SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    93201 2jdm:B (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93202 2jdm:B (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    93203 2jdm:C (1.7) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93204 2jdm:C (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93205 2jdm:C (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    93206 2jdm:D (1.7) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93207 2jdm:D (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93208 2jdm:D (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    93209 2jdn:A (1.3) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93210 2jdn:A (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93211 2jdn:A (1.3) BS03 FUC ? GO:0030246 ... Q9HYN5 17540045
    93212 2jdn:B (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    93213 2jdn:B (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93214 2jdn:B (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93215 2jdn:C (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    93216 2jdn:C (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93217 2jdn:C (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93218 2jdn:D (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    93219 2jdn:D (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93220 2jdn:D (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93221 2jdo:A (1.8) BS01 peptide 2.7.11.1 GO:0004672 ... P31751 17275837
    93222 2jdo:A (1.8) BS02 I5S 2.7.11.1 GO:0004672 ... P31751 17275837 MOAD: ic50=0.23uM
    BindingDB: IC50=260nM
    93223 2jdp:A (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    93224 2jdp:A (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93225 2jdp:A (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93226 2jdp:B (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    93227 2jdp:B (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93228 2jdp:B (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93229 2jdp:C (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    93230 2jdp:C (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93231 2jdp:C (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93232 2jdp:D (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    93233 2jdp:D (1.3) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93234 2jdp:D (1.3) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93235 2jdr:A (2.3) BS01 peptide 2.7.11.1 GO:0004672 ... P31751 17275837
    93236 2jdr:A (2.3) BS02 L20 2.7.11.1 GO:0004672 ... P31751 17275837 MOAD: ic50=0.5nM
    BindingDB: IC50=0.5nM
    93237 2jds:A (2.0) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 17275837
    93238 2jds:A (2.0) BS02 L20 2.7.11.11 GO:0000287 ... P00517 17275837 MOAD: Ki=6.3nM
    BindingDB: IC50=6nM
    93239 2jdt:A (2.15) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 17275837
    93240 2jdt:A (2.15) BS02 I5S 2.7.11.11 GO:0000287 ... P00517 17275837 BindingDB: IC50=170nM
    93241 2jdu:C (1.5) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93242 2jdu:C (1.5) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93243 2jdu:C (1.5) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.19uM
    93244 2jdu:D (1.5) BS01 CA ? GO:0030246 ... Q9HYN5 17540045
    93245 2jdu:D (1.5) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93246 2jdu:D (1.5) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.19uM
    93247 2jdv:A (2.08) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 17275837
    93248 2jdv:A (2.08) BS02 L20 2.7.11.11 GO:0000287 ... P00517 17275837 BindingDB: IC50=6nM
    93249 2jdy:A (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    93250 2jdy:A (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93251 2jdy:A (1.7) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93252 2jdy:B (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    93253 2jdy:B (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93254 2jdy:B (1.7) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93255 2jdy:C (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    93256 2jdy:C (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93257 2jdy:C (1.7) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93258 2jdy:D (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    93259 2jdy:D (1.7) BS02 CA ? GO:0030246 ... Q9HYN5 17540045
    93260 2jdy:D (1.7) BS03 CA ? GO:0030246 ... Q9HYN5 17540045
    93261 2jdz:A (2.1) BS01 MN ? GO:0030246 ... P81637 17937659
    93262 2jdz:A (2.1) BS02 CA ? GO:0030246 ... P81637 17937659
    93263 2jdz:A (2.1) BS03 MN ? GO:0030246 ... P81637 17937659
    93264 2jdz:A (2.1) BS04 XMM ? GO:0030246 ... P81637 17937659
    93265 2je2:A (1.8) BS01 HEC ? N/A Q50927 17583915
    93266 2je3:A (1.8) BS01 HEC ? N/A Q50927 17583915
