SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    936201 8zsz:B (3.59) BS04 ZN N/A GO:0000139 ... Q9Y6M5 39111308
    936202 8zsz:B (3.59) BS05 ZN N/A GO:0000139 ... Q9Y6M5 39111308
    936203 8zt1:A (2.8) BS01 A1D8Z N/A GO:0000166 ... P51576 N/A
    936204 8zt1:A (2.8) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936205 8zt1:A (2.8) BS03 CA N/A GO:0000166 ... P51576 N/A
    936206 8zt1:A (2.8) BS04 ATP N/A GO:0000166 ... P51576 N/A
    936207 8zt1:B (2.8) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936208 8zt1:B (2.8) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936209 8zt1:B (2.8) BS03 CA N/A GO:0000166 ... P51576 N/A
    936210 8zt1:B (2.8) BS04 MG N/A GO:0000166 ... P51576 N/A
    936211 8zt1:C (2.8) BS01 A1D8Z N/A GO:0000166 ... P51576 N/A
    936212 8zt1:C (2.8) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936213 8zt1:C (2.8) BS03 CA N/A GO:0000166 ... P51576 N/A
    936214 8zt1:C (2.8) BS04 ATP N/A GO:0000166 ... P51576 N/A
    936215 8zt2:A (2.31) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936216 8zt2:A (2.31) BS02 CA N/A GO:0000166 ... P51576 N/A
    936217 8zt2:A (2.31) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936218 8zt2:B (2.31) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936219 8zt2:B (2.31) BS02 CA N/A GO:0000166 ... P51576 N/A
    936220 8zt2:B (2.31) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936221 8zt2:C (2.31) BS01 CA N/A GO:0000166 ... P51576 N/A
    936222 8zt2:C (2.31) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936223 8zt2:C (2.31) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936224 8zt4:B (2.6) BS01 BCT N/A N/A A0ACD6B9E2
    A0ACD6B9E3
    39738057
    936225 8zt5:A (2.35) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936226 8zt5:A (2.35) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936227 8zt5:A (2.35) BS03 CA N/A GO:0000166 ... P51576 N/A
    936228 8zt5:B (2.35) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936229 8zt5:B (2.35) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936230 8zt5:C (2.35) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936231 8zt5:C (2.35) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936232 8zt5:C (2.35) BS03 CA N/A GO:0000166 ... P51576 N/A
    936233 8zt8:A (2.34) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936234 8zt8:A (2.34) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936235 8zt8:A (2.34) BS03 CA N/A GO:0000166 ... P51576 N/A
    936236 8zt8:B (2.34) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936237 8zt8:B (2.34) BS02 MG N/A GO:0000166 ... P51576 N/A
    936238 8zt8:B (2.34) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936239 8zt8:B (2.34) BS04 CA N/A GO:0000166 ... P51576 N/A
    936240 8zt8:C (2.34) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936241 8zt8:C (2.34) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936242 8zt8:C (2.34) BS03 CA N/A GO:0000166 ... P51576 N/A
    936243 8zt9:A (1.8) BS01 A1D87 N/A GO:0008233 ... P0DTD1 39591689
    936244 8zt9:B (1.8) BS01 A1D87 N/A GO:0008233 ... P0DTD1 39591689
    936245 8zta:A (2.58) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936246 8zta:A (2.58) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936247 8zta:A (2.58) BS03 CA N/A GO:0000166 ... P51576 N/A
    936248 8zta:B (2.58) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936249 8zta:B (2.58) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936250 8zta:B (2.58) BS03 CA N/A GO:0000166 ... P51576 N/A
