SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    930201 8z9d:r (3.22) BS06 CHL N/A GO:0003729 ... A0A9R0HRF2 39671473
    930202 8z9d:r (3.22) BS07 CHL N/A GO:0003729 ... A0A9R0HRF2 39671473
    930203 8z9d:r (3.22) BS08 CLA N/A GO:0003729 ... A0A9R0HRF2 39671473
    930204 8z9d:r (3.22) BS09 CLA N/A GO:0003729 ... A0A9R0HRF2 39671473
    930205 8z9d:r (3.22) BS10 CLA N/A GO:0003729 ... A0A9R0HRF2 39671473
    930206 8z9d:r (3.22) BS11 CLA N/A GO:0003729 ... A0A9R0HRF2 39671473
    930207 8z9d:r (3.22) BS12 CLA N/A GO:0003729 ... A0A9R0HRF2 39671473
    930208 8z9d:s (3.22) BS01 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930209 8z9d:s (3.22) BS02 CHL N/A GO:0009416 ... A0A9R0IJF3 39671473
    930210 8z9d:s (3.22) BS03 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930211 8z9d:s (3.22) BS04 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930212 8z9d:s (3.22) BS05 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930213 8z9d:s (3.22) BS06 CHL N/A GO:0009416 ... A0A9R0IJF3 39671473
    930214 8z9d:s (3.22) BS07 CHL N/A GO:0009416 ... A0A9R0IJF3 39671473
    930215 8z9d:s (3.22) BS08 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930216 8z9d:s (3.22) BS09 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930217 8z9d:s (3.22) BS10 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930218 8z9d:s (3.22) BS11 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930219 8z9d:s (3.22) BS12 CLA N/A GO:0009416 ... A0A9R0IJF3 39671473
    930220 8z9d:y (3.22) BS01 CHL N/A GO:0009416 ... P12333 39671473
    930221 8z9d:y (3.22) BS02 CHL N/A GO:0009416 ... P12333 39671473
    930222 8z9d:y (3.22) BS03 CHL N/A GO:0009416 ... P12333 39671473
    930223 8z9d:y (3.22) BS04 CLA N/A GO:0009416 ... P12333 39671473
    930224 8z9d:y (3.22) BS05 CLA N/A GO:0009416 ... P12333 39671473
    930225 8z9d:y (3.22) BS06 CLA N/A GO:0009416 ... P12333 39671473
    930226 8z9d:y (3.22) BS07 CHL N/A GO:0009416 ... P12333 39671473
    930227 8z9d:y (3.22) BS08 CHL N/A GO:0009416 ... P12333 39671473
    930228 8z9d:y (3.22) BS09 CHL N/A GO:0009416 ... P12333 39671473
    930229 8z9d:y (3.22) BS10 CHL N/A GO:0009416 ... P12333 39671473
    930230 8z9d:y (3.22) BS11 CHL N/A GO:0009416 ... P12333 39671473
    930231 8z9d:y (3.22) BS12 CLA N/A GO:0009416 ... P12333 39671473
    930232 8z9d:y (3.22) BS13 CLA N/A GO:0009416 ... P12333 39671473
    930233 8z9d:y (3.22) BS14 CLA N/A GO:0009416 ... P12333 39671473
    930234 8z9d:y (3.22) BS15 CLA N/A GO:0009416 ... P12333 39671473
    930235 8z9d:y (3.22) BS16 CLA N/A GO:0009416 ... P12333 39671473
    930236 8z9d:z (3.22) BS01 CLA N/A GO:0009523 ... Q9M3M6 39671473
    930237 8z9e:B (3.13) BS01 rna N/A N/A N/A 39143216
    930238 8z9e:B (3.13) BS02 ZN N/A N/A N/A 39143216
    930239 8z9e:C (3.13) BS01 rna N/A N/A N/A 39143216
    930240 8z9e:C (3.13) BS02 rna N/A N/A N/A 39143216
    930241 8z9e:C (3.13) BS03 ZN N/A N/A N/A 39143216
    930242 8z9e:D (3.13) BS01 rna N/A N/A N/A 39143216
    930243 8z9e:D (3.13) BS02 rna N/A N/A N/A 39143216
    930244 8z9e:D (3.13) BS03 ZN N/A N/A N/A 39143216
    930245 8z9e:E (3.13) BS01 rna N/A N/A N/A 39143216
    930246 8z9e:E (3.13) BS02 rna N/A N/A N/A 39143216
    930247 8z9e:E (3.13) BS03 ZN N/A N/A N/A 39143216
    930248 8z9e:F (3.13) BS01 rna N/A N/A N/A 39143216
    930249 8z9e:F (3.13) BS02 rna N/A N/A N/A 39143216
    930250 8z9e:F (3.13) BS03 ZN N/A N/A N/A 39143216
