SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    935801 8zrl:E (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935802 8zrl:E (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935803 8zrl:F (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935804 8zrl:F (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935805 8zrl:G (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935806 8zrl:G (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935807 8zrl:H (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935808 8zrl:H (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935809 8zrl:I (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935810 8zrl:I (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935811 8zrl:J (2.6) BS01 MN N/A GO:0004022 ... I3E949 40818608
    935812 8zrl:J (2.6) BS02 APR N/A GO:0004022 ... I3E949 40818608
    935813 8zrn:A (3.25) BS01 A1D8V N/A GO:0004888 ... Q15825 40175361
    935814 8zrn:C (3.25) BS01 A1D8V N/A GO:0004888 ... Q15825 40175361
    935815 8zrn:D (3.25) BS01 A1D8V N/A GO:0004888 ... P30926 40175361
    935816 8zrp:A (3.32) BS01 NCT N/A GO:0004888 ... Q15825 40175361
    935817 8zrp:B (3.32) BS01 NCT N/A GO:0004888 ... P30926 40175361
    935818 8zrp:C (3.32) BS01 BMA N/A GO:0004888 ... Q15825 40175361
    935819 8zrp:C (3.32) BS02 NCT N/A GO:0004888 ... Q15825 40175361
    935820 8zrp:D (3.32) BS01 NCT N/A GO:0004888 ... P30926 40175361
    935821 8zrt:R (3.62) BS01 peptide N/A GO:0004930 ... P24530 39414992
    935822 8zrv:A (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935823 8zrv:A (2.55) BS02 HXC N/A GO:0003824 ... P30084 40240482
    935824 8zrv:B (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935825 8zrv:B (2.55) BS02 HXC N/A GO:0003824 ... P30084 40240482
    935826 8zrv:C (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935827 8zrv:D (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935828 8zrv:E (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935829 8zrv:E (2.55) BS02 HXC N/A GO:0003824 ... P30084 40240482
    935830 8zrv:F (2.55) BS01 HXC N/A GO:0003824 ... P30084 40240482
    935831 8zrw:A (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935832 8zrw:B (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935833 8zrw:C (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935834 8zrw:D (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935835 8zrw:E (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935836 8zrw:F (2.29) BS01 CO8 N/A GO:0003824 ... P30084 40240482
    935837 8zrx:A (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935838 8zrx:A (2.27) BS02 CAA N/A GO:0003824 ... P30084 40240482
    935839 8zrx:B (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935840 8zrx:B (2.27) BS02 CAA N/A GO:0003824 ... P30084 40240482
    935841 8zrx:C (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935842 8zrx:D (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935843 8zrx:E (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935844 8zrx:E (2.27) BS02 CAA N/A GO:0003824 ... P30084 40240482
    935845 8zrx:F (2.27) BS01 CAA N/A GO:0003824 ... P30084 40240482
    935846 8zrx:F (2.27) BS02 CAA N/A GO:0003824 ... P30084 40240482
    935847 8zry:A (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935848 8zry:A (2.23) BS02 A1D88 N/A GO:0003824 ... P30084 40240482
