SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4643 4644 4645 4646 4647 4648 4649 4650 4651 4652 4653 4654 4655 4656 4657 4658 4659 4660 4661 4662 4663 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    930401 8zb8:B (2.94) BS02 A1D8I N/A GO:0003924 ... A0A287AGU7 N/A
    930402 8zb8:C (2.94) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    930403 8zb8:C (2.94) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    930404 8zb8:D (2.94) BS01 GDP N/A GO:0003924 ... A0A287AGU7 N/A
    930405 8zb8:D (2.94) BS02 A1D8I N/A GO:0003924 ... A0A287AGU7 N/A
    930406 8zb8:F (2.94) BS01 ACP N/A GO:0000226 ... A0A8V0Z8P0 N/A
    930407 8zbd:A (2.33) BS01 FE N/A GO:0006749 ... A0A2N9YEY8 39456744
    930408 8zbd:B (2.33) BS01 FE N/A GO:0006749 ... A0A2N9YEY8 39456744
    930409 8zbe:A (3.24) BS01 peptide N/A GO:0004930 ... P07550
    P35346
    38926478
    930410 8zbf:A (2.8) BS01 dna N/A GO:0003723 ... P0DTC9 N/A
    930411 8zbf:B (2.8) BS01 dna N/A GO:0003723 ... P0DTC9 N/A
    930412 8zbf:C (2.8) BS01 dna N/A GO:0003723 ... P0DTC9 N/A
    930413 8zbf:D (2.8) BS01 dna N/A GO:0003723 ... P0DTC9 N/A
    930414 8zbg:A (2.67) BS01 A1L1N N/A N/A Q99594 39487823
    930415 8zbg:B (2.67) BS01 A1L1N N/A N/A Q99594 39487823
    930416 8zbg:C (2.67) BS01 A1L1N N/A N/A Q99594 39487823
    930417 8zbh:A (2.6) BS01 A1L1O N/A N/A Q99594 39487823
    930418 8zbh:B (2.6) BS01 A1L1O N/A N/A Q99594 39487823
    930419 8zbh:C (2.6) BS01 A1L1O N/A N/A Q99594 39487823
    930420 8zbi:D (2.79) BS01 peptide N/A GO:0004930 ... P32745 N/A
    930421 8zbj:R (2.94) BS01 peptide N/A GO:0004930 ... P35346 N/A
    930422 8zbk:B (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930423 8zbk:D (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930424 8zbk:I (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930425 8zbk:J (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930426 8zbk:K (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930427 8zbk:M (4.28) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930428 8zbl:A (2.7) BS01 A1D78 N/A GO:0000287 ... P34913 39413443
    930429 8zbl:A (2.7) BS02 MG N/A GO:0000287 ... P34913 39413443
    930430 8zbm:E (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930431 8zbm:H (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930432 8zbm:O (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930433 8zbm:P (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930434 8zbm:Q (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930435 8zbm:R (3.32) BS01 ADP N/A GO:0001725 ... P68136 N/A
