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    929401 9dfe:1D (2.6) BS15 MG N/A GO:0002181 ... P60405 39372947
    929402 9dfe:1E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39372947
    929403 9dfe:1E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39372947
    929404 9dfe:1E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39372947
    929405 9dfe:1E (2.6) BS04 MG N/A GO:0003735 ... Q5SHN8 39372947
    929406 9dfe:1E (2.6) BS05 MG N/A GO:0003735 ... Q5SHN8 39372947
    929407 9dfe:1F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39372947
    929408 9dfe:1F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39372947
    929409 9dfe:1F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39372947
    929410 9dfe:1F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39372947
    929411 9dfe:1F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39372947
    929412 9dfe:1F (2.6) BS06 MG N/A GO:0003735 ... Q5SHN9 39372947
    929413 9dfe:1F (2.6) BS07 MG N/A GO:0003735 ... Q5SHN9 39372947
    929414 9dfe:1F (2.6) BS08 MG N/A GO:0003735 ... Q5SHN9 39372947
    929415 9dfe:1F (2.6) BS09 MG N/A GO:0003735 ... Q5SHN9 39372947
    929416 9dfe:1F (2.6) BS10 MG N/A GO:0003735 ... Q5SHN9 39372947
    929417 9dfe:1F (2.6) BS11 MG N/A GO:0003735 ... Q5SHN9 39372947
    929418 9dfe:1F (2.6) BS12 MG N/A GO:0003735 ... Q5SHN9 39372947
    929419 9dfe:1F (2.6) BS13 MG N/A GO:0003735 ... Q5SHN9 39372947
    929420 9dfe:1F (2.6) BS14 MG N/A GO:0003735 ... Q5SHN9 39372947
    929421 9dfe:1G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39372947
    929422 9dfe:1G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39372947
    929423 9dfe:1G (2.6) BS03 MG N/A GO:0000049 ... Q5SHQ0 39372947
    929424 9dfe:1G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39372947
    929425 9dfe:1G (2.6) BS05 MG N/A GO:0000049 ... Q5SHQ0 39372947
    929426 9dfe:1H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39372947
    929427 9dfe:1I (2.6) BS01 rna N/A GO:0005840 ... Q5SLQ1 39372947
    929428 9dfe:1N (2.6) BS01 rna N/A GO:0003729 ... P60488 39372947
    929429 9dfe:1N (2.6) BS02 MG N/A GO:0003729 ... P60488 39372947
    929430 9dfe:1N (2.6) BS03 MG N/A GO:0003729 ... P60488 39372947
    929431 9dfe:1O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39372947
    929432 9dfe:1O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39372947
    929433 9dfe:1P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39372947
    929434 9dfe:1P (2.6) BS02 MG N/A GO:0003735 ... Q5SHQ7 39372947
    929435 9dfe:1P (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ7 39372947
    929436 9dfe:1Q (2.6) BS01 rna N/A GO:0000049 ... P60489 39372947
    929437 9dfe:1Q (2.6) BS02 rna N/A GO:0000049 ... P60489 39372947
    929438 9dfe:1Q (2.6) BS03 MG N/A GO:0000049 ... P60489 39372947
    929439 9dfe:1Q (2.6) BS04 MG N/A GO:0000049 ... P60489 39372947
    929440 9dfe:1Q (2.6) BS05 MG N/A GO:0000049 ... P60489 39372947
    929441 9dfe:1Q (2.6) BS06 MG N/A GO:0000049 ... P60489 39372947
    929442 9dfe:1R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39372947
    929443 9dfe:1R (2.6) BS02 MG N/A GO:0003735 ... Q9Z9H5 39372947
    929444 9dfe:1R (2.6) BS03 MG N/A GO:0003735 ... Q9Z9H5 39372947
    929445 9dfe:1R (2.6) BS04 MG N/A GO:0003735 ... Q9Z9H5 39372947
    929446 9dfe:1S (2.6) BS01 rna N/A GO:0005737 ... Q5SHQ4 39372947
    929447 9dfe:1S (2.6) BS02 rna N/A GO:0005737 ... Q5SHQ4 39372947
    929448 9dfe:1T (2.6) BS01 rna N/A GO:0003735 ... P60490 39372947
    929449 9dfe:1T (2.6) BS02 rna N/A GO:0003735 ... P60490 39372947
