SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    933201 8zn7:C (2.54) BS01 ANP N/A GO:0000287 ... N/A N/A
    933202 8zn7:C (2.54) BS02 ANP N/A GO:0000287 ... N/A N/A
    933203 8zn7:C (2.54) BS03 ANP N/A GO:0000287 ... N/A N/A
    933204 8zn7:C (2.54) BS04 ANP N/A GO:0000287 ... N/A N/A
    933205 8zn7:D (2.54) BS01 ANP N/A GO:0000287 ... N/A N/A
    933206 8zn7:D (2.54) BS02 ANP N/A GO:0000287 ... N/A N/A
    933207 8zn7:D (2.54) BS03 ANP N/A GO:0000287 ... N/A N/A
    933208 8zn7:D (2.54) BS04 ANP N/A GO:0000287 ... N/A N/A
    933209 8zn7:E (2.54) BS01 ANP N/A GO:0000287 ... N/A N/A
    933210 8zn7:E (2.54) BS02 ANP N/A GO:0000287 ... N/A N/A
    933211 8zn7:E (2.54) BS03 ANP N/A GO:0000287 ... N/A N/A
    933212 8zn7:E (2.54) BS04 ANP N/A GO:0000287 ... N/A N/A
    933213 8zn7:E (2.54) BS05 MG N/A GO:0000287 ... N/A N/A
    933214 8zn7:F (2.54) BS01 ANP N/A GO:0000287 ... N/A N/A
    933215 8zn7:F (2.54) BS02 ANP N/A GO:0000287 ... N/A N/A
    933216 8zn7:F (2.54) BS03 ANP N/A GO:0000287 ... N/A N/A
    933217 8zn7:F (2.54) BS04 ANP N/A GO:0000287 ... N/A N/A
    933218 8zn8:A (2.25) BS01 MG N/A GO:0004322 ... T2B7E1 N/A
    933219 8zn8:C (2.25) BS01 MG N/A GO:0004322 ... T2B7E1 N/A
    933220 8zn8:D (2.25) BS01 MG N/A GO:0004322 ... T2B7E1 N/A
    933221 8zn8:E (2.25) BS01 MG N/A GO:0004322 ... T2B7E1 N/A
    933222 8zn8:F (2.25) BS01 MG N/A GO:0004322 ... T2B7E1 N/A
    933223 8zn9:A (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933224 8zn9:B (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933225 8zn9:C (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933226 8zn9:D (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933227 8zn9:E (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933228 8zn9:F (1.8) BS01 NAD N/A GO:0000166 ... Q167F5 41350266
    933229 8znb:A (2.53) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 39891504
    933230 8znc:A (2.41) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 39891504
    933231 8znc:A (2.41) BS02 AKG 1.4.1.3 GO:0004352 ... O74024 39891504
    933232 8znd:A (2.53) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 39891504
    933233 8zne:A (2.64) BS01 NAP N/A GO:0004352 ... O74024 39891504
    933234 8zne:A (2.64) BS02 GLU N/A GO:0004352 ... O74024 39891504
    933235 8zng:A (2.5) BS01 NDP 1.4.1.3 GO:0004352 ... O74024 39891504
    933236 8zng:A (2.5) BS02 AKG 1.4.1.3 GO:0004352 ... O74024 39891504
    933237 8znj:A (3.0) BS01 rna N/A GO:0003676 ... C4KI01 39898546
