SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    937201 9g8o:B (3.4) BS01 rna N/A GO:0000791 ... Q6PGP7 39385025
    937202 9g8o:I (3.4) BS01 rna N/A GO:0000175 ... Q13868 39385025
    937203 9g8o:J (3.4) BS01 rna N/A GO:0000176 ... Q9Y3B2 39385025
    937204 9g8o:K (3.4) BS01 rna N/A GO:0000175 ... Q06265 39385025
    937205 9g8o:M (3.4) BS01 rna N/A GO:0000175 ... Q8TF46 39385025
    937206 9g8o:N (3.4) BS01 rna N/A GO:0000175 ... Q9NPD3 39385025
    937207 9g8o:SA (3.4) BS01 rna N/A GO:0000028 ... P08865 39385025
    937208 9g8o:SB (3.4) BS01 rna N/A GO:0002181 ... P61247 39385025
    937209 9g8o:SC (3.4) BS01 rna N/A GO:0002181 ... P15880 39385025
    937210 9g8o:SD (3.4) BS01 rna N/A GO:0000977 ... P23396 39385025
    937211 9g8o:SD (3.4) BS02 rna N/A GO:0000977 ... P23396 39385025
    937212 9g8o:SE (3.4) BS01 rna N/A GO:0002181 ... P62701 39385025
    937213 9g8o:SF (3.4) BS01 rna N/A GO:0000028 ... P46782 39385025
    937214 9g8o:SF (3.4) BS02 rna N/A GO:0000028 ... P46782 39385025
    937215 9g8o:SG (3.4) BS01 rna N/A GO:0000082 ... P62753 39385025
    937216 9g8o:SH (3.4) BS01 rna N/A GO:0001843 ... P62081 39385025
    937217 9g8o:SI (3.4) BS01 rna N/A GO:0000462 ... P62241 39385025
    937218 9g8o:SJ (3.4) BS01 rna N/A GO:0002181 ... P46781 39385025
    937219 9g8o:SK (3.4) BS01 rna N/A GO:0002181 ... P46783 39385025
    937220 9g8o:SL (3.4) BS01 rna N/A GO:0002181 ... P62280 39385025
    937221 9g8o:SM (3.4) BS01 rna N/A GO:0002181 ... P25398 39385025
    937222 9g8o:SN (3.4) BS01 rna N/A GO:0002181 ... P62277 39385025
    937223 9g8o:SO (3.4) BS01 rna N/A GO:0000028 ... P62263 39385025
    937224 9g8o:SP (3.4) BS01 rna N/A GO:0000028 ... P62841 39385025
    937225 9g8o:SQ (3.4) BS01 rna N/A GO:0000462 ... P62249 39385025
    937226 9g8o:SR (3.4) BS01 rna N/A GO:0002181 ... P08708 39385025
    937227 9g8o:SS (3.4) BS01 rna N/A GO:0002181 ... P62269 39385025
    937228 9g8o:ST (3.4) BS01 rna N/A GO:0000028 ... P39019 39385025
    937229 9g8o:SU (3.4) BS01 rna N/A GO:0002181 ... P60866 39385025
    937230 9g8o:SW (3.4) BS01 rna N/A GO:0002181 ... P62244 39385025
    937231 9g8o:SX (3.4) BS01 rna N/A GO:0002181 ... P62266 39385025
    937232 9g8o:SY (3.4) BS01 rna N/A GO:0002181 ... P62847 39385025
    937233 9g8o:SZ (3.4) BS01 rna N/A GO:0002181 ... P62851 39385025
    937234 9g8o:SZ (3.4) BS02 rna N/A GO:0002181 ... P62851 39385025
    937235 9g8o:Sa (3.4) BS01 rna N/A GO:0002181 ... P62854 39385025
    937236 9g8o:Sb (3.4) BS01 rna N/A GO:0000028 ... P42677 39385025
