SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    936801 8zx4:R (2.85) BS01 A1D9E N/A GO:0004930 ... Q9Y2T6 39482404
    936802 8zx5:B (3.03) BS01 peptide N/A GO:0001750 ... P62873 39482404
    936803 8zx5:R (3.03) BS01 A1D9D N/A GO:0004930 ... Q9Y2T6 39482404
    936804 8zx8:A (2.4) BS01 GLA N/A GO:0000139 ... Q9Y2C3 40130308
    936805 8zx8:A (2.4) BS02 MN N/A GO:0000139 ... Q9Y2C3 40130308
    936806 8zx8:A (2.4) BS03 UDP N/A GO:0000139 ... Q9Y2C3 40130308
    936807 8zx8:A (2.4) BS04 GAL N/A GO:0000139 ... Q9Y2C3 40130308
    936808 8zx8:B (2.4) BS01 GLA N/A GO:0000139 ... Q9Y2C3 40130308
    936809 8zx8:B (2.4) BS02 MN N/A GO:0000139 ... Q9Y2C3 40130308
    936810 8zx8:B (2.4) BS03 UDP N/A GO:0000139 ... Q9Y2C3 40130308
    936811 8zx9:A (2.3) BS01 MN N/A GO:0000139 ... Q9Y2C3 40130308
    936812 8zx9:A (2.3) BS02 UDP N/A GO:0000139 ... Q9Y2C3 40130308
    936813 8zx9:A (2.3) BS03 GAL N/A GO:0000139 ... Q9Y2C3 40130308
    936814 8zx9:B (2.3) BS01 MN N/A GO:0000139 ... Q9Y2C3 40130308
    936815 8zx9:B (2.3) BS02 UDP N/A GO:0000139 ... Q9Y2C3 40130308
    936816 8zx9:B (2.3) BS03 GAL N/A GO:0000139 ... Q9Y2C3 40130308
    936817 8zxb:A (1.75) BS01 PLP N/A GO:0003824 ... A0AAV2WF13 N/A
    936818 8zxb:B (1.75) BS01 PLP N/A GO:0003824 ... A0AAV2WF13 N/A
    936819 8zxb:C (1.75) BS01 PLP N/A GO:0003824 ... A0AAV2WF13 N/A
    936820 8zxb:D (1.75) BS01 PLP N/A GO:0003824 ... A0AAV2WF13 N/A
    936821 8zxc:A (-1.00) BS01 peptide N/A N/A Q9NR48 N/A
    936822 8zxc:A (-1.00) BS02 ZN N/A N/A Q9NR48 N/A
    936823 8zxc:A (-1.00) BS03 ZN N/A N/A Q9NR48 N/A
    936824 8zxd:A (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936825 8zxd:B (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936826 8zxd:C (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936827 8zxd:D (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936828 8zxd:E (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936829 8zxd:F (2.9) BS01 Y01 N/A GO:0005515 ... Q8TAA9 39753546
    936830 8zxe:A (2.7) BS01 rna N/A N/A B3Y653 N/A
    936831 8zxe:A (2.7) BS02 rna N/A N/A B3Y653 N/A
    936832 8zxe:B (2.7) BS01 rna N/A N/A B3Y653 N/A
    936833 8zxe:B (2.7) BS02 rna N/A N/A B3Y653 N/A
    936834 8zxf:A (2.7) BS01 rna N/A N/A B3Y653 N/A
    936835 8zxf:A (2.7) BS02 rna N/A N/A B3Y653 N/A
    936836 8zxf:B (2.7) BS01 rna N/A N/A B3Y653 N/A
    936837 8zxf:B (2.7) BS02 rna N/A N/A B3Y653 N/A
    936838 8zxg:A (1.494) BS01 MG N/A GO:0008800 ... N/A 41435961
    936839 8zxg:A (1.494) BS02 MG N/A GO:0008800 ... N/A 41435961
    936840 8zxg:A (1.494) BS03 MG N/A GO:0008800 ... N/A 41435961
    936841 8zxg:A (1.494) BS04 MG N/A GO:0008800 ... N/A 41435961