    935849 8zry:B (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935850 8zry:C (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935851 8zry:D (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935852 8zry:E (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935853 8zry:F (2.23) BS01 A1D88 N/A GO:0003824 ... P30084 40240482
    935854 8zry:F (2.23) BS02 A1D88 N/A GO:0003824 ... P30084 40240482
    935855 8zrz:A (1.26) BS01 GLC N/A GO:0000272 ... P36924 39288698
    935856 8zrz:A (1.26) BS02 GLC N/A GO:0000272 ... P36924 39288698
    935857 8zrz:A (1.26) BS03 GLC N/A GO:0000272 ... P36924 39288698
    935858 8zrz:A (1.26) BS04 GLC N/A GO:0000272 ... P36924 39288698
    935859 8zrz:A (1.26) BS05 BGC N/A GO:0000272 ... P36924 39288698
    935860 8zrz:A (1.26) BS06 GLC N/A GO:0000272 ... P36924 39288698
    935861 8zrz:A (1.26) BS07 GLC N/A GO:0000272 ... P36924 39288698
    935862 8zrz:A (1.26) BS08 GLC N/A GO:0000272 ... P36924 39288698
    935863 8zrz:A (1.26) BS09 GLC N/A GO:0000272 ... P36924 39288698
    935864 8zrz:A (1.26) BS10 GLC N/A GO:0000272 ... P36924 39288698
    935865 8zrz:A (1.26) BS11 CA N/A GO:0000272 ... P36924 39288698
    935866 8zrz:A (1.26) BS12 BGC N/A GO:0000272 ... P36924 39288698
    935867 8zsa:A (3.42) BS01 SAM N/A GO:0008757 ... N/A 40562929
    935868 8zsa:B (3.42) BS01 SAM N/A GO:0008757 ... N/A 40562929
    935869 8zsa:C (3.42) BS01 SAM N/A GO:0008757 ... N/A 40562929
    935870 8zsa:C (3.42) BS02 4VP N/A GO:0008757 ... N/A 40562929
    935871 8zsa:D (3.42) BS01 SAM N/A GO:0008757 ... N/A 40562929
    935872 8zsb:A (3.26) BS01 ZN N/A GO:0000139 ... Q9Y6M5 39111308
    935873 8zsb:B (3.26) BS01 ZN N/A GO:0000139 ... Q9Y6M5 39111308
    935874 8zse:A (2.8) BS01 ZN N/A GO:0006508 ... P0DTD1 N/A
    935875 8zse:A (2.8) BS02 ZN N/A GO:0006508 ... P0DTD1 N/A
    935876 8zse:A (2.8) BS03 A1L2A N/A GO:0006508 ... P0DTD1 N/A
    935877 8zse:B (2.8) BS01 ZN N/A GO:0006508 ... P0DTD1 N/A
    935878 8zse:B (2.8) BS02 ZN N/A GO:0006508 ... P0DTD1 N/A
    935879 8zse:B (2.8) BS03 ZN N/A GO:0006508 ... P0DTD1 N/A
    935880 8zse:B (2.8) BS04 ZN N/A GO:0006508 ... P0DTD1 N/A
    935881 8zse:B (2.8) BS05 A1L2A N/A GO:0006508 ... P0DTD1 N/A
    935882 8zsh:A (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935883 8zsh:B (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935884 8zsh:B (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935885 8zsh:C (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935886 8zsh:C (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935887 8zsh:D (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935888 8zsh:I (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935889 8zsh:I (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935890 8zsh:J (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935891 8zsh:K (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935892 8zsh:L (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935893 8zsh:L (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935894 8zsh:U (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935895 8zsh:U (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935896 8zsh:V (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935897 8zsh:V (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935898 8zsh:W (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935899 8zsh:W (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935900 8zsh:X (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935901 8zsh:X (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935902 8zsh:Y (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935903 8zsh:Y (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935904 8zsh:Z (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935905 8zsh:Z (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935906 8zsh:e (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935907 8zsh:e (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935908 8zsh:f (3.0) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935909 8zsh:f (3.0) BS02 MG N/A GO:0005737 ... K8WC63 N/A
    935910 8zsi:A (3.1) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935911 8zsi:B (3.1) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935912 8zsi:C (3.1) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935913 8zsi:D (3.1) BS01 Y43 N/A GO:0005737 ... K8WC63 N/A
    935914 8zsi:E (3.1) BS01 NAD N/A N/A K8WJ15 N/A
    935915 8zsi:H (3.1) BS01 NAD N/A N/A K8WJ15 N/A
    935916 8zsk:A6 (3.09) BS01 ZMP N/A N/A F1SJP6 41214295
    935917 8zsk:A9 (3.09) BS01 NDP N/A GO:0005759 ... F1SL07 41214295
    935918 8zsk:AK (3.09) BS01 ADP N/A GO:0005759 ... F1SIS9 41214295
    935919 8zsk:B1 (3.09) BS01 PLX N/A GO:0005739 ... A0A8D2CGH8 41214295
    935920 8zsk:B5 (3.09) BS01 PLX N/A N/A F1SGC6 41214295
    935921 8zsk:B9 (3.09) BS01 ZMP N/A N/A K7GSE5 41214295
    935922 8zsk:BL (3.09) BS01 PLX N/A N/A A0A8D1EYI7 41214295
    935923 8zsk:CB (3.09) BS01 PLX N/A GO:0005737 ... A0A480JRW3 41214295
    935924 8zsk:N1 (3.09) BS01 PLX N/A GO:0003954 ... O79874 41214295
    935925 8zsk:N1 (3.09) BS02 U10 N/A GO:0003954 ... O79874 41214295
    935926 8zsk:N2 (3.09) BS01 PLX N/A GO:0005743 ... O79875 41214295
    935927 8zsk:N4 (3.09) BS01 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935928 8zsk:N4 (3.09) BS02 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935929 8zsk:N5 (3.09) BS01 PLX N/A GO:0005743 ... Q71K68 41214295
    935930 8zsk:N6 (3.09) BS01 PLX N/A GO:0005739 ... O79882 41214295
    935931 8zsk:S1 (3.09) BS01 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935932 8zsk:S1 (3.09) BS02 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935933 8zsk:S1 (3.09) BS03 FES N/A GO:0005743 ... A0A4X1V1H9 41214295
    935934 8zsk:S1 (3.09) BS04 MG N/A GO:0005743 ... A0A4X1V1H9 41214295
    935935 8zsk:S2 (3.09) BS01 U10 N/A GO:0003954 ... F1S1A8 41214295
    935936 8zsk:S2 (3.09) BS02 MF8 N/A GO:0003954 ... F1S1A8 41214295
    935937 8zsk:S2 (3.09) BS03 SF4 N/A GO:0003954 ... F1S1A8 41214295
    935938 8zsk:S6 (3.09) BS01 ZN N/A N/A F1S031 41214295
    935939 8zsk:S7 (3.09) BS01 U10 N/A N/A A0A8D1TL60 41214295
    935940 8zsk:S7 (3.09) BS02 SF4 N/A N/A A0A8D1TL60 41214295
    935941 8zsk:S7 (3.09) BS03 PLX N/A N/A A0A8D1TL60 41214295
    935942 8zsk:S8 (3.09) BS01 SF4 N/A N/A A0A287BDC0 41214295
    935943 8zsk:S8 (3.09) BS02 SF4 N/A N/A A0A287BDC0 41214295
    935944 8zsk:V1 (3.09) BS01 SF4 N/A GO:0005743 ... A0A4X1SZP7 41214295
    935945 8zsk:V1 (3.09) BS02 FMN N/A GO:0005743 ... A0A4X1SZP7 41214295
    935946 8zsk:V2 (3.09) BS01 FES N/A N/A A0A287BG40 41214295
    935947 8zsl:A6 (2.88) BS01 ZMP N/A N/A F1SJP6 41214295
    935948 8zsl:A9 (2.88) BS01 NDP N/A GO:0005759 ... F1SL07 41214295
    935949 8zsl:AK (2.88) BS01 ADP N/A GO:0005759 ... F1SIS9 41214295
    935950 8zsl:AL (2.88) BS01 PLX N/A GO:0005743 ... I3LGM4 41214295
    935951 8zsl:AM (2.88) BS01 PLX N/A GO:0005743 ... F1SQP4 41214295