    930251 8z9e:G (3.13) BS01 rna N/A N/A N/A 39143216
    930252 8z9e:H (3.13) BS01 rna N/A N/A N/A 39143216
    930253 8z9e:H (3.13) BS02 ZN N/A N/A N/A 39143216
    930254 8z9e:I (3.13) BS01 rna N/A N/A N/A 39143216
    930255 8z9e:J (3.13) BS01 rna N/A N/A N/A 39143216
    930256 8z9e:J (3.13) BS02 rna N/A N/A N/A 39143216
    930257 8z9e:J (3.13) BS03 ZN N/A N/A N/A 39143216
    930258 8z9e:K (3.13) BS01 rna N/A N/A N/A 39143216
    930259 8z9e:L (3.13) BS01 rna N/A N/A N/A 39143216
    930260 8z9f:A (1.6) BS01 NAI N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930261 8z9f:C (1.6) BS01 NAI N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930262 8z9f:D (1.6) BS01 NAI N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930263 8z9f:E (1.6) BS01 NAI N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930264 8z9f:H (1.6) BS01 NAI N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930265 8z9g:A (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930266 8z9g:B (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930267 8z9g:C (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930268 8z9g:D (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930269 8z9g:E (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930270 8z9g:G (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930271 8z9g:H (1.68) BS01 NDP N/A GO:0016491 ... A0A6S6PLJ6 39368682
    930272 8z9h:A (2.7) BS01 rna ? GO:0003723 ... P27194 38816392
    930273 8z9h:A (2.7) BS02 rna ? GO:0003723 ... P27194 38816392
    930274 8z9h:A (2.7) BS03 rna ? GO:0003723 ... P27194 38816392
    930275 8z9h:B (2.7) BS01 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930276 8z9h:B (2.7) BS02 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930277 8z9h:B (2.7) BS03 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930278 8z9h:B (2.7) BS04 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930279 8z9h:B (2.7) BS05 V9G 2.7.7.48 GO:0000166 ... O41353 38816392
    930280 8z9h:C (2.7) BS01 rna ? GO:0006370 ... Q9YNA4 38816392
    930281 8z9h:C (2.7) BS02 rna ? GO:0006370 ... Q9YNA4 38816392
    930282 8z9h:C (2.7) BS03 V9G ? GO:0006370 ... Q9YNA4 38816392
    930283 8z9h:H (2.7) BS01 rna ? GO:0003723 ... P27194 38816392
    930284 8z9h:H (2.7) BS02 V9G ? GO:0003723 ... P27194 38816392
    930285 8z9h:I (2.7) BS01 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930286 8z9o:R (2.4) BS01 CLR N/A GO:0004930 ... P46093 40215960
    930287 8z9p:R (2.5) BS01 CLR N/A GO:0004930 ... P46093 40215960
    930288 8z9q:A (2.33) BS01 rna ? GO:0003723 ... P27194 38816392
    930289 8z9q:B (2.33) BS01 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930290 8z9r:A (2.58) BS01 rna ? GO:0003723 ... P27194 38816392
    930291 8z9r:A (2.58) BS02 rna ? GO:0003723 ... P27194 38816392
    930292 8z9r:A (2.58) BS03 rna ? GO:0003723 ... P27194 38816392
    930293 8z9r:B (2.58) BS01 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930294 8z9r:B (2.58) BS02 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930295 8z9r:B (2.58) BS03 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930296 8z9r:B (2.58) BS04 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930297 8z9r:C (2.58) BS01 rna ? GO:0006370 ... Q9YNA4 38816392
    930298 8z9r:C (2.58) BS02 rna ? GO:0006370 ... Q9YNA4 38816392
    930299 8z9r:H (2.58) BS01 rna ? GO:0003723 ... P27194 38816392
    930300 8z9r:I (2.58) BS01 rna 2.7.7.48 GO:0000166 ... O41353 38816392