    936842 8zxg:A (1.494) BS05 MG N/A GO:0008800 ... N/A 41435961
    936843 8zxg:A (1.494) BS06 MG N/A GO:0008800 ... N/A 41435961
    936844 8zxg:A (1.494) BS07 MG N/A GO:0008800 ... N/A 41435961
    936845 8zxg:A (1.494) BS08 MG N/A GO:0008800 ... N/A 41435961
    936846 8zxg:A (1.494) BS09 MG N/A GO:0008800 ... N/A 41435961
    936847 8zxg:A (1.494) BS10 MG N/A GO:0008800 ... N/A 41435961
    936848 8zxg:A (1.494) BS11 MG N/A GO:0008800 ... N/A 41435961
    936849 8zxg:A (1.494) BS12 MG N/A GO:0008800 ... N/A 41435961
    936850 8zxg:A (1.494) BS13 MG N/A GO:0008800 ... N/A 41435961
    936851 8zxg:A (1.494) BS14 MG N/A GO:0008800 ... N/A 41435961
    936852 8zxg:A (1.494) BS15 MG N/A GO:0008800 ... N/A 41435961
    936853 8zxg:A (1.494) BS16 MG N/A GO:0008800 ... N/A 41435961
    936854 8zxg:A (1.494) BS17 MG N/A GO:0008800 ... N/A 41435961
    936855 8zxg:A (1.494) BS18 MG N/A GO:0008800 ... N/A 41435961
    936856 8zxg:A (1.494) BS19 MG N/A GO:0008800 ... N/A 41435961
    936857 8zxg:A (1.494) BS20 MG N/A GO:0008800 ... N/A 41435961
    936858 8zxg:A (1.494) BS21 MG N/A GO:0008800 ... N/A 41435961
    936859 8zxg:A (1.494) BS22 MG N/A GO:0008800 ... N/A 41435961
    936860 8zxg:A (1.494) BS23 MG N/A GO:0008800 ... N/A 41435961
    936861 8zxg:A (1.494) BS24 MG N/A GO:0008800 ... N/A 41435961
    936862 8zxg:A (1.494) BS25 MG N/A GO:0008800 ... N/A 41435961
    936863 8zxg:A (1.494) BS26 MG N/A GO:0008800 ... N/A 41435961
    936864 8zxg:A (1.494) BS27 MG N/A GO:0008800 ... N/A 41435961
    936865 8zxg:A (1.494) BS28 MG N/A GO:0008800 ... N/A 41435961
    936866 8zxg:A (1.494) BS29 MG N/A GO:0008800 ... N/A 41435961
    936867 8zxg:A (1.494) BS30 MG N/A GO:0008800 ... N/A 41435961
    936868 8zxg:A (1.494) BS31 MG N/A GO:0008800 ... N/A 41435961
    936869 8zxg:A (1.494) BS32 MG N/A GO:0008800 ... N/A 41435961
    936870 8zxg:A (1.494) BS33 ZN N/A GO:0008800 ... N/A 41435961
    936871 8zxg:A (1.494) BS34 ZN N/A GO:0008800 ... N/A 41435961
    936872 8zxi:A (3.12) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    936873 8zxi:B (3.12) BS01 peptide N/A GO:0009279 ... L0RVU0 N/A
    936874 8zxi:D (3.12) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    936875 8zxm:A (3.39) BS01 URC N/A GO:0005351 ... Q9NRM0 40186864
    936876 8zxq:A (1.51) BS01 HEM N/A N/A P73129 39670557
    936877 8zxr:A (1.6) BS01 peptide N/A N/A P73129 39670557
    936878 8zxr:A (1.6) BS02 HEC N/A N/A P73129 39670557
    936879 8zxu:D (1.55) BS01 A1L2G N/A GO:0008379 ... Q5HF61 N/A
    936880 8zxw:A (1.33) BS01 peptide N/A N/A N/A 39542251
    936881 8zxw:B (1.33) BS01 peptide N/A N/A N/A 39542251
