SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    932401 9epq:R (4.15) BS01 A1H6M N/A N/A B1B1U5 39414813
    932402 9epr:R (4.9) BS01 RET N/A GO:0004930 ... B1B1U5 39414813
    932403 9epv:A (2.3) BS01 A1H6H 2.7.11.1 GO:0004672 ... P68400 39067440
    932404 9epv:B (2.3) BS01 A1H6H 2.7.11.1 GO:0004672 ... P68400 39067440
    932405 9epw:B (2.3) BS01 A1H6F 2.7.11.1 GO:0004672 ... P68400 39067440
    932406 9epx:A (2.6) BS01 A1H6E 2.7.11.1 GO:0004672 ... P68400 N/A
    932407 9epx:B (2.6) BS01 A1H6E 2.7.11.1 GO:0004672 ... P68400 N/A
    932408 9epy:A (2.65) BS01 A1H6G 2.7.11.1 GO:0004672 ... P68400 39067440
    932409 9epy:B (2.65) BS01 A1H6G 2.7.11.1 GO:0004672 ... P68400 39067440
    932410 9epz:A (2.65) BS01 A1H6I 2.7.11.1 GO:0004672 ... P68400 39067440
    932411 9epz:B (2.65) BS01 A1H6I 2.7.11.1 GO:0004672 ... P68400 39067440
    932412 9eq0:A (3.15) BS01 A1H6D 2.7.11.1 GO:0004672 ... P68400 39067440
    932413 9eq0:B (3.15) BS01 A1H6D 2.7.11.1 GO:0004672 ... P68400 39067440
    932414 9eq1:A (3.0) BS01 A1H6J 2.7.11.1 GO:0004672 ... P68400 39067440
    932415 9eq1:B (3.0) BS01 A1H6J 2.7.11.1 GO:0004672 ... P68400 39067440
    932416 9eq2:A (3.68) BS01 ADP N/A N/A Q9FMR9 N/A
    932417 9eq2:B (3.68) BS01 ADP N/A N/A Q9FMR9 N/A
    932418 9eq2:C (3.68) BS01 ADP N/A N/A Q9FMR9 N/A
    932419 9eq5:A (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    932420 9eq5:A (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    932421 9eq5:B (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    932422 9eq5:B (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    932423 9eq5:C (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    932424 9eq5:C (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    932425 9eq5:D (2.17) BS01 PPH N/A GO:0003824 ... F0SIS6 38713131
    932426 9eq5:D (2.17) BS02 PPH N/A GO:0003824 ... F0SIS6 38713131
    932427 9eq7:A (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932428 9eq7:A (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932429 9eq7:B (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932430 9eq7:B (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932431 9eq7:C (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932432 9eq7:C (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932433 9eq7:D (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932434 9eq7:D (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932435 9eq7:E (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932436 9eq7:E (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932437 9eq7:F (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932438 9eq7:F (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932439 9eq7:G (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932440 9eq7:G (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932441 9eq7:H (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932442 9eq7:H (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932443 9eq7:I (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932444 9eq7:I (3.23) BS02 BDP N/A GO:0005198 ... P61116 38992036
    932445 9eq7:I (3.23) BS03 BGC N/A GO:0005198 ... P61116 38992036