    929450 9dfe:1U (2.6) BS01 rna N/A GO:0000027 ... P60491 39372947
    929451 9dfe:1U (2.6) BS02 MG N/A GO:0000027 ... P60491 39372947
    929452 9dfe:1U (2.6) BS03 MG N/A GO:0000027 ... P60491 39372947
    929453 9dfe:1U (2.6) BS04 MG N/A GO:0000027 ... P60491 39372947
    929454 9dfe:1U (2.6) BS05 MG N/A GO:0000027 ... P60491 39372947
    929455 9dfe:1U (2.6) BS06 MG N/A GO:0000027 ... P60491 39372947
    929456 9dfe:1V (2.6) BS01 rna N/A GO:0003735 ... P60492 39372947
    929457 9dfe:1V (2.6) BS02 MG N/A GO:0003735 ... P60492 39372947
    929458 9dfe:1V (2.6) BS03 MG N/A GO:0003735 ... P60492 39372947
    929459 9dfe:1V (2.6) BS04 MG N/A GO:0003735 ... P60492 39372947
    929460 9dfe:1W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 39372947
    929461 9dfe:1W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 39372947
    929462 9dfe:1X (2.6) BS01 rna N/A GO:0005840 ... Q5SHP0 39372947
    929463 9dfe:1Y (2.6) BS01 rna N/A GO:0005840 ... Q5SHP9 39372947
    929464 9dfe:1Y (2.6) BS02 ZN N/A GO:0005840 ... Q5SHP9 39372947
    929465 9dfe:1Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 39372947
    929466 9dfe:1Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 39372947
    929467 9dfe:1b (2.6) BS01 rna N/A GO:0003735 ... P80371 39372947
    929468 9dfe:1b (2.6) BS02 MG N/A GO:0003735 ... P80371 39372947
    929469 9dfe:1c (2.6) BS01 rna N/A GO:0003729 ... P80372 39372947
    929470 9dfe:1d (2.6) BS01 rna N/A GO:0003735 ... P80373 39372947
    929471 9dfe:1d (2.6) BS02 SF4 N/A GO:0003735 ... P80373 39372947
    929472 9dfe:1e (2.6) BS01 rna N/A GO:0005840 ... Q5SHQ5 39372947
    929473 9dfe:1e (2.6) BS02 MG N/A GO:0005840 ... Q5SHQ5 39372947
    929474 9dfe:1f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 39372947
    929475 9dfe:1f (2.6) BS02 MG N/A GO:0003735 ... Q5SLP8 39372947
    929476 9dfe:1g (2.6) BS01 rna N/A GO:0000049 ... P17291 39372947
    929477 9dfe:1h (2.6) BS01 rna N/A GO:0005840 ... P0DOY9 39372947
    929478 9dfe:1i (2.6) BS01 rna N/A GO:0000049 ... P80374 39372947
    929479 9dfe:1j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 39372947
    929480 9dfe:1k (2.6) BS01 rna N/A GO:0005840 ... P80376 39372947
    929481 9dfe:1k (2.6) BS02 MG N/A GO:0005840 ... P80376 39372947
    929482 9dfe:1l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 39372947
    929483 9dfe:1l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 39372947
    929484 9dfe:1m (2.6) BS01 rna N/A GO:0000049 ... P80377 39372947
    929485 9dfe:1m (2.6) BS02 rna N/A GO:0000049 ... P80377 39372947
    929486 9dfe:1m (2.6) BS03 MG N/A GO:0000049 ... P80377 39372947
    929487 9dfe:1n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 39372947
    929488 9dfe:1n (2.6) BS02 MG N/A GO:0003735 ... P0DOY6 39372947
    929489 9dfe:1n (2.6) BS03 ZN N/A GO:0003735 ... P0DOY6 39372947
    929490 9dfe:1o (2.6) BS01 rna N/A GO:0005737 ... Q5SJ76 39372947
    929491 9dfe:1o (2.6) BS02 rna N/A GO:0005737 ... Q5SJ76 39372947
    929492 9dfe:1p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 39372947
    929493 9dfe:1q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 39372947
    929494 9dfe:1r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 39372947
    929495 9dfe:1s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 39372947
    929496 9dfe:1t (2.6) BS01 rna N/A GO:0005840 ... P80380 39372947
    929497 9dfe:1t (2.6) BS02 MG N/A GO:0005840 ... P80380 39372947
    929498 9dfe:1y (2.6) BS01 rna N/A GO:0005515 ... P0AD49 39372947
    929499 9dfe:1y (2.6) BS02 MG N/A GO:0005515 ... P0AD49 39372947
    929500 9dfe:1y (2.6) BS03 MG N/A GO:0005515 ... P0AD49 39372947