    936882 8zxw:H (1.33) BS01 peptide N/A N/A N/A 39542251
    936883 8zxw:L (1.33) BS01 peptide N/A N/A N/A 39542251
    936884 8zxx:A (1.23) BS01 NDP N/A GO:0008299 ... O96693 39811140
    936885 8zxx:A (1.23) BS02 MN N/A GO:0008299 ... O96693 39811140
    936886 8zxx:A (1.23) BS03 A1L2H N/A GO:0008299 ... O96693 39811140
    936887 8zxz:A6 (3.14) BS01 ZMP N/A N/A F1SJP6 41214295
    936888 8zxz:A9 (3.14) BS01 NDP N/A GO:0005759 ... F1SL07 41214295
    936889 8zxz:A9 (3.14) BS02 6F6 N/A GO:0005759 ... F1SL07 41214295
    936890 8zxz:AK (3.14) BS01 ADP N/A GO:0005759 ... F1SIS9 41214295
    936891 8zxz:AL (3.14) BS01 PLX N/A GO:0005743 ... I3LGM4 41214295
    936892 8zxz:AM (3.14) BS01 PLX N/A GO:0005743 ... F1SQP4 41214295
    936893 8zxz:B5 (3.14) BS01 PLX N/A N/A F1SGC6 41214295
    936894 8zxz:B9 (3.14) BS01 ZMP N/A N/A K7GSE5 41214295
    936895 8zxz:BL (3.14) BS01 PLX N/A N/A A0A8D1EYI7 41214295
    936896 8zxz:CB (3.14) BS01 PLX N/A GO:0005737 ... A0A480JRW3 41214295
    936897 8zxz:N1 (3.14) BS01 PLX N/A GO:0003954 ... O79874 41214295
    936898 8zxz:N1 (3.14) BS02 XEW N/A GO:0003954 ... O79874 41214295
    936899 8zxz:N1 (3.14) BS03 6F6 N/A GO:0003954 ... O79874 41214295
    936900 8zxz:N2 (3.14) BS01 PLX N/A GO:0005743 ... O79875 41214295
    936901 8zxz:N3 (3.14) BS01 6F6 N/A GO:0005743 ... O79880 41214295
    936902 8zxz:N3 (3.14) BS02 6F6 N/A GO:0005743 ... O79880 41214295
    936903 8zxz:N4 (3.14) BS01 PLX N/A GO:0008137 ... Q7IIB7 41214295
    936904 8zxz:N4 (3.14) BS02 PLX N/A GO:0008137 ... Q7IIB7 41214295
    936905 8zxz:N6 (3.14) BS01 PLX N/A GO:0005739 ... O79882 41214295
    936906 8zxz:N6 (3.14) BS02 6F6 N/A GO:0005739 ... O79882 41214295
    936907 8zxz:S1 (3.14) BS01 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    936908 8zxz:S1 (3.14) BS02 SF4 N/A GO:0005743 ... A0A4X1V1H9 41214295
    936909 8zxz:S1 (3.14) BS03 FES N/A GO:0005743 ... A0A4X1V1H9 41214295
    936910 8zxz:S1 (3.14) BS04 MG N/A GO:0005743 ... A0A4X1V1H9 41214295
    936911 8zxz:S2 (3.14) BS01 XEW N/A GO:0003954 ... F1S1A8 41214295
    936912 8zxz:S2 (3.14) BS02 SF4 N/A GO:0003954 ... F1S1A8 41214295
    936913 8zxz:S5 (3.14) BS01 PLX N/A GO:0005739 ... F1SV23 41214295
    936914 8zxz:S6 (3.14) BS01 ZN N/A N/A F1S031 41214295
    936915 8zxz:S7 (3.14) BS01 XEW N/A N/A A0A8D1TL60 41214295
    936916 8zxz:S7 (3.14) BS02 SF4 N/A N/A A0A8D1TL60 41214295
    936917 8zxz:S7 (3.14) BS03 PLX N/A N/A A0A8D1TL60 41214295
    936918 8zxz:S8 (3.14) BS01 SF4 N/A N/A A0A287BDC0 41214295
    936919 8zxz:S8 (3.14) BS02 SF4 N/A N/A A0A287BDC0 41214295
    936920 8zxz:V1 (3.14) BS01 SF4 N/A GO:0005743 ... A0A4X1SZP7 41214295