    936251 8zta:C (2.58) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936252 8zta:C (2.58) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936253 8zta:C (2.58) BS03 CA N/A GO:0000166 ... P51576 N/A
    936254 8ztb:A (2.9) BS01 ZN N/A GO:0008270 ... P52699 N/A
    936255 8ztb:A (2.9) BS02 ZN N/A GO:0008270 ... P52699 N/A
    936256 8ztb:B (2.9) BS01 ZN N/A GO:0008270 ... P52699 N/A
    936257 8ztb:B (2.9) BS02 ZN N/A GO:0008270 ... P52699 N/A
    936258 8ztc:A (2.26) BS01 AMP N/A GO:0000196 ... O13352 39622772
    936259 8ztd:A (2.63) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936260 8ztd:A (2.63) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936261 8ztd:A (2.63) BS03 MG N/A GO:0000166 ... P51576 N/A
    936262 8ztd:A (2.63) BS04 CA N/A GO:0000166 ... P51576 N/A
    936263 8ztd:B (2.63) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936264 8ztd:B (2.63) BS02 CA N/A GO:0000166 ... P51576 N/A
    936265 8ztd:B (2.63) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936266 8ztd:C (2.63) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936267 8ztd:C (2.63) BS02 CA N/A GO:0000166 ... P51576 N/A
    936268 8ztd:C (2.63) BS03 ATP N/A GO:0000166 ... P51576 N/A
    936269 8zte:A (3.17) BS01 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936270 8zte:B (3.17) BS01 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936271 8ztf:A (2.43) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936272 8ztf:A (2.43) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936273 8ztf:A (2.43) BS03 MG N/A GO:0000166 ... P51576 N/A
    936274 8ztf:A (2.43) BS04 CA N/A GO:0000166 ... P51576 N/A
    936275 8ztf:B (2.43) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936276 8ztf:B (2.43) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936277 8ztf:B (2.43) BS03 CA N/A GO:0000166 ... P51576 N/A
    936278 8ztf:C (2.43) BS01 ATP N/A GO:0000166 ... P51576 N/A
    936279 8ztf:C (2.43) BS02 ATP N/A GO:0000166 ... P51576 N/A
    936280 8ztf:C (2.43) BS03 CA N/A GO:0000166 ... P51576 N/A
    936281 8ztg:A (2.95) BS01 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936282 8ztg:A (2.95) BS02 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936283 8ztg:A (2.95) BS03 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936284 8ztg:A (2.95) BS04 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936285 8ztg:B (2.95) BS01 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936286 8ztg:B (2.95) BS02 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936287 8ztg:B (2.95) BS03 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936288 8ztg:B (2.95) BS04 Y01 N/A GO:0005253 ... Q9LS46 39979303
    936289 8ztj:A (2.73) BS01 A1L2F N/A GO:0005253 ... Q9LS46 39979303
    936290 8ztj:B (2.73) BS01 A1L2F N/A GO:0005253 ... Q9LS46 39979303
    936291 8zto:A (3.55) BS01 K9G N/A GO:0000822 ... Q9UBH6 40140662
    936292 8zto:A (3.55) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40140662
    936293 8zto:B (3.55) BS01 K9G N/A GO:0000822 ... Q9UBH6 40140662
    936294 8zto:B (3.55) BS02 PO4 N/A GO:0000822 ... Q9UBH6 40140662
    936295 8ztp:A (3.2) BS01 PLP N/A GO:0031071 ... Q8EV24 39615726
    936296 8ztp:B (3.2) BS01 PLP N/A GO:0031071 ... Q8EV24 39615726
    936297 8ztq:A (2.889) BS01 ZN N/A GO:0005506 ... Q8EV25 39615726
    936298 8ztq:B (2.889) BS01 ZN N/A GO:0005506 ... Q8EV25 39615726
    936299 8ztu:0 (2.9) BS01 rna N/A GO:0000027 ... P0A7N9 40057501