    933238 8znj:A (3.0) BS02 dna N/A GO:0003676 ... C4KI01 39898546
    933239 8znj:B (3.0) BS01 rna N/A N/A C4KI00 39898546
    933240 8znj:B (3.0) BS02 dna N/A N/A C4KI00 39898546
    933241 8znk:A (1.88) BS01 UDP N/A GO:0008194 ... A0A164WR66 40169603
    933242 8znk:B (1.88) BS01 UDP N/A GO:0008194 ... A0A164WR66 40169603
    933243 8znm:A (2.21) BS01 UPG N/A GO:0008194 ... A0A6I8WFN2 N/A
    933244 8znm:B (2.21) BS01 UPG N/A GO:0008194 ... A0A6I8WFN2 N/A
    933245 8znm:C (2.21) BS01 UPG N/A GO:0008194 ... A0A6I8WFN2 N/A
    933246 8znm:D (2.21) BS01 UPG N/A GO:0008194 ... A0A6I8WFN2 N/A
    933247 8znn:A (1.95) BS01 A1D86 N/A N/A Q03181 N/A
    933248 8zno:B (3.02) BS01 ZN N/A GO:0004222 ... A0A445CDV5 N/A
    933249 8zno:C (3.02) BS01 HEM N/A GO:0005737 ... A0A8F2YUY6 N/A
    933250 8zno:C (3.02) BS02 HEM N/A GO:0005737 ... A0A8F2YUY6 N/A
    933251 8zno:D (3.02) BS01 HEC N/A GO:0009055 ... A0A445EV57 N/A
    933252 8zno:E (3.02) BS01 FES N/A GO:0008121 ... A0A444YS04 N/A
    933253 8zno:J (3.02) BS01 peptide N/A GO:0006122 ... A0A445CQN5 N/A
    933254 8zno:N (3.02) BS01 ZN N/A GO:0004222 ... A0A445CDV5 N/A
    933255 8zno:O (3.02) BS01 HEM N/A GO:0005737 ... A0A8F2YUY6 N/A
    933256 8zno:O (3.02) BS02 HEM N/A GO:0005737 ... A0A8F2YUY6 N/A
    933257 8zno:P (3.02) BS01 HEC N/A GO:0009055 ... A0A445EV57 N/A
    933258 8zno:Q (3.02) BS01 FES N/A GO:0008121 ... A0A444YS04 N/A
    933259 8zno:V (3.02) BS01 peptide N/A GO:0006122 ... A0A445CQN5 N/A
    933260 8znr:A (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933261 8znr:A (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933262 8znr:B (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933263 8znr:B (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933264 8znr:C (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933265 8znr:C (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933266 8znr:D (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933267 8znr:D (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933268 8znr:E (2.9) BS01 dna N/A N/A A0A1K1NY43 39251884
    933269 8znr:E (2.9) BS02 rna N/A N/A A0A1K1NY43 39251884
    933270 8znr:F (2.9) BS01 dna N/A GO:0003676 ... A0A1K1NYH3 39251884
    933271 8znr:F (2.9) BS02 rna N/A GO:0003676 ... A0A1K1NYH3 39251884
    933272 8znr:G (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933273 8znr:G (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933274 8znr:H (2.9) BS01 dna N/A N/A A0A1K1P0W7 39251884
    933275 8znr:H (2.9) BS02 rna N/A N/A A0A1K1P0W7 39251884