    930436 8zbn:B (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930437 8zbn:D (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930438 8zbn:I (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930439 8zbn:J (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930440 8zbn:K (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930441 8zbn:M (3.02) BS01 ADP N/A GO:0000146 ... P68033 N/A
    930442 8zbp:A (1.41) BS01 A1D76 N/A GO:0008233 ... P0DTC1 41311409
    930443 8zbr:A (2.92) BS01 CLR N/A GO:0001409 ... O15439 N/A
    930444 8zbr:A (2.92) BS02 Y01 N/A GO:0001409 ... O15439 N/A
    930445 8zbr:A (2.92) BS03 Y01 N/A GO:0001409 ... O15439 N/A
    930446 8zbr:A (2.92) BS04 Y01 N/A GO:0001409 ... O15439 N/A
    930447 8zbr:A (2.92) BS05 CLR N/A GO:0001409 ... O15439 N/A
    930448 8zbr:A (2.92) BS06 Y01 N/A GO:0001409 ... O15439 N/A
    930449 8zbr:A (2.92) BS07 CLR N/A GO:0001409 ... O15439 N/A
    930450 8zbs:A (2.96) BS01 R1Q N/A GO:0001409 ... O15439 40138312
    930451 8zbs:A (2.96) BS02 ANP N/A GO:0001409 ... O15439 40138312
    930452 8zbs:A (2.96) BS03 ANP N/A GO:0001409 ... O15439 40138312
    930453 8zbt:A (3.9) BS01 URF N/A GO:0001409 ... O15439 40138312
    930454 8zbt:A (3.9) BS02 ATP N/A GO:0001409 ... O15439 40138312
    930455 8zbt:A (3.9) BS03 ATP N/A GO:0001409 ... O15439 40138312
    930456 8zbu:A (3.28) BS01 FMM N/A GO:0001409 ... O15439 40138312
    930457 8zbu:A (3.28) BS02 MG N/A GO:0001409 ... O15439 40138312
    930458 8zbu:A (3.28) BS03 ATP N/A GO:0001409 ... O15439 40138312
    930459 8zbu:A (3.28) BS04 ATP N/A GO:0001409 ... O15439 40138312
    930460 8zbw:R (2.58) BS01 A1L1D N/A GO:0004930 ... P25090 40069490
    930461 8zc8:A (2.8) BS01 SAH N/A N/A Q9X5Q9 N/A
    930462 8zc8:B (2.8) BS01 SAH N/A N/A Q9X5Q9 N/A
    930463 8zc8:B (2.8) BS02 MQA N/A N/A Q9X5Q9 N/A
    930464 8zc9:A (3.14) BS01 NAD N/A N/A N/A 39039073
    930465 8zc9:B (3.14) BS01 NAD N/A N/A N/A 39039073
    930466 8zc9:D (3.14) BS01 NAD N/A N/A N/A 39039073
    930467 8zc9:E (3.14) BS01 NAD N/A N/A N/A 39039073
    930468 8zca:A (2.5) BS01 CA N/A N/A N/A 40578556
    930469 8zca:B (2.5) BS01 CA N/A N/A N/A 40578556
    930470 8zcc:A (1.55) BS01 X77 N/A GO:0008233 ... P0C6X5 N/A
    930471 8zcc:B (1.55) BS01 X77 N/A GO:0008233 ... P0C6X5 N/A
    930472 8zci:A (1.35) BS01 IZP N/A GO:0005319 ... P05413 N/A
    930473 8zcj:G (3.09) BS01 peptide N/A GO:0004930 ... P07550
    P35346
    38926478
    930474 8zck:A (2.0) BS01 GAL ? N/A P0DOX5 N/A
    930475 8zck:B (2.0) BS01 BMA ? N/A P0DOX5 N/A
    930476 8zcl:A (2.6) BS01 GAL ? N/A P0DOX5 N/A
    930477 8zcl:A (2.6) BS02 FUL ? N/A P0DOX5 N/A
    930478 8zcm:A (2.64) BS01 GAL ? N/A P0DOX5 N/A
    930479 8zcr:A (1.93) BS01 ZN N/A GO:0004867 ... P50453 39382088
    930480 8zcr:A (1.93) BS02 ZN N/A GO:0004867 ... P50453 39382088