    936921 8zxz:V1 (3.14) BS02 FMN N/A GO:0005743 ... A0A4X1SZP7 41214295
    936922 8zxz:V2 (3.14) BS01 FES N/A N/A A0A287BG40 41214295
    936923 8zy0:A (3.0) BS01 BLA N/A GO:0016020 ... A0A3Q8AKM0 40085715
    936924 8zy0:B (3.0) BS01 BLA N/A GO:0016020 ... A0A3Q8AKM0 40085715
    936925 8zy0:C (3.0) BS01 BLA N/A GO:0016020 ... A0A3Q8AKM0 40085715
    936926 8zy1:A (3.1) BS01 EIC N/A GO:0016020 ... A0ACD6B8H8 40085715
    936927 8zy1:B (3.1) BS01 EIC N/A GO:0016020 ... A0ACD6B8H8 40085715
    936928 8zy1:C (3.1) BS01 EIC N/A GO:0016020 ... A0ACD6B8H8 40085715
    936929 8zy2:A (2.9) BS01 BLA N/A GO:0016020 ... P0DTC2 40085715
    936930 8zy2:A (2.9) BS02 EIC N/A GO:0016020 ... P0DTC2 40085715
    936931 8zy2:B (2.9) BS01 EIC N/A GO:0016020 ... P0DTC2 40085715
    936932 8zy2:B (2.9) BS02 BLA N/A GO:0016020 ... P0DTC2 40085715
    936933 8zy2:B (2.9) BS03 EIC N/A GO:0016020 ... P0DTC2 40085715
    936934 8zy2:C (2.9) BS01 EIC N/A GO:0016020 ... P0DTC2 40085715
    936935 8zy2:C (2.9) BS02 BLA N/A GO:0016020 ... P0DTC2 40085715
    936936 8zy4:A (2.53) BS01 BLR N/A GO:0016020 ... A0A0U1WJY8 40085715
    936937 8zy4:B (2.53) BS01 BLR N/A GO:0016020 ... A0A0U1WJY8 40085715
    936938 8zy4:C (2.53) BS01 BLR N/A GO:0016020 ... A0A0U1WJY8 40085715
    936939 8zyb:A (2.58) BS01 FE N/A N/A N/A N/A
    936940 8zyb:B (2.58) BS01 FE N/A N/A N/A N/A
    936941 8zyb:C (2.58) BS01 FE N/A N/A N/A N/A
    936942 8zyb:D (2.58) BS01 FE N/A N/A N/A N/A
    936943 8zyb:E (2.58) BS01 FE N/A N/A N/A N/A
    936944 8zyb:F (2.58) BS01 FE N/A N/A N/A N/A
    936945 8zyb:G (2.58) BS01 FE N/A N/A N/A N/A
    936946 8zyb:H (2.58) BS01 FE N/A N/A N/A N/A
    936947 8zyc:B (2.99) BS01 rna N/A N/A Q0T963 39228374
    936948 8zyd:B (3.04) BS01 rna N/A N/A Q0T963 39228374
    936949 8zyg:A (1.08) BS01 CU N/A N/A Q9X1H0 39167879
    936950 8zyg:B (1.08) BS01 CU N/A N/A Q9X1H0 39167879
    936951 8zyh:A (1.07) BS01 CU N/A N/A Q9X1H0 39167879
    936952 8zyh:B (1.07) BS01 CU N/A N/A Q9X1H0 39167879
    936953 8zyi:A (1.657) BS01 GLC N/A GO:0003824 ... O66934 40419759
    936954 8zyi:A (1.657) BS02 GLC N/A GO:0003824 ... O66934 40419759
    936955 8zyi:A (1.657) BS03 GLC N/A GO:0003824 ... O66934 40419759
    936956 8zyi:A (1.657) BS04 GLC N/A GO:0003824 ... O66934 40419759
    936957 8zyi:A (1.657) BS05 GLC N/A GO:0003824 ... O66934 40419759
    936958 8zyi:B (1.657) BS01 GLC N/A GO:0003824 ... O66934 40419759
    936959 8zyi:B (1.657) BS02 GLC N/A GO:0003824 ... O66934 40419759
    936960 8zyi:B (1.657) BS03 GLC N/A GO:0003824 ... O66934 40419759
    936961 8zyi:B (1.657) BS04 GLC N/A GO:0003824 ... O66934 40419759
    936962 8zyi:B (1.657) BS05 GLC N/A GO:0003824 ... O66934 40419759