    93267 2je4:A (1.07) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 17705484
    93268 2je4:B (1.07) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 17705484
    93269 2je5:A (2.6) BS01 L4C 2.4.1.129 GO:0008658 ... O70038 17676039
    93270 2je5:B (2.6) BS01 L4C 2.4.1.129 GO:0008658 ... O70038 17676039
    93271 2je7:A (1.65) BS01 MN ? GO:0030246 ... P81637 17937659
    93272 2je7:A (1.65) BS02 CA ? GO:0030246 ... P81637 17937659
    93273 2je7:A (1.65) BS03 XMM ? GO:0030246 ... P81637 17937659
    93274 2je9:A (2.1) BS01 CA ? GO:0030246 ... P08902 17937659
    93275 2je9:A (2.1) BS02 MN ? GO:0030246 ... P08902 17937659
    93276 2je9:A (2.1) BS03 XMM ? GO:0030246 ... P08902 17937659
    93277 2je9:B (2.1) BS01 CA ? GO:0030246 ... P08902 17937659
    93278 2je9:B (2.1) BS02 MN ? GO:0030246 ... P08902 17937659
    93279 2je9:B (2.1) BS03 XMM ? GO:0030246 ... P08902 17937659
    93280 2je9:C (2.1) BS01 CA ? GO:0030246 ... P08902 17937659
    93281 2je9:C (2.1) BS02 MN ? GO:0030246 ... P08902 17937659
    93282 2je9:C (2.1) BS03 XMM ? GO:0030246 ... P08902 17937659
    93283 2je9:D (2.1) BS01 CA ? GO:0030246 ... P08902 17937659
    93284 2je9:D (2.1) BS02 MN ? GO:0030246 ... P08902 17937659
    93285 2je9:D (2.1) BS03 XMM ? GO:0030246 ... P08902 17937659
    93286 2jea:A (2.33) BS01 rna 3.1.13.- GO:0000177 ... Q9UXC0 17380186
    93287 2jea:B (2.33) BS01 rna 3.1.13.- GO:0000175 ... Q9UXC2 17380186
    93288 2jec:A (2.0) BS01 CA ? GO:0030246 ... P08902 17937659
    93289 2jec:A (2.0) BS02 MN ? GO:0030246 ... P08902 17937659
    93290 2jec:A (2.0) BS03 XMM ? GO:0030246 ... P08902 17937659
    93291 2jec:B (2.0) BS01 CA ? GO:0030246 ... P08902 17937659
    93292 2jec:B (2.0) BS02 MN ? GO:0030246 ... P08902 17937659
    93293 2jec:B (2.0) BS03 XMM ? GO:0030246 ... P08902 17937659
    93294 2jec:C (2.0) BS01 CA ? GO:0030246 ... P08902 17937659
    93295 2jec:C (2.0) BS02 MN ? GO:0030246 ... P08902 17937659
    93296 2jec:C (2.0) BS03 XMM ? GO:0030246 ... P08902 17937659
    93297 2jec:C (2.0) BS04 MN ? GO:0030246 ... P08902 17937659
    93298 2jec:D (2.0) BS01 CA ? GO:0030246 ... P08902 17937659
    93299 2jec:D (2.0) BS02 MN ? GO:0030246 ... P08902 17937659
    93300 2jec:D (2.0) BS03 XMM ? GO:0030246 ... P08902 17937659
    93301 2jed:A (2.32) BS01 LG8 2.7.11.13 GO:0004672 ... Q04759 N/A
    93302 2jed:B (2.32) BS01 LG8 2.7.11.13 GO:0004672 ... Q04759 N/A
    93303 2jef:A (2.17) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93304 2jef:A (2.17) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93305 2jef:A (2.17) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93306 2jef:A (2.17) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93307 2jef:A (2.17) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93308 2jef:A (2.17) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93309 2jeg:A (2.38) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93310 2jeg:A (2.38) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93311 2jeg:A (2.38) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93312 2jeg:A (2.38) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93313 2jeg:A (2.38) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93314 2jeg:A (2.38) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93315 2jei:A (2.39) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93316 2jei:A (2.39) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93317 2jei:A (2.39) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93318 2jei:A (2.39) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93319 2jei:A (2.39) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93320 2jei:A (2.39) BS06 DGT 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93321 2jej:A (1.86) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93322 2jej:A (1.86) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93323 2jej:A (1.86) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93324 2jej:A (1.86) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93325 2jej:A (1.86) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93326 2jej:A (1.86) BS06 DGT 2.7.7.7 GO:0000287 ... Q97W02 17337730
    93327 2jen:A (1.4) BS01 GLC 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93328 2jen:A (1.4) BS02 GLC 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93329 2jen:A (1.4) BS03 XYS 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93330 2jen:A (1.4) BS04 GLC 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93331 2jen:A (1.4) BS05 GLC 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93332 2jen:A (1.4) BS06 XYS 3.2.1.4 GO:0000272 ... Q7X4S4 17376777
    93333 2jeq:A (1.94) BS01 BGC 3.2.1.151 GO:0000272 ... H9KVH3 17376777
    93334 2jeq:A (1.94) BS02 BGC 3.2.1.151 GO:0000272 ... H9KVH3 17376777
    93335 2jeq:A (1.94) BS03 XYS 3.2.1.151 GO:0000272 ... H9KVH3 17376777