    936300 8ztu:1 (2.9) BS01 rna N/A GO:0002181 ... P0A7P5 40057501
    936301 8ztu:2 (2.9) BS01 rna N/A GO:0002181 ... P0A7Q1 40057501
    936302 8ztu:3 (2.9) BS01 rna N/A GO:0002181 ... P0A7Q6 40057501
    936303 8ztu:3 (2.9) BS02 ZN N/A GO:0002181 ... P0A7Q6 40057501
    936304 8ztu:4 (2.9) BS01 rna N/A GO:0002181 ... P0A7M9 40057501
    936305 8ztu:4 (2.9) BS02 ZN N/A GO:0002181 ... P0A7M9 40057501
    936306 8ztu:B (2.9) BS01 rna N/A GO:0000028 ... P0A7V0 40057501
    936307 8ztu:C (2.9) BS01 rna N/A GO:0000028 ... P0A7V3 40057501
    936308 8ztu:D (2.9) BS01 rna N/A GO:0000028 ... P0A7V8 40057501
    936309 8ztu:E (2.9) BS01 rna N/A GO:0000028 ... P0A7W1 40057501
    936310 8ztu:F (2.9) BS01 rna N/A GO:0002181 ... P02358 40057501
    936311 8ztu:G (2.9) BS01 rna N/A GO:0000028 ... P02359 40057501
    936312 8ztu:H (2.9) BS01 rna N/A GO:0000028 ... P0A7W7 40057501
    936313 8ztu:I (2.9) BS01 rna N/A GO:0002181 ... P0A7X3 40057501
    936314 8ztu:J (2.9) BS01 rna N/A GO:0000049 ... P0A7R5 40057501
    936315 8ztu:K (2.9) BS01 rna N/A GO:0002181 ... P0A7R9 40057501
    936316 8ztu:L (2.9) BS01 rna N/A GO:0000049 ... P0A7S3 40057501
    936317 8ztu:M (2.9) BS01 rna N/A GO:0000049 ... P0A7S9 40057501
    936318 8ztu:M (2.9) BS02 rna N/A GO:0000049 ... P0A7S9 40057501
    936319 8ztu:N (2.9) BS01 rna N/A GO:0000028 ... P0AG59 40057501
    936320 8ztu:O (2.9) BS01 rna N/A GO:0000028 ... P0ADZ4 40057501
    936321 8ztu:O (2.9) BS02 rna N/A GO:0000028 ... P0ADZ4 40057501
    936322 8ztu:P (2.9) BS01 rna N/A GO:0000028 ... P0A7T3 40057501
    936323 8ztu:Q (2.9) BS01 rna N/A GO:0000028 ... P0AG63 40057501
    936324 8ztu:R (2.9) BS01 rna N/A GO:0002181 ... P0A7T7 40057501
    936325 8ztu:S (2.9) BS01 rna N/A GO:0002181 ... P0A7U3 40057501
    936326 8ztu:T (2.9) BS01 rna N/A GO:0000028 ... P0A7U7 40057501
    936327 8ztu:U (2.9) BS01 rna N/A GO:0000028 ... P68679 40057501
    936328 8ztu:c (2.9) BS01 rna N/A GO:0000027 ... P60422 40057501
    936329 8ztu:d (2.9) BS01 rna N/A GO:0000027 ... P60438 40057501
    936330 8ztu:e (2.9) BS01 rna N/A GO:0001070 ... P60723 40057501
    936331 8ztu:f (2.9) BS01 rna N/A GO:0000027 ... P62399 40057501
    936332 8ztu:f (2.9) BS02 rna N/A GO:0000027 ... P62399 40057501
    936333 8ztu:f (2.9) BS03 rna N/A GO:0000027 ... P62399 40057501
    936334 8ztu:g (2.9) BS01 rna N/A GO:0000027 ... P0AG55 40057501
    936335 8ztu:h (2.9) BS01 rna N/A GO:0002181 ... P0A7R1 40057501
    936336 8ztu:i (2.9) BS01 rna N/A GO:0002181 ... P0AA10 40057501
    936337 8ztu:j (2.9) BS01 rna N/A GO:0002181 ... P0ADY3 40057501
    936338 8ztu:j (2.9) BS02 rna N/A GO:0002181 ... P0ADY3 40057501
    936339 8ztu:k (2.9) BS01 rna N/A GO:0002181 ... P02413 40057501
    936340 8ztu:l (2.9) BS01 rna N/A GO:0000027 ... P0ADY7 40057501
    936341 8ztu:l (2.9) BS02 rna N/A GO:0000027 ... P0ADY7 40057501
    936342 8ztu:m (2.9) BS01 rna N/A GO:0000027 ... P0AG44 40057501
    936343 8ztu:n (2.9) BS01 rna N/A GO:0002181 ... P0C018 40057501
    936344 8ztu:n (2.9) BS02 rna N/A GO:0002181 ... P0C018 40057501
    936345 8ztu:o (2.9) BS01 rna N/A GO:0000027 ... P0A7K6 40057501
    936346 8ztu:o (2.9) BS02 rna N/A GO:0000027 ... P0A7K6 40057501
    936347 8ztu:p (2.9) BS01 rna N/A GO:0000027 ... P0A7L3 40057501
    936348 8ztu:q (2.9) BS01 rna N/A GO:0002181 ... P0AG48 40057501
    936349 8ztu:r (2.9) BS01 rna N/A GO:0002181 ... P61175 40057501
    936350 8ztu:s (2.9) BS01 rna N/A GO:0000027 ... P0ADZ0 40057501
