SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    936601 9g0p:e (3.0) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936602 9g0p:f (3.0) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936603 9g0q:A (3.2) BS01 GDP N/A N/A P30883 39798564
    936604 9g0q:A (3.2) BS02 GTP N/A N/A P30883 39798564
    936605 9g0q:B (3.2) BS01 GDP N/A N/A P30883 39798564
    936606 9g0q:B (3.2) BS02 GTP N/A N/A P30883 39798564
    936607 9g0q:C (3.2) BS01 GDP N/A N/A P30883 39798564
    936608 9g0q:C (3.2) BS02 GTP N/A N/A P30883 39798564
    936609 9g0q:D (3.2) BS01 GDP N/A N/A P30883 39798564
    936610 9g0q:D (3.2) BS02 GTP N/A N/A P30883 39798564
    936611 9g0q:E (3.2) BS01 GDP N/A N/A P30883 39798564
    936612 9g0q:E (3.2) BS02 GTP N/A N/A P30883 39798564
    936613 9g0q:F (3.2) BS01 GDP N/A N/A P30883 39798564
    936614 9g0q:F (3.2) BS02 GTP N/A N/A P30883 39798564
    936615 9g0q:a (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936616 9g0q:b (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936617 9g0q:c (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936618 9g0q:d (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936619 9g0q:e (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936620 9g0q:f (3.2) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936621 9g0r:A (3.1) BS01 GDP N/A N/A P30883 39798564
    936622 9g0r:B (3.1) BS01 GDP N/A N/A P30883 39798564
    936623 9g0r:C (3.1) BS01 GDP N/A N/A P30883 39798564
    936624 9g0r:D (3.1) BS01 GDP N/A N/A P30883 39798564
    936625 9g0r:E (3.1) BS01 GDP N/A N/A P30883 39798564
    936626 9g0r:F (3.1) BS01 GDP N/A N/A P30883 39798564
    936627 9g0r:a (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936628 9g0r:b (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936629 9g0r:c (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936630 9g0r:d (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936631 9g0r:e (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936632 9g0r:f (3.1) BS01 GTP N/A N/A A0A8J0UQF0 39798564
    936633 9g0s:A (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936634 9g0s:B (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936635 9g0s:C (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936636 9g0s:D (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936637 9g0s:E (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936638 9g0s:F (3.6) BS01 GDP N/A N/A Q0IIR4 39798564
    936639 9g0s:a (3.6) BS01 MG N/A N/A Q5EB23 39798564
    936640 9g0s:a (3.6) BS02 GTP N/A N/A Q5EB23 39798564
    936641 9g0s:b (3.6) BS01 MG N/A N/A Q5EB23 39798564
    936642 9g0s:b (3.6) BS02 GTP N/A N/A Q5EB23 39798564
    936643 9g0s:c (3.6) BS01 MG N/A N/A Q5EB23 39798564
    936644 9g0s:c (3.6) BS02 GTP N/A N/A Q5EB23 39798564
    936645 9g0s:d (3.6) BS01 GTP N/A N/A Q5EB23 39798564
    936646 9g0s:d (3.6) BS02 MG N/A N/A Q5EB23 39798564
    936647 9g0s:e (3.6) BS01 GTP N/A N/A Q5EB23 39798564
    936648 9g0s:e (3.6) BS02 MG N/A N/A Q5EB23 39798564
    936649 9g0s:f (3.6) BS01 GTP N/A N/A Q5EB23 39798564
    936650 9g0s:f (3.6) BS02 MG N/A N/A Q5EB23 39798564
    936651 9g0t:A (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936652 9g0t:B (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936653 9g0t:C (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936654 9g0t:D (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936655 9g0t:E (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936656 9g0t:F (3.5) BS01 GDP N/A N/A Q0IIR4 39798564
    936657 9g0t:a (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936658 9g0t:a (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936659 9g0t:b (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936660 9g0t:b (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936661 9g0t:c (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936662 9g0t:c (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936663 9g0t:d (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936664 9g0t:d (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936665 9g0t:e (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936666 9g0t:e (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936667 9g0t:f (3.5) BS01 GTP N/A N/A Q5EB23 39798564
    936668 9g0t:f (3.5) BS02 MG N/A N/A Q5EB23 39798564
