SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    931601 8zg9:B (1.673) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931602 8zg9:B (1.673) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931603 8zg9:C (1.673) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931604 8zg9:C (1.673) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931605 8zg9:D (1.673) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931606 8zg9:D (1.673) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931607 8zg9:E (1.673) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931608 8zg9:E (1.673) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931609 8zg9:F (1.673) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931610 8zg9:F (1.673) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931611 8zga:A (2.1) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931612 8zga:A (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931613 8zga:B (2.1) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931614 8zga:B (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931615 8zga:C (2.1) BS01 MG N/A GO:0008270 ... Q8LBL5 40841552
    931616 8zga:C (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931617 8zga:C (2.1) BS03 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931618 8zga:D (2.1) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931619 8zga:D (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931620 8zga:E (2.1) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931621 8zga:E (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931622 8zga:F (2.1) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931623 8zga:F (2.1) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931624 8zgb:A (2.785) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931625 8zgb:A (2.785) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931626 8zgb:B (2.785) BS01 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931627 8zgb:B (2.785) BS02 ZN N/A GO:0008270 ... Q8LBL5 40841552
    931628 8zgc:A (3.58) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931629 8zgc:A (3.58) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931630 8zgc:A (3.58) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931631 8zgc:A (3.58) BS04 MN N/A GO:0005506 ... O60568 40069201
    931632 8zgc:B (3.58) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931633 8zgc:B (3.58) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931634 8zgc:B (3.58) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931635 8zgc:B (3.58) BS04 MN N/A GO:0005506 ... O60568 40069201
    931636 8zgc:U (3.58) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931637 8zgc:U (3.58) BS02 UDP N/A GO:0005788 ... Q8NBJ5 40069201
    931638 8zgc:U (3.58) BS03 MN N/A GO:0005788 ... Q8NBJ5 40069201
    931639 8zgc:V (3.58) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931640 8zgc:V (3.58) BS02 UDP N/A GO:0005788 ... Q8NBJ5 40069201
    931641 8zge:A (3.4) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931642 8zge:A (3.4) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931643 8zge:A (3.4) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931644 8zge:A (3.4) BS04 MN N/A GO:0005506 ... O60568 40069201