    937237 9g8o:Sc (3.4) BS01 rna N/A GO:0000028 ... P62857 39385025
    937238 9g8o:Sd (3.4) BS01 rna N/A GO:0002181 ... P62273 39385025
    937239 9g8o:Se (3.4) BS01 rna N/A N/A P62861 39385025
    937240 9g8o:Se (3.4) BS02 rna N/A N/A P62861 39385025
    937241 9g8o:Sf (3.4) BS01 rna N/A GO:0002181 ... P62979 39385025
    937242 9g8p:A (7.0) BS01 rna N/A GO:0003723 ... Q15477 39385025
    937243 9g8p:I (7.0) BS01 rna N/A GO:0000175 ... Q13868 39385025
    937244 9g8p:J (7.0) BS01 rna N/A GO:0000176 ... Q9Y3B2 39385025
    937245 9g8p:K (7.0) BS01 rna N/A GO:0000175 ... Q06265 39385025
    937246 9g8p:L (7.0) BS01 rna N/A GO:0000175 ... Q9NPD3 39385025
    937247 9g8p:M (7.0) BS01 rna N/A GO:0000175 ... Q8TF46 39385025
    937248 9g8r:B (3.4) BS01 peptide N/A GO:0000791 ... Q6PGP7 39385025
    937249 9g8u:A (3.174) BS01 CA N/A N/A D0CCR9 39904335
    937250 9g91:A (1.78) BS01 A1II3 N/A N/A Q7Z4V5 39461037
    937251 9g91:B (1.78) BS01 A1II3 N/A N/A Q7Z4V5 39461037
    937252 9g94:A (1.73) BS01 A1D73 N/A N/A Q7Z4V5 39461037
    937253 9g94:B (1.73) BS01 A1D73 N/A N/A Q7Z4V5 39461037
    937254 9g94:C (1.73) BS01 A1D73 N/A N/A Q7Z4V5 39461037
    937255 9g95:A (2.8) BS01 MPG N/A N/A P0AAA7 39772807
    937256 9g95:A (2.8) BS02 MPG N/A N/A P0AAA7 39772807
    937257 9g95:A (2.8) BS03 MPG N/A N/A P0AAA7 39772807
    937258 9g95:A (2.8) BS04 MPG N/A N/A P0AAA7 39772807
    937259 9g95:A (2.8) BS05 MPG N/A N/A P0AAA7 39772807
    937260 9g96:A (1.94) BS01 A1II2 N/A N/A Q7Z4V5 39461037
    937261 9g96:B (1.94) BS01 A1II2 N/A N/A Q7Z4V5 39461037
    937262 9g97:A (2.31) BS01 MPG N/A N/A P0AAA7 39772807
    937263 9g97:A (2.31) BS02 MPG N/A N/A P0AAA7 39772807
    937264 9g97:A (2.31) BS03 MPG N/A N/A P0AAA7 39772807
    937265 9g97:A (2.31) BS04 MPG N/A N/A P0AAA7 39772807
    937266 9g97:A (2.31) BS05 MPG N/A N/A P0AAA7 39772807
    937267 9g97:A (2.31) BS06 MPG N/A N/A P0AAA7 39772807
    937268 9g97:A (2.31) BS07 MPG N/A N/A P0AAA7 39772807
    937269 9g97:A (2.31) BS08 LOP N/A N/A P0AAA7 39772807
    937270 9g9a:A (2.83) BS01 rna N/A N/A E6LHV7 39817514
    937271 9g9a:D (2.83) BS01 rna N/A N/A E6LHV5 39817514
    937272 9g9a:E (2.83) BS01 rna N/A N/A E6LHV5 39817514
    937273 9g9a:F (2.83) BS01 rna N/A N/A E6LHV5 39817514
    937274 9g9a:G (2.83) BS01 rna N/A N/A E6LHV4 39817514
    937275 9g9a:H (2.83) BS01 rna N/A N/A E6LHV3 39817514
    937276 9g9b:A (3.07) BS01 rna N/A N/A E6LHV7 39817514
    937277 9g9b:D (3.07) BS01 rna N/A N/A E6LHV5 39817514
    937278 9g9b:E (3.07) BS01 rna N/A N/A E6LHV5 39817514