    929501 9dfe:1y (2.6) BS04 MG N/A GO:0005515 ... P0AD49 39372947
    929502 9dfe:20 (2.6) BS01 rna N/A GO:0003735 ... P60493 39372947
    929503 9dfe:20 (2.6) BS02 rna N/A GO:0003735 ... P60493 39372947
    929504 9dfe:20 (2.6) BS03 MG N/A GO:0003735 ... P60493 39372947
    929505 9dfe:21 (2.6) BS01 rna N/A GO:0005840 ... P60494 39372947
    929506 9dfe:22 (2.6) BS01 rna N/A GO:0005840 ... Q5SHP6 39372947
    929507 9dfe:23 (2.6) BS01 rna N/A GO:0005840 ... Q5SHQ6 39372947
    929508 9dfe:23 (2.6) BS02 rna N/A GO:0005840 ... Q5SHQ6 39372947
    929509 9dfe:23 (2.6) BS03 MG N/A GO:0005840 ... Q5SHQ6 39372947
    929510 9dfe:24 (2.6) BS01 rna N/A GO:0005840 ... Q5SJE1 39372947
    929511 9dfe:24 (2.6) BS02 ZN N/A GO:0005840 ... Q5SJE1 39372947
    929512 9dfe:25 (2.6) BS01 rna N/A GO:0005840 ... P80339 39372947
    929513 9dfe:25 (2.6) BS02 MG N/A GO:0005840 ... P80339 39372947
    929514 9dfe:25 (2.6) BS03 ZN N/A GO:0005840 ... P80339 39372947
    929515 9dfe:26 (2.6) BS01 rna N/A GO:0000049 ... P35871 39372947
    929516 9dfe:26 (2.6) BS02 ZN N/A GO:0000049 ... P35871 39372947
    929517 9dfe:27 (2.6) BS01 rna N/A GO:0005840 ... P80340 39372947
    929518 9dfe:27 (2.6) BS02 MG N/A GO:0005840 ... P80340 39372947
    929519 9dfe:27 (2.6) BS03 MG N/A GO:0005840 ... P80340 39372947
    929520 9dfe:28 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 39372947
    929521 9dfe:29 (2.6) BS01 rna N/A GO:0005737 ... Q5SHR2 39372947
    929522 9dfe:29 (2.6) BS02 ZN N/A GO:0005737 ... Q5SHR2 39372947
    929523 9dfe:2D (2.6) BS01 rna N/A GO:0002181 ... P60405 39372947
    929524 9dfe:2D (2.6) BS02 rna N/A GO:0002181 ... P60405 39372947
    929525 9dfe:2D (2.6) BS03 MG N/A GO:0002181 ... P60405 39372947
    929526 9dfe:2D (2.6) BS04 MG N/A GO:0002181 ... P60405 39372947
    929527 9dfe:2D (2.6) BS05 MG N/A GO:0002181 ... P60405 39372947
    929528 9dfe:2D (2.6) BS06 MG N/A GO:0002181 ... P60405 39372947
    929529 9dfe:2D (2.6) BS07 MG N/A GO:0002181 ... P60405 39372947
    929530 9dfe:2D (2.6) BS08 MG N/A GO:0002181 ... P60405 39372947
    929531 9dfe:2D (2.6) BS09 MG N/A GO:0002181 ... P60405 39372947
    929532 9dfe:2E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39372947
    929533 9dfe:2E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39372947
    929534 9dfe:2E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39372947
    929535 9dfe:2F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39372947
    929536 9dfe:2F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39372947
    929537 9dfe:2F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39372947
    929538 9dfe:2F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39372947
    929539 9dfe:2F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39372947
    929540 9dfe:2G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39372947
    929541 9dfe:2G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39372947
    929542 9dfe:2G (2.6) BS03 MG N/A GO:0000049 ... Q5SHQ0 39372947
    929543 9dfe:2G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39372947
    929544 9dfe:2H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39372947
    929545 9dfe:2I (2.6) BS01 rna N/A GO:0005840 ... Q5SLQ1 39372947
    929546 9dfe:2N (2.6) BS01 rna N/A GO:0003729 ... P60488 39372947
    929547 9dfe:2O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39372947
    929548 9dfe:2O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39372947
    929549 9dfe:2P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39372947
    929550 9dfe:2Q (2.6) BS01 rna N/A GO:0000049 ... P60489 39372947