    931645 8zge:B (3.4) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931646 8zge:B (3.4) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931647 8zge:B (3.4) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931648 8zge:B (3.4) BS04 MN N/A GO:0005506 ... O60568 40069201
    931649 8zge:U (3.4) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931650 8zge:U (3.4) BS02 UDP N/A GO:0005788 ... Q8NBJ5 40069201
    931651 8zge:V (3.4) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931652 8zge:V (3.4) BS02 UDP N/A GO:0005788 ... Q8NBJ5 40069201
    931653 8zgg:A (3.75) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931654 8zgg:A (3.75) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931655 8zgg:A (3.75) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931656 8zgg:A (3.75) BS04 MN N/A GO:0005506 ... O60568 40069201
    931657 8zgg:B (3.75) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931658 8zgg:B (3.75) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931659 8zgg:B (3.75) BS03 UDP N/A GO:0005506 ... O60568 40069201
    931660 8zgg:B (3.75) BS04 MN N/A GO:0005506 ... O60568 40069201
    931661 8zgg:U (3.75) BS01 660 N/A GO:0005788 ... Q8NBJ5 40069201
    931662 8zgg:V (3.75) BS01 660 N/A GO:0005788 ... Q8NBJ5 40069201
    931663 8zgh:A (3.93) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931664 8zgh:A (3.93) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931665 8zgh:B (3.93) BS01 AKG N/A GO:0005506 ... O60568 40069201
    931666 8zgh:B (3.93) BS02 FE2 N/A GO:0005506 ... O60568 40069201
    931667 8zgh:U (3.93) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931668 8zgh:V (3.93) BS01 GDU N/A GO:0005788 ... Q8NBJ5 40069201
    931669 8zgo:A (2.25) BS01 HEM N/A GO:0004129 ... C6S880 N/A
    931670 8zgo:A (2.25) BS02 HEM N/A GO:0004129 ... C6S880 N/A
    931671 8zgo:A (2.25) BS03 FE N/A GO:0004129 ... C6S880 N/A
    931672 8zgo:A (2.25) BS04 CA N/A GO:0004129 ... C6S880 N/A
    931673 8zgp:A (1.89) BS01 HEM N/A GO:0004129 ... C6S880 N/A
    931674 8zgp:A (1.89) BS02 HEM N/A GO:0004129 ... C6S880 N/A
    931675 8zgp:A (1.89) BS03 FE N/A GO:0004129 ... C6S880 N/A
    931676 8zgp:A (1.89) BS04 CA N/A GO:0004129 ... C6S880 N/A
    931677 8zgp:B (1.89) BS01 HEM N/A GO:0004129 ... C6S880 N/A
    931678 8zgp:B (1.89) BS02 HEM N/A GO:0004129 ... C6S880 N/A
    931679 8zgp:B (1.89) BS03 FE N/A GO:0004129 ... C6S880 N/A
    931680 8zgp:B (1.89) BS04 CA N/A GO:0004129 ... C6S880 N/A
    931681 8zgr:LD (2.7) BS01 rna N/A GO:0002181 ... P0CX45 N/A
    931682 8zgr:LD (2.7) BS02 rna N/A GO:0002181 ... P0CX45 N/A
    931683 8zgr:LE (2.7) BS01 rna N/A GO:0000027 ... P14126 N/A
    931684 8zgr:LF (2.7) BS01 rna N/A GO:0002181 ... P10664 N/A
    931685 8zgr:LF (2.7) BS02 rna N/A GO:0002181 ... P10664 N/A
    931686 8zgr:LG (2.7) BS01 rna N/A GO:0000027 ... P26321 N/A
    931687 8zgr:LG (2.7) BS02 rna N/A GO:0000027 ... P26321 N/A
    931688 8zgr:LH (2.7) BS01 rna N/A GO:0000027 ... P05739 N/A
    931689 8zgr:LI (2.7) BS01 rna N/A GO:0000463 ... P05737 N/A
    931690 8zgr:LI (2.7) BS02 rna N/A GO:0000463 ... P05737 N/A
    931691 8zgr:LJ (2.7) BS01 rna N/A GO:0000470 ... P17076 N/A
    931692 8zgr:LJ (2.7) BS02 rna N/A GO:0000470 ... P17076 N/A
    931693 8zgr:LK (2.7) BS01 rna N/A GO:0002181 ... P05738 N/A
    931694 8zgr:LL (2.7) BS01 rna N/A GO:0000027 ... P41805 N/A
    931695 8zgr:LL (2.7) BS02 rna N/A GO:0000027 ... P41805 N/A
    931696 8zgr:LL (2.7) BS03 rna N/A GO:0000027 ... P41805 N/A