    933276 8znr:M (2.9) BS01 rna N/A GO:0004519 ... A0A1K1NXL9 39251884
    933277 8zns:A (2.17) BS01 FE N/A GO:0003676 ... D0W8X3 39180405
    933278 8zns:A (2.17) BS02 FE N/A GO:0003676 ... D0W8X3 39180405
    933279 8znw:A (1.9) BS01 BGC N/A GO:0004553 ... G1C1T5 40592427
    933280 8znw:A (1.9) BS02 BGC N/A GO:0004553 ... G1C1T5 40592427
    933281 8zny:A (1.65) BS01 GDP N/A GO:0000281 ... P61586 N/A
    933282 8zny:A (1.65) BS02 MG N/A GO:0000281 ... P61586 N/A
    933283 8znz:A (3.06) BS01 ZN N/A GO:0000166 ... P21589 39738003
    933284 8znz:A (3.06) BS02 ZN N/A GO:0000166 ... P21589 39738003
    933285 8znz:A (3.06) BS03 CA N/A GO:0000166 ... P21589 39738003
    933286 8znz:B (3.06) BS01 ZN N/A GO:0000166 ... P21589 39738003
    933287 8znz:B (3.06) BS02 ZN N/A GO:0000166 ... P21589 39738003
    933288 8znz:B (3.06) BS03 CA N/A GO:0000166 ... P21589 39738003
    933289 8zo0:A (2.21) BS01 GNP N/A GO:0000281 ... P61586 N/A
    933290 8zo0:A (2.21) BS02 MG N/A GO:0000281 ... P61586 N/A
    933291 8zo8:5B (3.24) BS01 ZN N/A N/A Q5S3G4 41214295
    933292 8zo8:A6 (3.24) BS01 ZMP N/A N/A F1SJP6 41214295
    933293 8zo8:A9 (3.24) BS01 NDP N/A GO:0005759 ... F1SL07 41214295
    933294 8zo8:AK (3.24) BS01 ADP N/A GO:0005759 ... F1SIS9 41214295
    933295 8zo8:AL (3.24) BS01 PLX N/A GO:0005743 ... I3LGM4 41214295
    933296 8zo8:AM (3.24) BS01 PLX N/A GO:0005743 ... F1SQP4 41214295
    933297 8zo8:B5 (3.24) BS01 PLX N/A N/A F1SGC6 41214295
    933298 8zo8:B5 (3.24) BS02 6F6 N/A N/A F1SGC6 41214295
    933299 8zo8:B9 (3.24) BS01 ZMP N/A N/A K7GSE5 41214295
    933300 8zo8:BL (3.24) BS01 PLX N/A N/A A0A8D1EYI7 41214295
    933301 8zo8:C1 (3.24) BS01 HEA N/A GO:0004129 ... O79876 41214295
    933302 8zo8:C1 (3.24) BS02 HEA N/A GO:0004129 ... O79876 41214295
    933303 8zo8:C1 (3.24) BS03 CU N/A GO:0004129 ... O79876 41214295
    933304 8zo8:C1 (3.24) BS04 MG N/A GO:0004129 ... O79876 41214295
    933305 8zo8:C1 (3.24) BS05 PLX N/A GO:0004129 ... O79876 41214295
    933306 8zo8:C2 (3.24) BS01 PLX N/A GO:0004129 ... P50667 41214295
    933307 8zo8:C2 (3.24) BS02 CU N/A GO:0004129 ... P50667 41214295
    933308 8zo8:C2 (3.24) BS03 CU N/A GO:0004129 ... P50667 41214295
    933309 8zo8:CB (3.24) BS01 PLX N/A GO:0005737 ... A0A480JRW3 41214295
    933310 8zo8:N1 (3.24) BS01 PLX N/A GO:0003954 ... O79874 41214295
    933311 8zo8:N2 (3.24) BS01 PLX N/A GO:0005743 ... O79875 41214295
    933312 8zo8:N4 (3.24) BS01 PLX N/A GO:0008137 ... Q7IIB7 41214295