    937279 9g9b:F (3.07) BS01 rna N/A N/A E6LHV5 39817514
    937280 9g9b:G (3.07) BS01 rna N/A N/A E6LHV4 39817514
    937281 9g9b:H (3.07) BS01 rna N/A N/A E6LHV3 39817514
    937282 9g9b:I (3.07) BS01 rna N/A N/A E6LHV5 39817514
    937283 9g9c:A (2.72) BS01 rna N/A N/A E6LHV7 39817514
    937284 9g9c:A (2.72) BS02 rna N/A N/A E6LHV7 39817514
    937285 9g9c:B (2.72) BS01 rna N/A N/A E6LHV6 39817514
    937286 9g9c:C (2.72) BS01 rna N/A N/A E6LHV6 39817514
    937287 9g9c:D (2.72) BS01 rna N/A N/A E6LHV5 39817514
    937288 9g9c:D (2.72) BS02 rna N/A N/A E6LHV5 39817514
    937289 9g9c:E (2.72) BS01 rna N/A N/A E6LHV5 39817514
    937290 9g9c:E (2.72) BS02 rna N/A N/A E6LHV5 39817514
    937291 9g9c:F (2.72) BS01 rna N/A N/A E6LHV5 39817514
    937292 9g9c:F (2.72) BS02 rna N/A N/A E6LHV5 39817514
    937293 9g9c:G (2.72) BS01 rna N/A N/A E6LHV4 39817514
    937294 9g9c:G (2.72) BS02 rna N/A N/A E6LHV4 39817514
    937295 9g9c:H (2.72) BS01 rna N/A N/A E6LHV3 39817514
    937296 9g9c:H (2.72) BS02 rna N/A N/A E6LHV3 39817514
    937297 9g9d:A (2.9) BS01 rna N/A N/A E6LHV7 39817514
    937298 9g9d:A (2.9) BS02 rna N/A N/A E6LHV7 39817514
    937299 9g9d:B (2.9) BS01 rna N/A N/A E6LHV6 39817514
    937300 9g9d:C (2.9) BS01 rna N/A N/A E6LHV6 39817514
    937301 9g9d:D (2.9) BS01 rna N/A N/A E6LHV5 39817514
    937302 9g9d:D (2.9) BS02 rna N/A N/A E6LHV5 39817514
    937303 9g9d:E (2.9) BS01 rna N/A N/A E6LHV5 39817514
    937304 9g9d:E (2.9) BS02 rna N/A N/A E6LHV5 39817514
    937305 9g9d:F (2.9) BS01 rna N/A N/A E6LHV5 39817514
    937306 9g9d:F (2.9) BS02 rna N/A N/A E6LHV5 39817514
    937307 9g9d:G (2.9) BS01 rna N/A N/A E6LHV4 39817514
    937308 9g9d:G (2.9) BS02 rna N/A N/A E6LHV4 39817514
    937309 9g9d:H (2.9) BS01 rna N/A N/A E6LHV3 39817514
    937310 9g9d:H (2.9) BS02 rna N/A N/A E6LHV3 39817514
    937311 9g9d:I (2.9) BS01 rna N/A N/A E6LHV5 39817514
    937312 9g9d:I (2.9) BS02 rna N/A N/A E6LHV5 39817514
    937313 9g9d:J (2.9) BS01 rna N/A N/A E6LHV6 39817514
    937314 9g9e:A (2.87) BS01 ZAN N/A N/A E6LHV7 39817514
    937315 9g9e:A (2.87) BS02 ZAN N/A N/A E6LHV7 39817514
    937316 9g9e:A (2.87) BS03 MG N/A N/A E6LHV7 39817514
    937317 9g9e:A (2.87) BS04 MG N/A N/A E6LHV7 39817514
    937318 9g9e:D (2.87) BS01 rna N/A N/A E6LHV5 39817514
    937319 9g9e:E (2.87) BS01 rna N/A N/A E6LHV5 39817514
    937320 9g9e:F (2.87) BS01 rna N/A N/A E6LHV5 39817514
    937321 9g9e:G (2.87) BS01 rna N/A N/A E6LHV4 39817514
    937322 9g9e:G (2.87) BS02 ZAN N/A N/A E6LHV4 39817514
    937323 9g9e:H (2.87) BS01 rna N/A N/A E6LHV3 39817514
