SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    93001 2jd7:J (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93002 2jd7:K (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93003 2jd7:K (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93004 2jd7:K (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93005 2jd7:L (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93006 2jd7:L (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93007 2jd7:L (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93008 2jd7:M (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93009 2jd7:M (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93010 2jd7:M (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93011 2jd7:N (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93012 2jd7:N (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93013 2jd7:N (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93014 2jd7:O (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93015 2jd7:O (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93016 2jd7:O (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93017 2jd7:P (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93018 2jd7:P (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93019 2jd7:P (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93020 2jd7:Q (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93021 2jd7:Q (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93022 2jd7:Q (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93023 2jd7:R (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93024 2jd7:R (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93025 2jd7:R (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93026 2jd7:S (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93027 2jd7:S (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93028 2jd7:S (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93029 2jd7:T (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93030 2jd7:T (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93031 2jd7:T (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93032 2jd7:U (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93033 2jd7:U (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93034 2jd7:U (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93035 2jd7:V (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93036 2jd7:V (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93037 2jd7:V (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93038 2jd7:W (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93039 2jd7:W (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93040 2jd7:W (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93041 2jd7:X (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93042 2jd7:X (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93043 2jd7:X (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93044 2jd7:Y (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93045 2jd7:Y (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93046 2jd7:Y (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93047 2jd7:Z (2.8) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    93048 2jd7:Z (2.8) BS02 FE ? GO:0004322 ... Q8U2T8 17541801
    93049 2jd7:Z (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93050 2jd8:0 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93051 2jd8:0 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93052 2jd8:0 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93053 2jd8:1 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93054 2jd8:1 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93055 2jd8:1 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93056 2jd8:2 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93057 2jd8:2 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93058 2jd8:2 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93059 2jd8:3 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93060 2jd8:3 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93061 2jd8:3 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93062 2jd8:4 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93063 2jd8:4 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93064 2jd8:4 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93065 2jd8:5 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93066 2jd8:5 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93067 2jd8:5 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93068 2jd8:6 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93069 2jd8:6 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93070 2jd8:6 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93071 2jd8:7 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93072 2jd8:7 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93073 2jd8:7 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93074 2jd8:8 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93075 2jd8:8 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93076 2jd8:8 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93077 2jd8:9 (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93078 2jd8:9 (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93079 2jd8:9 (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93080 2jd8:A (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93081 2jd8:A (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93082 2jd8:A (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93083 2jd8:B (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93084 2jd8:B (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93085 2jd8:B (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93086 2jd8:C (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93087 2jd8:C (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93088 2jd8:C (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93089 2jd8:D (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93090 2jd8:D (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93091 2jd8:D (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93092 2jd8:E (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93093 2jd8:E (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93094 2jd8:E (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93095 2jd8:F (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93096 2jd8:F (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93097 2jd8:F (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93098 2jd8:G (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93099 2jd8:G (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93100 2jd8:G (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93101 2jd8:H (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93102 2jd8:H (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93103 2jd8:H (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93104 2jd8:I (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93105 2jd8:I (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93106 2jd8:I (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93107 2jd8:J (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93108 2jd8:J (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93109 2jd8:J (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93110 2jd8:K (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93111 2jd8:K (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93112 2jd8:K (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93113 2jd8:L (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93114 2jd8:L (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93115 2jd8:L (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93116 2jd8:M (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93117 2jd8:M (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93118 2jd8:M (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93119 2jd8:N (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93120 2jd8:N (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93121 2jd8:N (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93122 2jd8:O (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93123 2jd8:O (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93124 2jd8:O (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93125 2jd8:P (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93126 2jd8:P (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93127 2jd8:P (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93128 2jd8:Q (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93129 2jd8:Q (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93130 2jd8:Q (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93131 2jd8:R (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93132 2jd8:R (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93133 2jd8:R (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93134 2jd8:S (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93135 2jd8:S (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93136 2jd8:S (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93137 2jd8:T (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93138 2jd8:T (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93139 2jd8:T (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93140 2jd8:U (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93141 2jd8:U (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93142 2jd8:U (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93143 2jd8:V (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93144 2jd8:V (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93145 2jd8:V (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93146 2jd8:W (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93147 2jd8:W (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93148 2jd8:W (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93149 2jd8:X (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93150 2jd8:X (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93151 2jd8:X (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93152 2jd8:Y (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93153 2jd8:Y (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93154 2jd8:Y (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93155 2jd8:Z (2.8) BS01 ZN ? GO:0004322 ... Q8U2T8 17541801
    93156 2jd8:Z (2.8) BS02 ZN ? GO:0004322 ... Q8U2T8 17541801
    93157 2jd8:Z (2.8) BS03 FE ? GO:0004322 ... Q8U2T8 17541801
    93158 2jd9:A (1.8) BS01 CA ? N/A A1JSS7 17292916
    93159 2jda:A (1.35) BS01 CA ? N/A A1JSS7 17292916
    93160 2jda:B (1.35) BS01 CA ? N/A A1JSS7 17292916
    93161 2jdc:A (1.6) BS01 CAO ? GO:0016747 ... Q65LG7 17272278 MOAD: Ki=9uM
    93162 2jdd:A (1.6) BS01 ACO ? GO:0016747 ... Q65LG7 17272278
    93163 2jdh:A (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93164 2jdh:A (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93165 2jdh:A (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93166 2jdh:B (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93167 2jdh:B (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93168 2jdh:B (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93169 2jdh:C (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93170 2jdh:C (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93171 2jdh:C (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93172 2jdh:D (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93173 2jdh:D (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93174 2jdh:D (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93175 2jdi:A (1.9) BS01 ANP 3.6.3.14 GO:0005515 ... P19483 17350959
    93176 2jdi:B (1.9) BS01 ANP 3.6.3.14 GO:0005515 ... P19483 17350959
    93177 2jdi:C (1.9) BS01 ANP 3.6.3.14 GO:0005515 ... P19483 17350959
    93178 2jdi:C (1.9) BS02 ANP 3.6.3.14 GO:0005515 ... P19483 17350959
    93179 2jdi:D (1.9) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 17350959
    93180 2jdi:F (1.9) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 17350959
    93181 2jdi:G (1.9) BS01 peptide 3.6.1.34 GO:0005515 ... P05631 17350959
    93182 2jdi:H (1.9) BS01 peptide 3.6.1.34 GO:0015986 ... P05630 17350959
    93183 2jdk:A (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93184 2jdk:A (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93185 2jdk:A (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93186 2jdk:B (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93187 2jdk:B (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93188 2jdk:B (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93189 2jdk:C (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93190 2jdk:C (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93191 2jdk:C (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93192 2jdk:D (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286
    93193 2jdk:D (1.1) BS02 CA ? GO:0030246 ... Q9HYN5 17623286
    93194 2jdk:D (1.1) BS03 CA ? GO:0030246 ... Q9HYN5 17623286
    93195 2jdl:A (2.2) BS01 peptide 3.2.2.22 GO:0017148 ... P09989 19073700
    93196 2jdl:B (2.2) BS01 peptide 3.2.2.22 GO:0017148 ... P09989 19073700
    93197 2jdm:A (1.7) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93198 2jdm:A (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93199 2jdm:A (1.7) BS03 FUC ? GO:0030246 ... Q9HYN5 17540045
    93200 2jdm:B (1.7) BS01 CA ? GO:0030246 ... Q9HYN5 17540045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).