    933313 8zo8:N4 (3.24) BS02 PLX N/A GO:0008137 ... Q7IIB7 41214295
    933314 8zo8:N4 (3.24) BS03 PLX N/A GO:0008137 ... Q7IIB7 41214295
    933315 8zo8:N5 (3.24) BS01 PLX N/A GO:0005743 ... Q71K68 41214295
    933316 8zo8:QC (3.24) BS01 HEM N/A GO:0005739 ... Q1HBG9 41214295
    933317 8zo8:QC (3.24) BS02 HEM N/A GO:0005739 ... Q1HBG9 41214295
    933318 8zo8:QC (3.24) BS03 PLX N/A GO:0005739 ... Q1HBG9 41214295
    933319 8zo8:QC (3.24) BS04 6F6 N/A GO:0005739 ... Q1HBG9 41214295
    933320 8zo8:QD (3.24) BS01 HEC N/A N/A N/A 41214295
    933321 8zo8:QE (3.24) BS01 PLX N/A N/A A0A8D1LEN7 41214295
    933322 8zo8:QE (3.24) BS02 FES N/A N/A A0A8D1LEN7 41214295
    933323 8zo8:QI (3.24) BS01 PLX N/A GO:0005739 ... Q2EN79 41214295
    933324 8zo8:Qc (3.24) BS01 HEM N/A GO:0005739 ... Q1HBG9 41214295
    933325 8zo8:Qc (3.24) BS02 HEM N/A GO:0005739 ... Q1HBG9 41214295
    933326 8zo8:Qc (3.24) BS03 6F6 N/A GO:0005739 ... Q1HBG9 41214295
    933327 8zo8:Qd (3.24) BS01 HEC N/A N/A N/A 41214295
    933328 8zo8:Qe (3.24) BS01 PLX N/A N/A A0A8D1LEN7 41214295
    933329 8zo8:Qe (3.24) BS02 FES N/A N/A A0A8D1LEN7 41214295
    933330 8zo8:Qi (3.24) BS01 PLX N/A GO:0005739 ... Q2EN79 41214295
    933331 8zo8:S1 (3.24) BS01 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    933332 8zo8:S1 (3.24) BS02 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    933333 8zo8:S1 (3.24) BS03 FES N/A GO:0005743 ... A0A4X1V1H9 41214295
    933334 8zo8:S1 (3.24) BS04 MG N/A GO:0005743 ... A0A4X1V1H9 41214295
    933335 8zo8:S2 (3.24) BS01 SF4 N/A GO:0003954 ... F1S1A8 41214295
    933336 8zo8:S6 (3.24) BS01 ZN N/A N/A F1S031 41214295
    933337 8zo8:S7 (3.24) BS01 PLX N/A N/A A0A8D1TL60 41214295
    933338 8zo8:S7 (3.24) BS02 SF4 N/A N/A A0A8D1TL60 41214295
    933339 8zo8:S8 (3.24) BS01 SF4 N/A N/A A0A287BDC0 41214295
    933340 8zo8:S8 (3.24) BS02 SF4 N/A N/A A0A287BDC0 41214295
    933341 8zo8:V1 (3.24) BS01 SF4 N/A GO:0005743 ... A0A4X1SZP7 41214295
    933342 8zo8:V1 (3.24) BS02 FMN N/A GO:0005743 ... A0A4X1SZP7 41214295
    933343 8zo8:V2 (3.24) BS01 FES N/A N/A A0A287BG40 41214295
    933344 8zo9:1 (2.75) BS01 A1L1G N/A N/A N/A N/A
    933345 8zo9:1 (2.75) BS02 A1L1F N/A N/A N/A N/A
    933346 8zo9:1 (2.75) BS03 CLA N/A N/A N/A N/A
    933347 8zo9:1 (2.75) BS04 CLA N/A N/A N/A N/A
    933348 8zo9:1 (2.75) BS05 CLA N/A N/A N/A N/A
    933349 8zo9:1 (2.75) BS06 CLA N/A N/A N/A N/A
    933350 8zo9:1 (2.75) BS07 CLA N/A N/A N/A N/A
    933351 8zo9:1 (2.75) BS08 CLA N/A N/A N/A N/A