    930301 8z9s:A (1.69) BS01 HEM N/A GO:0004497 ... A0A917YWB9 N/A
    930302 8z9x:A (2.96) BS01 A1L1A N/A GO:0000038 ... P28288 39223112
    930303 8z9x:B (2.96) BS01 A1L1A N/A GO:0000038 ... P28288 39223112
    930304 8za1:A (1.6) BS01 NAP N/A GO:0008206 ... Q84EX5 N/A
    930305 8za2:A (2.78) BS01 NAP N/A GO:0008206 ... Q84EX5 N/A
    930306 8za2:B (2.78) BS01 NAP N/A GO:0008206 ... Q84EX5 N/A
    930307 8za3:A (1.56) BS01 NAP N/A GO:0008206 ... Q84EX5 N/A
    930308 8za6:e (3.43) BS01 peptide N/A GO:0004888 ... P07766 40334665
    930309 8za6:m (3.43) BS01 peptide N/A N/A Q6PJ56 40334665
    930310 8za6:m (3.43) BS02 CLR N/A N/A Q6PJ56 40334665
    930311 8za7:A (1.65) BS01 AR6 N/A N/A Q8YAQ0 N/A
    930312 8za7:A (1.65) BS02 MG N/A N/A Q8YAQ0 N/A
    930313 8za7:A (1.65) BS03 MG N/A N/A Q8YAQ0 N/A
    930314 8za8:A (2.1) BS01 FAD N/A N/A A8J8W0 40378212
    930315 8za9:C (3.7) BS01 H6P N/A GO:0001817 ... O00481 40334665
    930316 8zaa:D (3.46) BS01 EIP N/A N/A O00481 40334665
    930317 8zaa:E (3.46) BS01 EIP N/A N/A Q7KYR7 40334665
    930318 8zac:A (2.45) BS01 ZN N/A GO:0009688 ... A0A384JQC9 39747870
    930319 8zac:B (2.45) BS01 ZN N/A GO:0009688 ... A0A384JQC9 39747870
    930320 8zad:A (2.1) BS01 ZN N/A N/A A0ACD6BA71 39747870
    930321 8zae:A (2.28) BS01 FPS N/A N/A A0ACD6BA71 39747870
    930322 8zae:A (2.28) BS02 ZN N/A N/A A0ACD6BA71 39747870
    930323 8zae:B (2.28) BS01 FPS N/A N/A A0ACD6BA71 39747870
    930324 8zae:B (2.28) BS02 ZN N/A N/A A0ACD6BA71 39747870
    930325 8zaf:A (1.96) BS01 ZN N/A GO:0005975 ... N/A 39747870
    930326 8zaf:B (1.96) BS01 ZN N/A GO:0005975 ... N/A 39747870
    930327 8zaf:C (1.96) BS01 ZN N/A GO:0005975 ... N/A 39747870
    930328 8zag:A (1.6) BS01 ZN N/A N/A N/A 39747870
    930329 8zag:A (1.6) BS02 POP N/A N/A N/A 39747870
    930330 8zag:A (1.6) BS03 MG N/A N/A N/A 39747870
    930331 8zai:A (3.5) BS01 A1L1B N/A GO:0008233 ... A0A2P1G738 N/A
    930332 8zai:B (3.5) BS01 A1L1B N/A GO:0008233 ... A0A2P1G738 N/A
    930333 8zam:A (2.5) BS01 L9Q N/A GO:0016020 ... Q8RUT8 39181878
    930334 8zam:B (2.5) BS01 L9Q N/A GO:0016020 ... Q8RUT8 39181878
    930335 8zan:A (2.4) BS01 RET N/A GO:0016020 ... Q8RUT8 39181878
    930336 8zan:B (2.4) BS01 RET N/A GO:0016020 ... Q8RUT8 39181878
    930337 8zao:A (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930338 8zao:B (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930339 8zao:C (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930340 8zap:A (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930341 8zap:B (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930342 8zap:C (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930343 8zaq:A (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930344 8zaq:B (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930345 8zaq:C (2.6) BS01 RET N/A GO:0016020 ... N/A 39181878
    930346 8zav:A (2.9) BS01 NAP N/A GO:0016491 ... A7TM80 N/A
    930347 8zav:B (2.9) BS01 NAP N/A GO:0016491 ... A7TM80 N/A
    930348 8zaw:A (2.7) BS01 MG N/A GO:0000175 ... Q8YP11 N/A
    930349 8zax:A (1.54) BS01 NAP N/A GO:0008206 ... A0A1D7ZZ64 N/A
    930350 8zax:B (1.54) BS01 NAP N/A GO:0008206 ... A0A1D7ZZ64 N/A
    930351 8zay:L (2.3) BS01 ZN N/A N/A N/A 40009668
    930352 8zay:M (2.3) BS01 ZN N/A N/A N/A 40009668
    930353 8zay:M (2.3) BS02 ZN N/A N/A N/A 40009668