    931697 8zgr:LM (2.7) BS01 rna N/A GO:0000027 ... Q3E757 N/A
    931698 8zgr:LM (2.7) BS02 rna N/A GO:0000027 ... Q3E757 N/A
    931699 8zgr:LN (2.7) BS01 rna N/A GO:0002181 ... Q12690 N/A
    931700 8zgr:LN (2.7) BS02 rna N/A GO:0002181 ... Q12690 N/A
    931701 8zgr:LO (2.7) BS01 rna N/A GO:0000027 ... P36105 N/A
    931702 8zgr:LP (2.7) BS01 rna N/A GO:0000470 ... P05748 N/A
    931703 8zgr:LP (2.7) BS02 rna N/A GO:0000470 ... P05748 N/A
    931704 8zgr:LQ (2.7) BS01 rna N/A GO:0000470 ... P26784 N/A
    931705 8zgr:LR (2.7) BS01 rna N/A GO:0000448 ... P05740 N/A
    931706 8zgr:LR (2.7) BS02 rna N/A GO:0000448 ... P05740 N/A
    931707 8zgr:LS (2.7) BS01 rna N/A GO:0002181 ... P0CX49 N/A
    931708 8zgr:LT (2.7) BS01 rna N/A GO:0002181 ... P0CX82 N/A
    931709 8zgr:LT (2.7) BS02 rna N/A GO:0002181 ... P0CX82 N/A
    931710 8zgr:LU (2.7) BS01 rna N/A GO:0002181 ... P0CX23 N/A
    931711 8zgr:LU (2.7) BS02 rna N/A GO:0002181 ... P0CX23 N/A
    931712 8zgr:LV (2.7) BS01 rna N/A GO:0002181 ... Q02753 N/A
    931713 8zgr:LV (2.7) BS02 rna N/A GO:0002181 ... Q02753 N/A
    931714 8zgr:LW (2.7) BS01 rna N/A GO:0003735 ... P05749 N/A
    931715 8zgr:LX (2.7) BS01 rna N/A GO:0002181 ... P0CX41 N/A
    931716 8zgr:LX (2.7) BS02 rna N/A GO:0002181 ... P0CX41 N/A
    931717 8zgr:LY (2.7) BS01 rna N/A GO:0003735 ... P04449 N/A
    931718 8zgr:LZ (2.7) BS01 rna N/A GO:0003735 ... P04456 N/A
    931719 8zgr:LZ (2.7) BS02 rna N/A GO:0003735 ... P04456 N/A
    931720 8zgr:La (2.7) BS01 rna N/A GO:0002181 ... P05743 N/A
    931721 8zgr:La (2.7) BS02 rna N/A GO:0002181 ... P05743 N/A
    931722 8zgr:Lb (2.7) BS01 rna N/A GO:0002181 ... P0C2H6 N/A
    931723 8zgr:Lc (2.7) BS01 rna N/A GO:0002181 ... P02406 N/A
    931724 8zgr:Ld (2.7) BS01 rna N/A GO:0002181 ... P05747 N/A
    931725 8zgr:Le (2.7) BS01 rna N/A GO:0002181 ... P14120 N/A
    931726 8zgr:Lf (2.7) BS01 rna N/A GO:0002181 ... P0C2H8 N/A
    931727 8zgr:Lg (2.7) BS01 rna N/A GO:0002181 ... P38061 N/A
    931728 8zgr:Lh (2.7) BS01 rna N/A GO:0000027 ... P05744 N/A
    931729 8zgr:Li (2.7) BS01 rna N/A GO:0002181 ... P87262 N/A
    931730 8zgr:Lj (2.7) BS01 rna N/A GO:0000463 ... P0CX84 N/A
    931731 8zgr:Lj (2.7) BS02 rna N/A GO:0000463 ... P0CX84 N/A
    931732 8zgr:Lk (2.7) BS01 rna N/A GO:0000470 ... P05745 N/A
    931733 8zgr:Ll (2.7) BS01 rna N/A GO:0000448 ... P49166 N/A
    931734 8zgr:Ll (2.7) BS02 rna N/A GO:0000448 ... P49166 N/A
    931735 8zgr:Lm (2.7) BS01 rna N/A GO:0002181 ... P49167 N/A
    931736 8zgr:Ln (2.7) BS01 rna N/A GO:0002181 ... P04650 N/A
    931737 8zgr:Ln (2.7) BS02 rna N/A GO:0002181 ... P04650 N/A
    931738 8zgr:Lo (2.7) BS01 rna N/A GO:0003735 ... P0CH08 N/A
    931739 8zgr:Lq (2.7) BS01 rna N/A GO:0002181 ... P0CX27 N/A
    931740 8zgr:Lr (2.7) BS01 rna N/A GO:0002181 ... P0CX25 N/A
    931741 8zgr:SA (2.7) BS01 rna N/A GO:0000054 ... P05750 N/A
    931742 8zgr:SB (2.7) BS01 rna N/A GO:0000054 ... P26783 N/A
    931743 8zgr:SC (2.7) BS01 rna N/A N/A Q08745 N/A
    931744 8zgr:SD (2.7) BS01 rna N/A GO:0003735 ... P48589 N/A
    931745 8zgr:SE (2.7) BS01 rna N/A GO:0003723 ... Q01855 N/A
    931746 8zgr:SF (2.7) BS01 rna N/A GO:0000462 ... P0CX51 N/A
    931747 8zgr:SG (2.7) BS01 rna N/A GO:0000028 ... P02407 N/A
    931748 8zgr:SH (2.7) BS01 rna N/A GO:0000054 ... P0CX55 N/A