    929551 9dfe:2Q (2.6) BS02 rna N/A GO:0000049 ... P60489 39372947
    929552 9dfe:2Q (2.6) BS03 MG N/A GO:0000049 ... P60489 39372947
    929553 9dfe:2Q (2.6) BS04 MG N/A GO:0000049 ... P60489 39372947
    929554 9dfe:2R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39372947
    929555 9dfe:2R (2.6) BS02 MG N/A GO:0003735 ... Q9Z9H5 39372947
    929556 9dfe:2S (2.6) BS01 rna N/A GO:0005737 ... Q5SHQ4 39372947
    929557 9dfe:2S (2.6) BS02 rna N/A GO:0005737 ... Q5SHQ4 39372947
    929558 9dfe:2T (2.6) BS01 rna N/A GO:0003735 ... P60490 39372947
    929559 9dfe:2T (2.6) BS02 rna N/A GO:0003735 ... P60490 39372947
    929560 9dfe:2U (2.6) BS01 rna N/A GO:0000027 ... P60491 39372947
    929561 9dfe:2U (2.6) BS02 MG N/A GO:0000027 ... P60491 39372947
    929562 9dfe:2V (2.6) BS01 rna N/A GO:0003735 ... P60492 39372947
    929563 9dfe:2V (2.6) BS02 MG N/A GO:0003735 ... P60492 39372947
    929564 9dfe:2V (2.6) BS03 MG N/A GO:0003735 ... P60492 39372947
    929565 9dfe:2W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 39372947
    929566 9dfe:2W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 39372947
    929567 9dfe:2W (2.6) BS03 MG N/A GO:0003735 ... Q5SHP3 39372947
    929568 9dfe:2X (2.6) BS01 rna N/A GO:0005840 ... Q5SHP0 39372947
    929569 9dfe:2Y (2.6) BS01 rna N/A GO:0005840 ... Q5SHP9 39372947
    929570 9dfe:2Y (2.6) BS02 ZN N/A GO:0005840 ... Q5SHP9 39372947
    929571 9dfe:2Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 39372947
    929572 9dfe:2Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 39372947
    929573 9dfe:2b (2.6) BS01 rna N/A GO:0003735 ... P80371 39372947
    929574 9dfe:2c (2.6) BS01 rna N/A GO:0003729 ... P80372 39372947
    929575 9dfe:2d (2.6) BS01 rna N/A GO:0003735 ... P80373 39372947
    929576 9dfe:2d (2.6) BS02 SF4 N/A GO:0003735 ... P80373 39372947
    929577 9dfe:2e (2.6) BS01 rna N/A GO:0005840 ... Q5SHQ5 39372947
    929578 9dfe:2f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 39372947
    929579 9dfe:2f (2.6) BS02 MG N/A GO:0003735 ... Q5SLP8 39372947
    929580 9dfe:2g (2.6) BS01 rna N/A GO:0000049 ... P17291 39372947
    929581 9dfe:2h (2.6) BS01 rna N/A GO:0005840 ... P0DOY9 39372947
    929582 9dfe:2i (2.6) BS01 rna N/A GO:0000049 ... P80374 39372947
    929583 9dfe:2j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 39372947
    929584 9dfe:2k (2.6) BS01 rna N/A GO:0005840 ... P80376 39372947
    929585 9dfe:2k (2.6) BS02 MG N/A GO:0005840 ... P80376 39372947
    929586 9dfe:2l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 39372947
    929587 9dfe:2l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 39372947
    929588 9dfe:2m (2.6) BS01 rna N/A GO:0000049 ... P80377 39372947
    929589 9dfe:2m (2.6) BS02 rna N/A GO:0000049 ... P80377 39372947
    929590 9dfe:2n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 39372947
    929591 9dfe:2n (2.6) BS02 ZN N/A GO:0003735 ... P0DOY6 39372947
    929592 9dfe:2o (2.6) BS01 rna N/A GO:0005737 ... Q5SJ76 39372947
    929593 9dfe:2o (2.6) BS02 rna N/A GO:0005737 ... Q5SJ76 39372947
    929594 9dfe:2p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 39372947
    929595 9dfe:2q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 39372947
    929596 9dfe:2r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 39372947
    929597 9dfe:2s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 39372947
    929598 9dfe:2t (2.6) BS01 rna N/A GO:0005840 ... P80380 39372947
    929599 9dfe:2t (2.6) BS02 MG N/A GO:0005840 ... P80380 39372947
    929600 9dfe:2y (2.6) BS01 rna N/A GO:0005515 ... P0AD49 39372947

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).