    930481 8zcr:A (1.93) BS03 ZN N/A GO:0004867 ... P50453 39382088
    930482 8zcr:A (1.93) BS04 ZN N/A GO:0004867 ... P50453 39382088
    930483 8zcr:A (1.93) BS05 ZN N/A GO:0004867 ... P50453 39382088
    930484 8zcr:B (1.93) BS01 ZN N/A N/A P50453 39382088
    930485 8zcr:B (1.93) BS02 ZN N/A N/A P50453 39382088
    930486 8zcs:A (2.79) BS01 peptide N/A GO:0008643 ... Q07820 40131955
    930487 8zcs:A (2.79) BS02 GLC N/A GO:0008643 ... Q07820 40131955
    930488 8zcs:A (2.79) BS03 GLC N/A GO:0008643 ... Q07820 40131955
    930489 8zcs:A (2.79) BS04 GLC N/A GO:0008643 ... Q07820 40131955
    930490 8zcs:B (2.79) BS01 peptide N/A GO:0008643 ... Q07820 40131955
    930491 8zcs:B (2.79) BS02 GLC N/A GO:0008643 ... Q07820 40131955
    930492 8zcs:B (2.79) BS03 GLC N/A GO:0008643 ... Q07820 40131955
    930493 8zcs:B (2.79) BS04 GLC N/A GO:0008643 ... Q07820 40131955
    930494 8zcy:A (3.17) BS01 rna N/A GO:0003676 ... J7RUA5 N/A
    930495 8zcy:A (3.17) BS02 dna N/A GO:0003676 ... J7RUA5 N/A
    930496 8zcy:A (3.17) BS03 dna N/A GO:0003676 ... J7RUA5 N/A
    930497 8zcz:A (2.9) BS01 rna N/A GO:0003676 ... J7RUA5 N/A
    930498 8zcz:A (2.9) BS02 dna N/A GO:0003676 ... J7RUA5 N/A
    930499 8zcz:A (2.9) BS03 dna N/A GO:0003676 ... J7RUA5 N/A
    930500 8zd0:A (2.76) BS01 rna N/A GO:0003676 ... J7RUA5 N/A
    930501 8zd0:A (2.76) BS02 dna N/A GO:0003676 ... J7RUA5 N/A
    930502 8zd0:A (2.76) BS03 dna N/A GO:0003676 ... J7RUA5 N/A
    930503 8zd0:A (2.76) BS04 MG N/A GO:0003676 ... J7RUA5 N/A
    930504 8zd3:A (2.3) BS01 CDP N/A GO:0004674 ... Q96QP1 39116220
    930505 8zd3:A (2.3) BS02 A1L1P N/A GO:0004674 ... Q96QP1 39116220
    930506 8zd3:B (2.3) BS01 ZN N/A GO:0004674 ... Q96QP1 39116220
    930507 8zd3:C (2.3) BS01 CDP N/A GO:0004674 ... Q96QP1 39116220
    930508 8zd3:C (2.3) BS02 A1L1P N/A GO:0004674 ... Q96QP1 39116220
    930509 8zd3:D (2.3) BS01 ZN N/A GO:0004674 ... Q96QP1 39116220
    930510 8zd5:A (2.89) BS01 ZN N/A GO:0004784 ... Q8WNN6 39548731
    930511 8zd5:A (2.89) BS02 CU N/A GO:0004784 ... Q8WNN6 39548731
    930512 8zd5:D (2.89) BS01 ZN N/A GO:0004784 ... Q8WNN6 39548731
    930513 8zd5:D (2.89) BS02 CU N/A GO:0004784 ... Q8WNN6 39548731
    930514 8zd5:G (2.89) BS01 ZN N/A GO:0004784 ... Q8WNN6 39548731
    930515 8zd5:G (2.89) BS02 CU N/A GO:0004784 ... Q8WNN6 39548731
    930516 8zd5:J (2.89) BS01 ZN N/A GO:0004784 ... Q8WNN6 39548731
    930517 8zd5:J (2.89) BS02 CU N/A GO:0004784 ... Q8WNN6 39548731
    930518 8zda:A (3.14) BS01 rna N/A GO:0003676 ... J7RUA5 N/A
    930519 8zda:A (3.14) BS02 dna N/A GO:0003676 ... J7RUA5 N/A
    930520 8zda:A (3.14) BS03 dna N/A GO:0003676 ... J7RUA5 N/A
    930521 8zda:A (3.14) BS04 dna N/A GO:0003676 ... J7RUA5 N/A