    93336 2jes:A (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93337 2jes:C (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93338 2jes:E (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93339 2jes:G (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93340 2jes:I (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93341 2jes:K (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93342 2jes:M (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93343 2jes:O (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93344 2jes:Q (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93345 2jes:S (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93346 2jes:U (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93347 2jes:W (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93348 2jes:Y (3.4) BS01 CA ? GO:0019028 ... P54309 17363899
    93349 2jet:B (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P07338 17805946
    93350 2jet:C (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P07338 17805946
    93351 2jev:A (2.3) BS01 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    93352 2jev:A (2.3) BS02 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    93353 2jev:B (2.3) BS01 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    93354 2jev:B (2.3) BS02 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    93355 2jew:A (1.4) BS01 ZN 3.4.17.2 GO:0004181 ... P09955 17990866
    93356 2jew:A (1.4) BS02 ZN 3.4.17.2 GO:0004181 ... P09955 17990866
    93357 2jew:A (1.4) BS03 720 3.4.17.2 GO:0004181 ... P09955 17990866 MOAD: Ki=206nM
    BindingDB: Ki=206nM
    93358 2jey:A (2.7) BS01 HLO 3.1.1.7 GO:0001919 ... P21836 17443135
    93359 2jey:B (2.7) BS01 HLO 3.1.1.7 GO:0001919 ... P21836 17443135
    93360 2jez:A (2.6) BS01 HLO 3.1.1.7 GO:0001919 ... P21836 17443135
    93361 2jez:B (2.6) BS01 HLO 3.1.1.7 GO:0001919 ... P21836 17443135
    93362 2jez:B (2.6) BS02 HLO 3.1.1.7 GO:0001919 ... P21836 17443135
    93363 2jf0:A (2.5) BS01 HBP 3.1.1.7 GO:0001919 ... P21836 17443135
    93364 2jf0:B (2.5) BS01 HBP 3.1.1.7 GO:0001919 ... P21836 17443135
    93365 2jf1:A (2.2) BS01 peptide ? GO:0030036 ... P21333 18550856
    93366 2jf3:A (3.0) BS01 UD1 2.3.1.129 GO:0005737 ... P0A722 17434525
    93367 2jf4:A (2.2) BS01 VDM 3.2.1.28 GO:0004555 ... P13482 17455176 MOAD: Kd=7nM
    93368 2jf5:A (1.95) BS01 MG ? N/A P0CG48 19373254
    93369 2jf5:B (1.95) BS01 CO ? N/A P0CG48 19373254
    93370 2jf6:A (2.82) BS01 S55 3.2.1.105 GO:0004553 ... Q8GU20 17890378
    93371 2jf6:B (2.82) BS01 S55 3.2.1.105 GO:0004553 ... Q8GU20 17890378
    93372 2jf9:A (2.1) BS01 peptide ? N/A P03372 17283072
    93373 2jf9:A (2.1) BS02 peptide ? N/A P03372 17283072
    93374 2jf9:A (2.1) BS03 OHT ? N/A P03372 17283072 BindingDB: IC50=0.790000nM, EC50=10.3nM, Ki=5.7nM
    93375 2jf9:A (2.1) BS04 BCT ? N/A P03372 17283072
    93376 2jf9:B (2.1) BS01 peptide ? N/A P03372 17283072
    93377 2jf9:B (2.1) BS02 OHT ? N/A P03372 17283072 BindingDB: IC50=0.790000nM, EC50=10.3nM, Ki=5.7nM
    93378 2jf9:C (2.1) BS01 peptide ? N/A P03372 17283072
    93379 2jf9:C (2.1) BS02 peptide ? N/A P03372 17283072
    93380 2jf9:C (2.1) BS03 BCT ? N/A P03372 17283072
    93381 2jf9:C (2.1) BS04 OHT ? N/A P03372 17283072 BindingDB: IC50=0.790000nM, EC50=10.3nM, Ki=5.7nM
    93382 2jfa:A (2.55) BS01 peptide ? N/A P03372 17283072
    93383 2jfa:A (2.55) BS02 RAL ? N/A P03372 17283072 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    93384 2jfa:B (2.55) BS01 peptide ? N/A P03372 17283072
    93385 2jfa:B (2.55) BS02 RAL ? N/A P03372 17283072 BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    93386 2jfc:A (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93387 2jfc:A (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93388 2jfc:B (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93389 2jfc:B (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93390 2jfc:C (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93391 2jfc:C (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93392 2jfc:D (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93393 2jfc:D (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93394 2jfc:E (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93395 2jfc:E (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93396 2jfc:F (2.4) BS01 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93397 2jfc:F (2.4) BS02 CU 1.7.2.1 GO:0005507 ... O68601 17503096
    93398 2jff:A (1.89) BS01 LK2 6.3.2.9 GO:0005515 ... P14900 17507028 MOAD: Ki=240uM
    BindingDB: Kd=210000nM, IC50=2.80e+5nM
    93399 2jfg:A (1.52) BS01 UMA 6.3.2.9 GO:0005515 ... P14900 17507028
    93400 2jfg:A (1.52) BS02 ADP 6.3.2.9 GO:0005515 ... P14900 17507028

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).