    936669 9g11:A (3.2) BS01 BGC N/A GO:0015144 ... Q9SFG0 N/A
    936670 9g11:A (3.2) BS02 Y01 N/A GO:0015144 ... Q9SFG0 N/A
    936671 9g11:A (3.2) BS03 Y01 N/A GO:0015144 ... Q9SFG0 N/A
    936672 9g11:A (3.2) BS04 Y01 N/A GO:0015144 ... Q9SFG0 N/A
    936673 9g13:A (1.8) BS01 peptide N/A N/A N/A N/A
    936674 9g13:A (1.8) BS02 peptide N/A N/A N/A N/A
    936675 9g13:C (1.8) BS01 peptide N/A N/A N/A N/A
    936676 9g13:C (1.8) BS02 peptide N/A N/A N/A N/A
    936677 9g13:E (1.8) BS01 peptide N/A N/A N/A N/A
    936678 9g13:E (1.8) BS02 peptide N/A N/A N/A N/A
    936679 9g13:G (1.8) BS01 peptide N/A N/A N/A N/A
    936680 9g13:G (1.8) BS02 peptide N/A N/A N/A N/A
    936681 9g2k:A (3.14) BS01 AOV N/A GO:0005524 ... G7CBF5 39880813
    936682 9g2k:A (3.14) BS02 MG N/A GO:0005524 ... G7CBF5 39880813
    936683 9g2k:A (3.14) BS03 ZN N/A GO:0005524 ... G7CBF5 39880813
    936684 9g2k:A (3.14) BS04 AOV N/A GO:0005524 ... G7CBF5 39880813
    936685 9g2k:B (3.14) BS01 AOV N/A GO:0005524 ... G7CBF6 39880813
    936686 9g2k:B (3.14) BS02 AOV N/A GO:0005524 ... G7CBF6 39880813
    936687 9g2k:B (3.14) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936688 9g2l:A (3.23) BS01 ZN N/A GO:0005524 ... G7CBF5 39880813
    936689 9g2m:A (3.23) BS01 AOV N/A GO:0005524 ... G7CBF5 39880813
    936690 9g2m:A (3.23) BS02 MG N/A GO:0005524 ... G7CBF5 39880813
    936691 9g2m:A (3.23) BS03 ZN N/A GO:0005524 ... G7CBF5 39880813
    936692 9g2m:A (3.23) BS04 AOV N/A GO:0005524 ... G7CBF5 39880813
    936693 9g2m:B (3.23) BS01 AOV N/A GO:0005524 ... G7CBF6 39880813
    936694 9g2m:B (3.23) BS02 AOV N/A GO:0005524 ... G7CBF6 39880813
    936695 9g2m:B (3.23) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936696 9g2p:A (2.5) BS01 ATP N/A N/A G7CBF5 39880813
    936697 9g2p:A (2.5) BS02 MG N/A N/A G7CBF5 39880813
    936698 9g2p:A (2.5) BS03 ZN N/A N/A G7CBF5 39880813
    936699 9g2p:A (2.5) BS04 ATP N/A N/A G7CBF5 39880813
    936700 9g2p:B (2.5) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936701 9g2p:B (2.5) BS02 MG N/A GO:0005524 ... G7CBF6 39880813
    936702 9g2p:B (2.5) BS03 ATP N/A GO:0005524 ... G7CBF6 39880813
    936703 9g2s:A (2.9) BS01 ATP N/A N/A G7CBF5 39880813
    936704 9g2s:A (2.9) BS02 MG N/A N/A G7CBF5 39880813
    936705 9g2s:A (2.9) BS03 ATP N/A N/A G7CBF5 39880813
    936706 9g2s:B (2.9) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936707 9g2s:B (2.9) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    936708 9g2s:B (2.9) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936709 9g2t:A (3.15) BS01 ATP N/A N/A G7CBF5 39880813
    936710 9g2t:A (3.15) BS02 MG N/A N/A G7CBF5 39880813
    936711 9g2t:A (3.15) BS03 ATP N/A N/A G7CBF5 39880813
    936712 9g2t:B (3.15) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936713 9g2t:B (3.15) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    936714 9g2t:B (3.15) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936715 9g2v:A (3.35) BS01 ADP N/A N/A G7CBF5 39880813
    936716 9g2v:A (3.35) BS02 ZN N/A N/A G7CBF5 39880813
    936717 9g2v:B (3.35) BS01 ADP N/A GO:0005524 ... G7CBF6 39880813
    936718 9g2x:A (2.85) BS01 ATP N/A N/A G7CBF5 39880813
    936719 9g2x:A (2.85) BS02 MG N/A N/A G7CBF5 39880813
    936720 9g2x:A (2.85) BS03 ZN N/A N/A G7CBF5 39880813
    936721 9g2x:A (2.85) BS04 ATP N/A N/A G7CBF5 39880813
    936722 9g2x:B (2.85) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936723 9g2x:B (2.85) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    936724 9g2x:B (2.85) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936725 9g2y:A (3.6) BS01 ADP N/A N/A G7CBF5 39880813
    936726 9g2y:B (3.6) BS01 ADP N/A GO:0005524 ... G7CBF6 39880813
    936727 9g2z:A (2.78) BS01 ATP N/A N/A G7CBF5 39880813
    936728 9g2z:A (2.78) BS02 MG N/A N/A G7CBF5 39880813
    936729 9g2z:A (2.78) BS03 ZN N/A N/A G7CBF5 39880813
    936730 9g2z:A (2.78) BS04 ATP N/A N/A G7CBF5 39880813
    936731 9g2z:B (2.78) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936732 9g2z:B (2.78) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    936733 9g2z:B (2.78) BS03 MG N/A GO:0005524 ... G7CBF6 39880813
    936734 9g34:A (1.3) BS01 017 N/A GO:0004190 ... P11838 N/A
    936735 9g34:B (1.3) BS01 017 N/A GO:0004190 ... P11838 N/A
    936736 9g35:A (1.5) BS01 AB1 N/A GO:0004190 ... P11838 N/A