    932446 9eq7:J (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932447 9eq7:J (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932448 9eq7:K (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932449 9eq7:K (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932450 9eq7:L (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932451 9eq7:L (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932452 9eq7:M (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932453 9eq7:M (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932454 9eq7:N (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932455 9eq7:N (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932456 9eq7:O (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932457 9eq7:O (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932458 9eq7:P (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932459 9eq7:P (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932460 9eq7:Q (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932461 9eq7:Q (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932462 9eq7:R (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932463 9eq7:R (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932464 9eq7:S (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932465 9eq7:S (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932466 9eq7:T (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932467 9eq7:T (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932468 9eq7:U (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932469 9eq7:U (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932470 9eq7:V (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932471 9eq7:V (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932472 9eq7:W (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932473 9eq7:W (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932474 9eq7:X (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932475 9eq7:X (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932476 9eq7:Y (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932477 9eq7:Y (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932478 9eq7:Z (3.23) BS01 BGC N/A GO:0005198 ... P61116 38992036
    932479 9eq7:Z (3.23) BS02 BGC N/A GO:0005198 ... P61116 38992036
    932480 9eqf:A (1.6) BS01 FE2 N/A GO:0005506 ... Q6WZB0 39114090
    932481 9eqf:A (1.6) BS02 ARG N/A GO:0005506 ... Q6WZB0 39114090
    932482 9eqg:A (2.4) BS01 PGW N/A GO:0004888 ... P14867 39261733
    932483 9eqg:A (2.4) BS02 PT5 N/A GO:0004888 ... P14867 39261733
    932484 9eqg:A (2.4) BS03 ABU N/A GO:0004888 ... P14867 39261733
    932485 9eqg:B (2.4) BS01 ABU N/A GO:0004888 ... P28472 39261733
    932486 9eqg:C (2.4) BS01 MAN N/A GO:0004888 ... P18507 39261733
    932487 9eqg:C (2.4) BS02 A1H6W N/A GO:0004888 ... P18507 39261733
    932488 9eqg:D (2.4) BS01 MAN N/A GO:0004888 ... P14867 39261733
    932489 9eqg:D (2.4) BS02 PGW N/A GO:0004888 ... P14867 39261733
    932490 9eqg:D (2.4) BS03 A1H6W N/A GO:0004888 ... P14867 39261733
    932491 9eqg:D (2.4) BS04 PT5 N/A GO:0004888 ... P14867 39261733
    932492 9eqg:E (2.4) BS01 PGW N/A GO:0004888 ... P28472 39261733
    932493 9eqg:E (2.4) BS02 ABU N/A GO:0004888 ... P28472 39261733
    932494 9eqj:C (2.05) BS01 A1H6O N/A N/A P40337 38942127
    932495 9eqj:F (2.05) BS01 A1H6O N/A N/A P40337 38942127
    932496 9eqm:C (2.19) BS01 A1H9F N/A N/A P40337 38942127
    932497 9er2:A (3.3) BS01 rna N/A GO:0000428 ... A0A7M4DUC2 39547229
    932498 9er2:A (3.3) BS02 dna N/A GO:0000428 ... A0A7M4DUC2 39547229
    932499 9er2:A (3.3) BS03 dna N/A GO:0000428 ... A0A7M4DUC2 39547229