    936351 8ztu:t (2.9) BS01 rna N/A GO:0000027 ... P60624 40057501
    936352 8ztu:u (2.9) BS01 rna N/A GO:0000027 ... P68919 40057501
    936353 8ztu:v (2.9) BS01 rna N/A GO:0000027 ... P0A7L8 40057501
    936354 8ztu:v (2.9) BS02 rna N/A GO:0000027 ... P0A7L8 40057501
    936355 8ztu:w (2.9) BS01 rna N/A GO:0000027 ... P0A7M2 40057501
    936356 8ztu:x (2.9) BS01 rna N/A GO:0000027 ... P0A7M6 40057501
    936357 8ztu:y (2.9) BS01 rna N/A GO:0000027 ... P0AG51 40057501
    936358 8ztu:z (2.9) BS01 rna N/A GO:0000027 ... P0A7N4 40057501
    936359 8ztv:0 (2.9) BS01 rna N/A GO:0000027 ... P0A7N9 40057501
    936360 8ztv:1 (2.9) BS01 rna N/A GO:0002181 ... P0A7P5 40057501
    936361 8ztv:2 (2.9) BS01 rna N/A GO:0002181 ... P0A7Q1 40057501
    936362 8ztv:3 (2.9) BS01 rna N/A GO:0002181 ... P0A7Q6 40057501
    936363 8ztv:3 (2.9) BS02 ZN N/A GO:0002181 ... P0A7Q6 40057501
    936364 8ztv:4 (2.9) BS01 rna N/A GO:0002181 ... P0A7M9 40057501
    936365 8ztv:4 (2.9) BS02 ZN N/A GO:0002181 ... P0A7M9 40057501
    936366 8ztv:B (2.9) BS01 rna N/A GO:0000028 ... P0A7V0 40057501
    936367 8ztv:C (2.9) BS01 rna N/A GO:0000028 ... P0A7V3 40057501
    936368 8ztv:D (2.9) BS01 rna N/A GO:0000028 ... P0A7V8 40057501
    936369 8ztv:E (2.9) BS01 rna N/A GO:0000028 ... P0A7W1 40057501
    936370 8ztv:F (2.9) BS01 rna N/A GO:0002181 ... P02358 40057501
    936371 8ztv:G (2.9) BS01 rna N/A GO:0000028 ... P02359 40057501
    936372 8ztv:H (2.9) BS01 rna N/A GO:0000028 ... P0A7W7 40057501
    936373 8ztv:I (2.9) BS01 rna N/A GO:0002181 ... P0A7X3 40057501
    936374 8ztv:J (2.9) BS01 rna N/A GO:0000049 ... P0A7R5 40057501
    936375 8ztv:J (2.9) BS02 MG N/A GO:0000049 ... P0A7R5 40057501
    936376 8ztv:K (2.9) BS01 rna N/A GO:0002181 ... P0A7R9 40057501
    936377 8ztv:L (2.9) BS01 rna N/A GO:0000049 ... P0A7S3 40057501
    936378 8ztv:M (2.9) BS01 rna N/A GO:0000049 ... P0A7S9 40057501
    936379 8ztv:M (2.9) BS02 rna N/A GO:0000049 ... P0A7S9 40057501
    936380 8ztv:N (2.9) BS01 rna N/A GO:0000028 ... P0AG59 40057501
    936381 8ztv:O (2.9) BS01 rna N/A GO:0000028 ... P0ADZ4 40057501
    936382 8ztv:O (2.9) BS02 rna N/A GO:0000028 ... P0ADZ4 40057501
    936383 8ztv:P (2.9) BS01 rna N/A GO:0000028 ... P0A7T3 40057501
    936384 8ztv:Q (2.9) BS01 rna N/A GO:0000028 ... P0AG63 40057501
    936385 8ztv:R (2.9) BS01 rna N/A GO:0002181 ... P0A7T7 40057501
    936386 8ztv:S (2.9) BS01 rna N/A GO:0002181 ... P0A7U3 40057501
    936387 8ztv:T (2.9) BS01 rna N/A GO:0000028 ... P0A7U7 40057501
    936388 8ztv:U (2.9) BS01 rna N/A GO:0000028 ... P68679 40057501
    936389 8ztv:V (2.9) BS01 rna N/A GO:0003747 ... P07012 40057501
    936390 8ztv:V (2.9) BS02 rna N/A GO:0003747 ... P07012 40057501
    936391 8ztv:V (2.9) BS03 rna N/A GO:0003747 ... P07012 40057501
    936392 8ztv:V (2.9) BS04 rna N/A GO:0003747 ... P07012 40057501
    936393 8ztv:c (2.9) BS01 rna N/A GO:0000027 ... P60422 40057501
    936394 8ztv:d (2.9) BS01 rna N/A GO:0000027 ... P60438 40057501
    936395 8ztv:e (2.9) BS01 rna N/A GO:0001070 ... P60723 40057501
    936396 8ztv:f (2.9) BS01 rna N/A GO:0000027 ... P62399 40057501
    936397 8ztv:f (2.9) BS02 rna N/A GO:0000027 ... P62399 40057501
    936398 8ztv:f (2.9) BS03 rna N/A GO:0000027 ... P62399 40057501
    936399 8ztv:g (2.9) BS01 rna N/A GO:0000027 ... P0AG55 40057501
    936400 8ztv:h (2.9) BS01 rna N/A GO:0002181 ... P0A7R1 40057501

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).