    936737 9g36:A (3.21) BS01 ADP N/A N/A G7CBF5 39880813
    936738 9g36:B (3.21) BS01 ADP N/A GO:0005524 ... G7CBF6 39880813
    936739 9g37:A (3.0) BS01 ATP N/A N/A G7CBF5 39880813
    936740 9g37:A (3.0) BS02 MG N/A N/A G7CBF5 39880813
    936741 9g37:A (3.0) BS03 ATP N/A N/A G7CBF5 39880813
    936742 9g37:B (3.0) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    936743 9g37:B (3.0) BS02 MG N/A GO:0005524 ... G7CBF6 39880813
    936744 9g37:B (3.0) BS03 ATP N/A GO:0005524 ... G7CBF6 39880813
    936745 9g38:A (1.2) BS01 A1IH2 N/A N/A P00918 39711099
    936746 9g38:A (1.2) BS02 ZN N/A N/A P00918 39711099
    936747 9g3r:A (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    936748 9g3r:A (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    936749 9g3r:B (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    936750 9g3r:B (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    936751 9g3r:C (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    936752 9g3r:C (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    936753 9g3r:D (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    936754 9g3r:D (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    936755 9g3r:E (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    936756 9g3r:E (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    936757 9g3r:F (1.7) BS01 CA N/A GO:0005737 ... Q05097 39535852
    936758 9g3r:F (1.7) BS02 YIO N/A GO:0005737 ... Q05097 39535852
    936759 9g3r:G (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    936760 9g3r:G (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    936761 9g3r:H (1.7) BS01 YIO N/A GO:0005737 ... Q05097 39535852
    936762 9g3r:H (1.7) BS02 CA N/A GO:0005737 ... Q05097 39535852
    936763 9g3s:A (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936764 9g3s:A (1.85) BS02 CA N/A GO:0030246 ... Q9HYN5 39535852
    936765 9g3s:A (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936766 9g3s:B (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936767 9g3s:B (1.85) BS02 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936768 9g3s:B (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936769 9g3s:B (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936770 9g3s:C (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936771 9g3s:C (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936772 9g3s:C (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936773 9g3s:C (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936774 9g3s:D (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936775 9g3s:D (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936776 9g3s:D (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936777 9g3s:D (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936778 9g3s:E (1.85) BS01 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936779 9g3s:E (1.85) BS02 CA N/A GO:0030246 ... Q9HYN5 39535852
    936780 9g3s:E (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936781 9g3s:F (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936782 9g3s:F (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936783 9g3s:F (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936784 9g3s:F (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936785 9g3s:G (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936786 9g3s:G (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936787 9g3s:G (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936788 9g3s:G (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936789 9g3s:H (1.85) BS01 YIO N/A GO:0030246 ... Q9HYN5 39535852
    936790 9g3s:H (1.85) BS02 FUC N/A GO:0030246 ... Q9HYN5 39535852
    936791 9g3s:H (1.85) BS03 CA N/A GO:0030246 ... Q9HYN5 39535852
    936792 9g3s:H (1.85) BS04 CA N/A GO:0030246 ... Q9HYN5 39535852
    936793 9g4s:A (1.95) BS01 A1III N/A N/A Q86U44 N/A
    936794 9g4s:A (1.95) BS02 CA N/A N/A Q86U44 N/A
    936795 9g4s:A (1.95) BS03 CA N/A N/A Q86U44 N/A
    936796 9g4s:B (1.95) BS01 CA N/A N/A Q9HCE5 N/A
    936797 9g4u:A (2.0) BS01 A1IIK N/A N/A Q86U44 N/A
    936798 9g4w:A (1.85) BS01 A1IIM N/A N/A Q86U44 N/A
    936799 9g4w:B (1.85) BS01 CA N/A N/A Q9HCE5 N/A
    936800 9g66:A (1.79) BS01 ASN N/A N/A Q2K0Z2 39754186

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).