    932500 9er2:A (3.3) BS04 ZN N/A GO:0000428 ... A0A7M4DUC2 39547229
    932501 9er2:A (3.3) BS05 ZN N/A GO:0000428 ... A0A7M4DUC2 39547229
    932502 9er2:A (3.3) BS06 MG N/A GO:0000428 ... A0A7M4DUC2 39547229
    932503 9er2:B (3.3) BS01 rna N/A GO:0000428 ... I3LGP4 39547229
    932504 9er2:B (3.3) BS02 dna N/A GO:0000428 ... I3LGP4 39547229
    932505 9er2:B (3.3) BS03 ZN N/A GO:0000428 ... I3LGP4 39547229
    932506 9er2:C (3.3) BS01 ZN N/A GO:0000428 ... I3LCH3 39547229
    932507 9er2:E (3.3) BS01 dna N/A GO:0001054 ... I3LSI7 39547229
    932508 9er2:E (3.3) BS02 dna N/A GO:0001054 ... I3LSI7 39547229
    932509 9er2:I (3.3) BS01 ZN N/A GO:0000428 ... P60899 39547229
    932510 9er2:I (3.3) BS02 ZN N/A GO:0000428 ... P60899 39547229
    932511 9er2:J (3.3) BS01 ZN N/A GO:0000428 ... A0A8W4F9W9 39547229
    932512 9er2:L (3.3) BS01 ZN N/A GO:0005634 ... A0A4X1TRS6 39547229
    932513 9er2:O (3.3) BS01 ZN N/A N/A P60002 39547229
    932514 9er2:b (3.3) BS01 dna N/A GO:0000012 ... Q03468 39547229
    932515 9er2:b (3.3) BS02 dna N/A GO:0000012 ... Q03468 39547229
    932516 9er2:b (3.3) BS03 ADP N/A GO:0000012 ... Q03468 39547229
    932517 9er2:b (3.3) BS04 BEF N/A GO:0000012 ... Q03468 39547229
    932518 9er2:c (3.3) BS01 ZN N/A GO:0000993 ... Q2YD98 39547229
    932519 9er2:c (3.3) BS02 ZN N/A GO:0000993 ... Q2YD98 39547229
    932520 9erd:A (3.72) BS01 ATP N/A N/A Q7Z7L1 39627193
    932521 9erd:A (3.72) BS02 MG N/A N/A Q7Z7L1 39627193
    932522 9erd:A (3.72) BS03 ZN N/A N/A Q7Z7L1 39627193
    932523 9ere:A (2.82) BS01 rna N/A N/A Q7Z7L1 39627193
    932524 9ere:A (2.82) BS02 ZN N/A N/A Q7Z7L1 39627193
    932525 9ere:A (2.82) BS03 MN N/A N/A Q7Z7L1 39627193
    932526 9ere:B (2.82) BS01 rna N/A N/A Q7Z7L1 39627193
    932527 9ere:B (2.82) BS02 rna N/A N/A Q7Z7L1 39627193
    932528 9ere:B (2.82) BS03 ZN N/A N/A Q7Z7L1 39627193
    932529 9ere:B (2.82) BS04 MN N/A N/A Q7Z7L1 39627193
    932530 9ere:B (2.82) BS05 MN N/A N/A Q7Z7L1 39627193
    932531 9erf:A (2.64) BS01 rna N/A N/A Q7Z7L1 39627193
    932532 9erf:A (2.64) BS02 ZN N/A N/A Q7Z7L1 39627193
    932533 9erf:A (2.64) BS03 MN N/A N/A Q7Z7L1 39627193
    932534 9erf:B (2.64) BS01 rna N/A N/A Q7Z7L1 39627193
    932535 9erf:B (2.64) BS02 ZN N/A N/A Q7Z7L1 39627193
    932536 9erf:B (2.64) BS03 MN N/A N/A Q7Z7L1 39627193
    932537 9erv:A (2.253) BS01 ATP N/A N/A A0A1B0VBT5 39415022
    932538 9erx:R (2.9) BS01 A1H66 N/A GO:0002866 ... P21554 38826401
    932539 9ery:A (2.7) BS01 VVH N/A N/A Q9NZQ7 39032403
    932540 9ery:B (2.7) BS01 VVH N/A N/A Q9NZQ7 39032403
    932541 9es7:A (1.94) BS01 peptide N/A GO:0009507 ... P00165 39362993
    932542 9es7:A (1.94) BS02 HEM N/A GO:0009507 ... P00165 39362993
    932543 9es7:A (1.94) BS03 HEM N/A GO:0009507 ... P00165 39362993
    932544 9es7:A (1.94) BS04 HEC N/A GO:0009507 ... P00165 39362993
    932545 9es7:B (1.94) BS01 peptide N/A GO:0009507 ... P00166 39362993
    932546 9es7:B (1.94) BS02 CLA N/A GO:0009507 ... P00166 39362993
    932547 9es7:C (1.94) BS01 peptide N/A N/A P16013 39362993
    932548 9es7:C (1.94) BS02 HEC N/A N/A P16013 39362993
    932549 9es7:D (1.94) BS01 FES N/A GO:0005886 ... P08980 39362993
    932550 9es7:E (1.94) BS01 peptide N/A GO:0009507 ... Q9M3L0 39362993
    932551 9es7:F (1.94) BS01 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932552 9es7:F (1.94) BS02 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932553 9es7:G (1.94) BS01 peptide N/A GO:0009507 ... P69461 39362993