    933352 8zo9:1 (2.75) BS09 CLA N/A N/A N/A N/A
    933353 8zo9:1 (2.75) BS10 CLA N/A N/A N/A N/A
    933354 8zo9:1 (2.75) BS11 CLA N/A N/A N/A N/A
    933355 8zo9:1 (2.75) BS12 CLA N/A N/A N/A N/A
    933356 8zo9:1 (2.75) BS13 CLA N/A N/A N/A N/A
    933357 8zo9:2 (2.75) BS01 A1L1G N/A N/A N/A N/A
    933358 8zo9:2 (2.75) BS02 CLA N/A N/A N/A N/A
    933359 8zo9:2 (2.75) BS03 CLA N/A N/A N/A N/A
    933360 8zo9:2 (2.75) BS04 CLA N/A N/A N/A N/A
    933361 8zo9:2 (2.75) BS05 CLA N/A N/A N/A N/A
    933362 8zo9:2 (2.75) BS06 CLA N/A N/A N/A N/A
    933363 8zo9:2 (2.75) BS07 CLA N/A N/A N/A N/A
    933364 8zo9:2 (2.75) BS08 CLA N/A N/A N/A N/A
    933365 8zo9:2 (2.75) BS09 CLA N/A N/A N/A N/A
    933366 8zo9:2 (2.75) BS10 CLA N/A N/A N/A N/A
    933367 8zo9:2 (2.75) BS11 CLA N/A N/A N/A N/A
    933368 8zo9:2 (2.75) BS12 CLA N/A N/A N/A N/A
    933369 8zo9:3 (2.75) BS01 A1L1G N/A N/A N/A N/A
    933370 8zo9:3 (2.75) BS02 A1L1G N/A N/A N/A N/A
    933371 8zo9:3 (2.75) BS03 CLA N/A N/A N/A N/A
    933372 8zo9:3 (2.75) BS04 CLA N/A N/A N/A N/A
    933373 8zo9:3 (2.75) BS05 CLA N/A N/A N/A N/A
    933374 8zo9:3 (2.75) BS06 CLA N/A N/A N/A N/A
    933375 8zo9:3 (2.75) BS07 CLA N/A N/A N/A N/A
    933376 8zo9:3 (2.75) BS08 CLA N/A N/A N/A N/A
    933377 8zo9:3 (2.75) BS09 CLA N/A N/A N/A N/A
    933378 8zo9:3 (2.75) BS10 CLA N/A N/A N/A N/A
    933379 8zo9:3 (2.75) BS11 CLA N/A N/A N/A N/A
    933380 8zo9:4 (2.75) BS01 CLA N/A N/A N/A N/A
    933381 8zo9:4 (2.75) BS02 CLA N/A N/A N/A N/A
    933382 8zo9:4 (2.75) BS03 CLA N/A N/A N/A N/A
    933383 8zo9:4 (2.75) BS04 CLA N/A N/A N/A N/A
    933384 8zo9:4 (2.75) BS05 CLA N/A N/A N/A N/A
    933385 8zo9:4 (2.75) BS06 CLA N/A N/A N/A N/A
    933386 8zo9:4 (2.75) BS07 CLA N/A N/A N/A N/A
    933387 8zo9:4 (2.75) BS08 CLA N/A N/A N/A N/A
    933388 8zo9:4 (2.75) BS09 CLA N/A N/A N/A N/A
    933389 8zo9:4 (2.75) BS10 CLA N/A N/A N/A N/A
    933390 8zo9:4 (2.75) BS11 CLA N/A N/A N/A N/A
    933391 8zo9:4 (2.75) BS12 CLA N/A N/A N/A N/A
    933392 8zo9:4 (2.75) BS13 CLA N/A N/A N/A N/A
    933393 8zo9:5 (2.75) BS01 A1L1G N/A N/A N/A N/A
    933394 8zo9:5 (2.75) BS02 CLA N/A N/A N/A N/A
    933395 8zo9:5 (2.75) BS03 CLA N/A N/A N/A N/A
    933396 8zo9:5 (2.75) BS04 CLA N/A N/A N/A N/A
    933397 8zo9:5 (2.75) BS05 CLA N/A N/A N/A N/A
    933398 8zo9:5 (2.75) BS06 CLA N/A N/A N/A N/A
    933399 8zo9:5 (2.75) BS07 CLA N/A N/A N/A N/A
    933400 8zo9:5 (2.75) BS08 CLA N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).