    930522 8zda:A (3.14) BS05 MG N/A GO:0003676 ... J7RUA5 N/A
    930523 8zda:A (3.14) BS06 MG N/A GO:0003676 ... J7RUA5 N/A
    930524 8zda:A (3.14) BS07 MG N/A GO:0003676 ... J7RUA5 N/A
    930525 8zdb:A (3.6) BS01 rna N/A GO:0000028 ... P08865 39947183
    930526 8zdb:B (3.6) BS01 rna N/A GO:0002181 ... P61247 39947183
    930527 8zdb:C (3.6) BS01 rna N/A GO:0002181 ... P15880 39947183
    930528 8zdb:D (3.6) BS01 rna N/A GO:0001228 ... P23396 39947183
    930529 8zdb:E (3.6) BS01 rna N/A GO:0002181 ... P62701 39947183
    930530 8zdb:F (3.6) BS01 rna N/A GO:0002181 ... P46782 39947183
    930531 8zdb:G (3.6) BS01 rna N/A GO:0002181 ... P62753 39947183
    930532 8zdb:H (3.6) BS01 rna N/A GO:0002181 ... P62081 39947183
    930533 8zdb:I (3.6) BS01 rna N/A GO:0002181 ... P62241 39947183
    930534 8zdb:J (3.6) BS01 rna N/A GO:0002181 ... P46781 39947183
    930535 8zdb:K (3.6) BS01 rna N/A GO:0002181 ... P46783 39947183
    930536 8zdb:L (3.6) BS01 rna N/A GO:0002181 ... P62280 39947183
    930537 8zdb:M (3.6) BS01 rna N/A GO:0002181 ... P25398 39947183
    930538 8zdb:M (3.6) BS02 peptide N/A GO:0002181 ... P25398 39947183
    930539 8zdb:N (3.6) BS01 rna N/A GO:0000462 ... P62277 39947183
    930540 8zdb:O (3.6) BS01 rna N/A GO:0000028 ... P62263 39947183
    930541 8zdb:P (3.6) BS01 rna N/A GO:0000056 ... P62841 39947183
    930542 8zdb:Q (3.6) BS01 rna N/A GO:0000462 ... P62249 39947183
    930543 8zdb:R (3.6) BS01 rna N/A GO:0002181 ... P08708 39947183
    930544 8zdb:S (3.6) BS01 rna N/A GO:0002181 ... P62269 39947183
    930545 8zdb:T (3.6) BS01 rna N/A GO:0000028 ... P39019 39947183
    930546 8zdb:U (3.6) BS01 rna N/A GO:0002181 ... P60866 39947183
    930547 8zdb:W (3.6) BS01 rna N/A GO:0002181 ... P62244 39947183
    930548 8zdb:X (3.6) BS01 rna N/A GO:0002181 ... P62266 39947183
    930549 8zdb:Y (3.6) BS01 rna N/A GO:0002181 ... P62847 39947183
    930550 8zdb:Z (3.6) BS01 rna N/A GO:0002181 ... P62851 39947183
    930551 8zdb:a (3.6) BS01 rna N/A GO:0002181 ... P62854 39947183
    930552 8zdb:a (3.6) BS02 ZN N/A GO:0002181 ... P62854 39947183
    930553 8zdb:b (3.6) BS01 rna N/A GO:0002181 ... P42677 39947183
    930554 8zdb:c (3.6) BS01 rna N/A GO:0000028 ... P62857 39947183
    930555 8zdb:d (3.6) BS01 rna N/A GO:0002181 ... P62273 39947183
    930556 8zdb:e (3.6) BS01 rna N/A GO:0003735 ... P62861 39947183
    930557 8zdb:g (3.6) BS01 rna N/A GO:0001891 ... P63244 39947183
    930558 8zdb:p (3.6) BS01 rna N/A GO:0003824 ... O14730 39947183
    930559 8zdc:A (3.8) BS01 rna N/A GO:0000028 ... P08865 39947183
    930560 8zdc:B (3.8) BS01 rna N/A GO:0002181 ... P61247 39947183
    930561 8zdc:C (3.8) BS01 rna N/A GO:0002181 ... P15880 39947183