    932554 9es7:I (1.94) BS01 peptide N/A GO:0009507 ... P00165 39362993
    932555 9es7:I (1.94) BS02 peptide N/A GO:0009507 ... P00165 39362993
    932556 9es7:I (1.94) BS03 HEM N/A GO:0009507 ... P00165 39362993
    932557 9es7:I (1.94) BS04 HEM N/A GO:0009507 ... P00165 39362993
    932558 9es7:I (1.94) BS05 HEC N/A GO:0009507 ... P00165 39362993
    932559 9es7:J (1.94) BS01 peptide N/A GO:0009507 ... P00166 39362993
    932560 9es7:J (1.94) BS02 CLA N/A GO:0009507 ... P00166 39362993
    932561 9es7:K (1.94) BS01 peptide N/A N/A P16013 39362993
    932562 9es7:K (1.94) BS02 HEC N/A N/A P16013 39362993
    932563 9es7:L (1.94) BS01 FES N/A GO:0005886 ... P08980 39362993
    932564 9es7:M (1.94) BS01 peptide N/A GO:0009507 ... Q9M3L0 39362993
    932565 9es7:N (1.94) BS01 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932566 9es7:N (1.94) BS02 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932567 9es7:O (1.94) BS01 peptide N/A GO:0009507 ... P69461 39362993
    932568 9es8:A (2.24) BS01 peptide N/A GO:0009507 ... P00165 39362993
    932569 9es8:A (2.24) BS02 peptide N/A GO:0009507 ... P00165 39362993
    932570 9es8:A (2.24) BS03 HEM N/A GO:0009507 ... P00165 39362993
    932571 9es8:A (2.24) BS04 HEM N/A GO:0009507 ... P00165 39362993
    932572 9es8:A (2.24) BS05 HEC N/A GO:0009507 ... P00165 39362993
    932573 9es8:B (2.24) BS01 peptide N/A GO:0009507 ... P00166 39362993
    932574 9es8:B (2.24) BS02 CLA N/A GO:0009507 ... P00166 39362993
    932575 9es8:C (2.24) BS01 HEC N/A N/A P16013 39362993
    932576 9es8:D (2.24) BS01 FES N/A GO:0005886 ... P08980 39362993
    932577 9es8:E (2.24) BS01 peptide N/A GO:0009507 ... Q9M3L0 39362993
    932578 9es8:F (2.24) BS01 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932579 9es8:G (2.24) BS01 peptide N/A GO:0009507 ... P69461 39362993
    932580 9es8:I (2.24) BS01 peptide N/A GO:0009507 ... P00165 39362993
    932581 9es8:I (2.24) BS02 peptide N/A GO:0009507 ... P00165 39362993
    932582 9es8:I (2.24) BS03 HEM N/A GO:0009507 ... P00165 39362993
    932583 9es8:I (2.24) BS04 HEM N/A GO:0009507 ... P00165 39362993
    932584 9es8:I (2.24) BS05 HEC N/A GO:0009507 ... P00165 39362993
    932585 9es8:J (2.24) BS01 peptide N/A GO:0009507 ... P00166 39362993
    932586 9es8:J (2.24) BS02 CLA N/A GO:0009507 ... P00166 39362993
    932587 9es8:K (2.24) BS01 HEC N/A N/A P16013 39362993
    932588 9es8:L (2.24) BS01 FES N/A GO:0005886 ... P08980 39362993
    932589 9es8:M (2.24) BS01 peptide N/A GO:0009507 ... Q9M3L0 39362993
    932590 9es8:N (2.24) BS01 peptide N/A GO:0016020 ... A0A9R0IV89 39362993
    932591 9es8:O (2.24) BS01 peptide N/A GO:0009507 ... P69461 39362993
    932592 9es9:A (2.33) BS01 peptide N/A GO:0009507 ... P00165 39362993
    932593 9es9:A (2.33) BS02 peptide N/A GO:0009507 ... P00165 39362993
    932594 9es9:A (2.33) BS03 HEM N/A GO:0009507 ... P00165 39362993
    932595 9es9:A (2.33) BS04 HEM N/A GO:0009507 ... P00165 39362993
    932596 9es9:A (2.33) BS05 HEC N/A GO:0009507 ... P00165 39362993
    932597 9es9:B (2.33) BS01 peptide N/A GO:0009507 ... P00166 39362993
    932598 9es9:B (2.33) BS02 BNT N/A GO:0009507 ... P00166 39362993
    932599 9es9:B (2.33) BS03 CLA N/A GO:0009507 ... P00166 39362993
    932600 9es9:C (2.33) BS01 HEC N/A N/A P16013 39362993

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).