    935952 8zsl:B1 (2.88) BS01 PLX N/A GO:0005739 ... A0A8D2CGH8 41214295
    935953 8zsl:B5 (2.88) BS01 PLX N/A N/A F1SGC6 41214295
    935954 8zsl:B9 (2.88) BS01 ZMP N/A N/A K7GSE5 41214295
    935955 8zsl:BL (2.88) BS01 PLX N/A N/A A0A8D1EYI7 41214295
    935956 8zsl:BL (2.88) BS02 PLX N/A N/A A0A8D1EYI7 41214295
    935957 8zsl:CB (2.88) BS01 PLX N/A GO:0005737 ... A0A480JRW3 41214295
    935958 8zsl:N1 (2.88) BS01 PLX N/A GO:0003954 ... O79874 41214295
    935959 8zsl:N1 (2.88) BS02 U10 N/A GO:0003954 ... O79874 41214295
    935960 8zsl:N4 (2.88) BS01 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935961 8zsl:N4 (2.88) BS02 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935962 8zsl:N4 (2.88) BS03 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935963 8zsl:S1 (2.88) BS01 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935964 8zsl:S1 (2.88) BS02 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935965 8zsl:S1 (2.88) BS03 FES N/A GO:0005743 ... A0A4X1V1H9 41214295
    935966 8zsl:S1 (2.88) BS04 MG N/A GO:0005743 ... A0A4X1V1H9 41214295
    935967 8zsl:S2 (2.88) BS01 U10 N/A GO:0003954 ... F1S1A8 41214295
    935968 8zsl:S2 (2.88) BS02 SF4 N/A GO:0003954 ... F1S1A8 41214295
    935969 8zsl:S5 (2.88) BS01 PLX N/A GO:0005739 ... F1SV23 41214295
    935970 8zsl:S6 (2.88) BS01 ZN N/A N/A F1S031 41214295
    935971 8zsl:S7 (2.88) BS01 U10 N/A N/A A0A8D1TL60 41214295
    935972 8zsl:S7 (2.88) BS02 MF8 N/A N/A A0A8D1TL60 41214295
    935973 8zsl:S7 (2.88) BS03 SF4 N/A N/A A0A8D1TL60 41214295
    935974 8zsl:S7 (2.88) BS04 PLX N/A N/A A0A8D1TL60 41214295
    935975 8zsl:S8 (2.88) BS01 SF4 N/A N/A A0A287BDC0 41214295
    935976 8zsl:S8 (2.88) BS02 SF4 N/A N/A A0A287BDC0 41214295
    935977 8zsl:V1 (2.88) BS01 SF4 N/A GO:0005743 ... A0A4X1SZP7 41214295
    935978 8zsl:V1 (2.88) BS02 FMN N/A GO:0005743 ... A0A4X1SZP7 41214295
    935979 8zsl:V2 (2.88) BS01 FES N/A N/A A0A287BG40 41214295
    935980 8zsm:A6 (3.25) BS01 ZMP N/A N/A F1SJP6 41214295
    935981 8zsm:A9 (3.25) BS01 NDP N/A GO:0005759 ... F1SL07 41214295
    935982 8zsm:AK (3.25) BS01 ADP N/A GO:0005759 ... F1SIS9 41214295
    935983 8zsm:AL (3.25) BS01 PLX N/A GO:0005743 ... I3LGM4 41214295
    935984 8zsm:B5 (3.25) BS01 PLX N/A N/A F1SGC6 41214295
    935985 8zsm:B9 (3.25) BS01 ZMP N/A N/A K7GSE5 41214295
    935986 8zsm:CB (3.25) BS01 PLX N/A GO:0005737 ... A0A480JRW3 41214295
    935987 8zsm:N1 (3.25) BS01 PLX N/A GO:0003954 ... O79874 41214295
    935988 8zsm:N2 (3.25) BS01 PLX N/A GO:0005743 ... O79875 41214295
    935989 8zsm:N4 (3.25) BS01 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935990 8zsm:N4 (3.25) BS02 PLX N/A GO:0008137 ... Q7IIB7 41214295
    935991 8zsm:N6 (3.25) BS01 PLX N/A GO:0005739 ... O79882 41214295
    935992 8zsm:S1 (3.25) BS01 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935993 8zsm:S1 (3.25) BS02 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    935994 8zsm:S1 (3.25) BS03 FES N/A GO:0005743 ... A0A4X1V1H9 41214295
    935995 8zsm:S2 (3.25) BS01 SF4 N/A GO:0003954 ... F1S1A8 41214295
    935996 8zsm:S6 (3.25) BS01 ZN N/A N/A F1S031 41214295
    935997 8zsm:S7 (3.25) BS01 SF4 N/A N/A A0A8D1TL60 41214295
    935998 8zsm:S7 (3.25) BS02 PLX N/A N/A A0A8D1TL60 41214295
    935999 8zsm:S8 (3.25) BS01 SF4 N/A N/A A0A287BDC0 41214295
    936000 8zsm:S8 (3.25) BS02 SF4 N/A N/A A0A287BDC0 41214295

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).