    930562 8zdc:D (3.8) BS01 rna N/A GO:0001228 ... P23396 39947183
    930563 8zdc:E (3.8) BS01 rna N/A GO:0002181 ... P62701 39947183
    930564 8zdc:F (3.8) BS01 rna N/A GO:0002181 ... P46782 39947183
    930565 8zdc:G (3.8) BS01 rna N/A GO:0002181 ... P62753 39947183
    930566 8zdc:H (3.8) BS01 rna N/A GO:0002181 ... P62081 39947183
    930567 8zdc:I (3.8) BS01 rna N/A GO:0002181 ... P62241 39947183
    930568 8zdc:J (3.8) BS01 rna N/A GO:0002181 ... P46781 39947183
    930569 8zdc:K (3.8) BS01 rna N/A GO:0002181 ... P46783 39947183
    930570 8zdc:L (3.8) BS01 rna N/A GO:0002181 ... P62280 39947183
    930571 8zdc:M (3.8) BS01 rna N/A GO:0002181 ... P25398 39947183
    930572 8zdc:N (3.8) BS01 rna N/A GO:0000462 ... P62277 39947183
    930573 8zdc:O (3.8) BS01 rna N/A GO:0000028 ... P62263 39947183
    930574 8zdc:P (3.8) BS01 rna N/A GO:0000056 ... P62841 39947183
    930575 8zdc:Q (3.8) BS01 rna N/A GO:0000462 ... P62249 39947183
    930576 8zdc:R (3.8) BS01 rna N/A GO:0002181 ... P08708 39947183
    930577 8zdc:S (3.8) BS01 rna N/A GO:0002181 ... P62269 39947183
    930578 8zdc:T (3.8) BS01 rna N/A GO:0000028 ... P39019 39947183
    930579 8zdc:U (3.8) BS01 rna N/A GO:0002181 ... P60866 39947183
    930580 8zdc:W (3.8) BS01 rna N/A GO:0002181 ... P62244 39947183
    930581 8zdc:X (3.8) BS01 rna N/A GO:0002181 ... P62266 39947183
    930582 8zdc:Y (3.8) BS01 rna N/A GO:0002181 ... P62847 39947183
    930583 8zdc:Z (3.8) BS01 rna N/A GO:0002181 ... P62851 39947183
    930584 8zdc:b (3.8) BS01 rna N/A GO:0002181 ... P42677 39947183
    930585 8zdc:c (3.8) BS01 rna N/A GO:0000028 ... P62857 39947183
    930586 8zdc:d (3.8) BS01 rna N/A GO:0002181 ... P62273 39947183
    930587 8zdc:d (3.8) BS02 ZN N/A GO:0002181 ... P62273 39947183
    930588 8zdc:g (3.8) BS01 rna N/A GO:0001891 ... P63244 39947183
    930589 8zdc:p (3.8) BS01 rna N/A GO:0003824 ... O14730 39947183
    930590 8zdc:t (3.8) BS01 rna N/A GO:0000056 ... Q96GA3 39947183
    930591 8zdc:u (3.8) BS01 rna N/A GO:0000462 ... Q2NL82 39947183
    930592 8zdc:x (3.8) BS01 rna N/A GO:0003676 ... Q9NRX1 39947183
    930593 8zdc:y (3.8) BS01 rna N/A GO:0004521 ... Q9ULX3 39947183
    930594 8zdc:y (3.8) BS02 ZN N/A GO:0004521 ... Q9ULX3 39947183
    930595 8zdd:A (3.7) BS01 rna N/A GO:0000028 ... P08865 39947183
    930596 8zdd:B (3.7) BS01 rna N/A GO:0002181 ... P61247 39947183
    930597 8zdd:C (3.7) BS01 rna N/A GO:0002181 ... P15880 39947183
    930598 8zdd:D (3.7) BS01 rna N/A GO:0001228 ... P23396 39947183
    930599 8zdd:E (3.7) BS01 rna N/A GO:0002181 ... P62701 39947183
    930600 8zdd:F (3.7) BS01 rna N/A GO:0002181 ... P46782 39947183

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).