    930354 8zb0:A (3.7) BS01 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930355 8zb0:A (3.7) BS02 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930356 8zb0:A (3.7) BS03 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930357 8zb0:B (3.7) BS01 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930358 8zb0:B (3.7) BS02 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930359 8zb0:B (3.7) BS03 ZN N/A GO:0000139 ... Q9Y6M5 39422023
    930360 8zb1:A (2.86) BS01 A1D74 N/A GO:0005515 ... P28496 38964337
    930361 8zb1:C (2.86) BS01 A1D74 N/A GO:0005515 ... P28496 38964337
    930362 8zb2:A (2.69) BS01 FAD N/A GO:0016491 ... N/A 39142977
    930363 8zb2:B (2.69) BS01 FAD N/A GO:0016491 ... N/A 39142977
    930364 8zb3:A (2.2) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930365 8zb3:A (2.2) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930366 8zb3:A (2.2) BS03 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930367 8zb3:A (2.2) BS04 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930368 8zb3:B (2.2) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930369 8zb3:B (2.2) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930370 8zb3:D (2.2) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930371 8zb3:D (2.2) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930372 8zb3:E (2.2) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930373 8zb3:E (2.2) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930374 8zb3:E (2.2) BS03 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930375 8zb3:F (2.2) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930376 8zb4:A (2.7) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930377 8zb4:A (2.7) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930378 8zb4:A (2.7) BS03 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930379 8zb4:A (2.7) BS04 NAD N/A GO:0005829 ... A0A0U1C370 39521043
    930380 8zb4:B (2.7) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930381 8zb4:B (2.7) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930382 8zb4:B (2.7) BS03 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930383 8zb4:B (2.7) BS04 NAD N/A GO:0005829 ... A0A0U1C370 39521043
    930384 8zb5:A (2.6) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930385 8zb5:A (2.6) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930386 8zb5:A (2.6) BS03 AMP N/A GO:0005829 ... A0A0U1C370 39521043
    930387 8zb5:B (2.6) BS01 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930388 8zb5:B (2.6) BS02 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930389 8zb5:B (2.6) BS03 CA N/A GO:0005829 ... A0A0U1C370 39521043
    930390 8zb5:B (2.6) BS04 AMP N/A GO:0005829 ... A0A0U1C370 39521043
    930391 8zb7:A (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930392 8zb7:B (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930393 8zb7:C (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930394 8zb7:D (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930395 8zb7:E (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930396 8zb7:F (3.19) BS01 ADP N/A GO:0000146 ... P68032 N/A
    930397 8zb8:A (2.94) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    930398 8zb8:A (2.94) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    930399 8zb8:A (2.94) BS03 A1D8I N/A GO:0000226 ... Q2XVP4 N/A
    930400 8zb8:B (2.94) BS01 GDP N/A GO:0003924 ... A0A287AGU7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).