    931749 8zgr:SI (2.7) BS01 rna N/A GO:0000054 ... P07280 N/A
    931750 8zgr:SJ (2.7) BS01 rna N/A GO:0003723 ... P38701 N/A
    931751 8zgr:SK (2.7) BS01 rna N/A N/A Q3E792 N/A
    931752 8zgr:SL (2.7) BS01 rna N/A GO:0000028 ... Q3E7X9 N/A
    931753 8zgr:SM (2.7) BS01 rna N/A GO:0002181 ... P41057 N/A
    931754 8zgr:SN (2.7) BS01 rna N/A GO:0003735 ... P05759 N/A
    931755 8zgr:SO (2.7) BS01 rna N/A GO:0001965 ... P38011 N/A
    931756 8zgr:SP (2.7) BS01 rna N/A GO:0003735 ... P32905 N/A
    931757 8zgr:SQ (2.7) BS01 rna N/A GO:0000462 ... P33442 N/A
    931758 8zgr:SR (2.7) BS01 rna N/A GO:0003723 ... P25443 N/A
    931759 8zgr:SS (2.7) BS01 rna N/A GO:0002181 ... P0CX35 N/A
    931760 8zgr:ST (2.7) BS01 rna N/A GO:0000462 ... P0CX37 N/A
    931761 8zgr:SU (2.7) BS01 rna N/A GO:0002181 ... P26786 N/A
    931762 8zgr:SV (2.7) BS01 rna N/A GO:0000462 ... P0CX39 N/A
    931763 8zgr:SV (2.7) BS02 rna N/A GO:0000462 ... P0CX39 N/A
    931764 8zgr:SW (2.7) BS01 rna N/A GO:0000462 ... O13516 N/A
    931765 8zgr:SX (2.7) BS01 rna N/A GO:0000028 ... P0CX47 N/A
    931766 8zgr:SY (2.7) BS01 rna N/A GO:0000462 ... P05756 N/A
    931767 8zgr:SY (2.7) BS02 rna N/A GO:0000462 ... P05756 N/A
    931768 8zgr:SZ (2.7) BS01 rna N/A GO:0000028 ... P39516 N/A
    931769 8zgr:Sa (2.7) BS01 rna N/A GO:0000447 ... P0C0V8 N/A
    931770 8zgr:Sb (2.7) BS01 rna N/A GO:0002181 ... P0C0W1 N/A
    931771 8zgr:Sc (2.7) BS01 rna N/A GO:0000462 ... P0CX29 N/A
    931772 8zgr:Sd (2.7) BS01 rna N/A GO:0000462 ... P0CX31 N/A
    931773 8zgr:Se (2.7) BS01 rna N/A GO:0003735 ... P39939 N/A
    931774 8zgr:Sf (2.7) BS01 rna N/A GO:0000028 ... P35997 N/A
    931775 8zgr:Sg (2.7) BS01 rna N/A GO:0002181 ... P0CX33 N/A
    931776 8zgs:B (3.04) BS01 Y01 N/A GO:0005768 ... P13386 39169187
    931777 8zgt:B (2.96) BS01 Y01 N/A GO:0005768 ... P13386 39169187
    931778 8zgv:A (1.8) BS01 FPP N/A N/A A0A2P2GK84 N/A
    931779 8zgv:A (1.8) BS02 MG N/A N/A A0A2P2GK84 N/A
    931780 8zgv:A (1.8) BS03 MG N/A N/A A0A2P2GK84 N/A
    931781 8zgw:A (2.23) BS01 FPP N/A N/A A0A2P2GK84 N/A
    931782 8zgw:A (2.23) BS02 MG N/A N/A A0A2P2GK84 N/A
    931783 8zgy:LD (2.8) BS01 rna N/A GO:0002181 ... P0CX45 N/A
    931784 8zgy:LD (2.8) BS02 rna N/A GO:0002181 ... P0CX45 N/A
    931785 8zgy:LE (2.8) BS01 rna N/A GO:0000027 ... P14126 N/A
    931786 8zgy:LF (2.8) BS01 rna N/A GO:0002181 ... P10664 N/A
    931787 8zgy:LF (2.8) BS02 rna N/A GO:0002181 ... P10664 N/A
    931788 8zgy:LG (2.8) BS01 rna N/A GO:0000027 ... P26321 N/A
    931789 8zgy:LG (2.8) BS02 rna N/A GO:0000027 ... P26321 N/A
    931790 8zgy:LH (2.8) BS01 rna N/A GO:0000027 ... P05739 N/A
    931791 8zgy:LI (2.8) BS01 rna N/A GO:0000463 ... P05737 N/A
    931792 8zgy:LI (2.8) BS02 rna N/A GO:0000463 ... P05737 N/A
    931793 8zgy:LJ (2.8) BS01 rna N/A GO:0000470 ... P17076 N/A
    931794 8zgy:LJ (2.8) BS02 rna N/A GO:0000470 ... P17076 N/A
    931795 8zgy:LK (2.8) BS01 rna N/A GO:0002181 ... P05738 N/A
    931796 8zgy:LL (2.8) BS01 rna N/A GO:0000027 ... P41805 N/A
    931797 8zgy:LL (2.8) BS02 rna N/A GO:0000027 ... P41805 N/A
    931798 8zgy:LM (2.8) BS01 rna N/A GO:0000027 ... P0C0W9 N/A
    931799 8zgy:LM (2.8) BS02 rna N/A GO:0000027 ... P0C0W9 N/A
    931800 8zgy:LN (2.8) BS01 rna N/A GO:0002181 ... Q12690 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).