    936963 8zyj:A (2.37) BS01 MG N/A GO:0000166 ... Q13733 39596464
    936964 8zyj:A (2.37) BS02 CLR N/A GO:0000166 ... Q13733 39596464
    936965 8zyj:A (2.37) BS03 OBN N/A GO:0000166 ... Q13733 39596464
    936966 8zyj:A (2.37) BS04 Q7G N/A GO:0000166 ... Q13733 39596464
    936967 8zyj:A (2.37) BS05 Q7G N/A GO:0000166 ... Q13733 39596464
    936968 8zyj:A (2.37) BS06 Q7G N/A GO:0000166 ... Q13733 39596464
    936969 8zyj:B (2.37) BS01 Q7G N/A GO:0001666 ... P05026 39596464
    936970 8zyo:A (3.29) BS01 XB7 N/A GO:0005216 ... Q12809 39321803
    936971 8zyo:B (3.29) BS01 XB7 N/A GO:0005216 ... Q12809 39321803
    936972 8zyo:D (3.29) BS01 XB7 N/A GO:0005216 ... Q12809 39321803
    936973 8zyp:A (3.19) BS01 A1L2J N/A GO:0005216 ... Q12809 39321803
    936974 8zyp:C (3.19) BS01 A1L2J N/A GO:0005216 ... Q12809 39321803
    936975 8zyp:D (3.19) BS01 A1L2J N/A GO:0005216 ... Q12809 39321803
    936976 8zyq:A (3.18) BS01 1II N/A GO:0005216 ... Q12809 39321803
    936977 8zyq:B (3.18) BS01 1II N/A GO:0005216 ... Q12809 39321803
    936978 8zyq:C (3.18) BS01 1II N/A GO:0005216 ... Q12809 39321803
    936979 8zyq:D (3.18) BS01 1II N/A GO:0005216 ... Q12809 39321803
    936980 8zyr:A (4.07) BS01 H6P N/A GO:0001817 ... Q7KYR7 40334665
    936981 8zyr:B (4.07) BS01 H6P N/A GO:0001817 ... O00481 40334665
    936982 8zys:A (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936983 8zys:A (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936984 8zys:B (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936985 8zys:B (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936986 8zys:B (2.0) BS03 dna N/A GO:0003700 ... Q4G112 N/A
    936987 8zys:C (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936988 8zys:C (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936989 8zys:D (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936990 8zys:D (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936991 8zys:E (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936992 8zys:E (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936993 8zys:E (2.0) BS03 dna N/A GO:0003700 ... Q4G112 N/A
    936994 8zys:F (2.0) BS01 dna N/A GO:0003700 ... Q4G112 N/A
    936995 8zys:F (2.0) BS02 dna N/A GO:0003700 ... Q4G112 N/A
    936996 8zyt:B (2.65) BS01 PIO N/A GO:0000139 ... P49407 40118988
    936997 8zyt:R (2.65) BS01 peptide N/A GO:0001659 ... P30989 40118988
    936998 8zyt:R (2.65) BS02 PIO N/A GO:0001659 ... P30989 40118988
    936999 8zyt:R (2.65) BS03 SRW N/A GO:0001659 ... P30989 40118988
    937000 8zyu:B (2.65) BS01 PIO N/A GO:0000139 ... P49407 40118988

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).