    937324 9g9f:A (2.93) BS01 rna N/A N/A E6LHV7 39817514
    937325 9g9f:A (2.93) BS02 ZAN N/A N/A E6LHV7 39817514
    937326 9g9f:A (2.93) BS03 ZAN N/A N/A E6LHV7 39817514
    937327 9g9f:A (2.93) BS04 MG N/A N/A E6LHV7 39817514
    937328 9g9f:B (2.93) BS01 rna N/A N/A E6LHV6 39817514
    937329 9g9f:C (2.93) BS01 rna N/A N/A E6LHV6 39817514
    937330 9g9f:D (2.93) BS01 rna N/A N/A E6LHV5 39817514
    937331 9g9f:D (2.93) BS02 rna N/A N/A E6LHV5 39817514
    937332 9g9f:E (2.93) BS01 rna N/A N/A E6LHV5 39817514
    937333 9g9f:E (2.93) BS02 rna N/A N/A E6LHV5 39817514
    937334 9g9f:F (2.93) BS01 rna N/A N/A E6LHV5 39817514
    937335 9g9f:F (2.93) BS02 rna N/A N/A E6LHV5 39817514
    937336 9g9f:G (2.93) BS01 rna N/A N/A E6LHV4 39817514
    937337 9g9f:G (2.93) BS02 rna N/A N/A E6LHV4 39817514
    937338 9g9f:H (2.93) BS01 rna N/A N/A E6LHV3 39817514
    937339 9g9f:H (2.93) BS02 rna N/A N/A E6LHV3 39817514
    937340 9g9g:A (3.38) BS01 rna N/A N/A E6LHV7 39817514
    937341 9g9g:A (3.38) BS02 rna N/A N/A E6LHV7 39817514
    937342 9g9g:A (3.38) BS03 ZAN N/A N/A E6LHV7 39817514
    937343 9g9g:A (3.38) BS04 ZAN N/A N/A E6LHV7 39817514
    937344 9g9g:A (3.38) BS05 MG N/A N/A E6LHV7 39817514
    937345 9g9g:A (3.38) BS06 MG N/A N/A E6LHV7 39817514
    937346 9g9g:B (3.38) BS01 rna N/A N/A E6LHV6 39817514
    937347 9g9g:C (3.38) BS01 rna N/A N/A E6LHV6 39817514
    937348 9g9g:D (3.38) BS01 rna N/A N/A E6LHV5 39817514
    937349 9g9g:D (3.38) BS02 rna N/A N/A E6LHV5 39817514
    937350 9g9g:E (3.38) BS01 rna N/A N/A E6LHV5 39817514
    937351 9g9g:E (3.38) BS02 rna N/A N/A E6LHV5 39817514
    937352 9g9g:F (3.38) BS01 rna N/A N/A E6LHV5 39817514
    937353 9g9g:F (3.38) BS02 rna N/A N/A E6LHV5 39817514
    937354 9g9g:G (3.38) BS01 rna N/A N/A E6LHV4 39817514
    937355 9g9g:G (3.38) BS02 rna N/A N/A E6LHV4 39817514
    937356 9g9g:H (3.38) BS01 rna N/A N/A E6LHV3 39817514
    937357 9g9g:H (3.38) BS02 rna N/A N/A E6LHV3 39817514
    937358 9g9g:I (3.38) BS01 rna N/A N/A E6LHV5 39817514
    937359 9g9g:I (3.38) BS02 rna N/A N/A E6LHV5 39817514
    937360 9g9g:J (3.38) BS01 rna N/A N/A E6LHV6 39817514
    937361 9g9h:A (2.99) BS01 rna N/A N/A E6LHV7 39817514
    937362 9g9h:A (2.99) BS02 rna N/A N/A E6LHV7 39817514
    937363 9g9h:A (2.99) BS03 A1II9 N/A N/A E6LHV7 39817514
    937364 9g9h:A (2.99) BS04 ANP N/A N/A E6LHV7 39817514
    937365 9g9h:B (2.99) BS01 rna N/A N/A E6LHV6 39817514
    937366 9g9h:C (2.99) BS01 rna N/A N/A E6LHV6 39817514
    937367 9g9h:D (2.99) BS01 rna N/A N/A E6LHV5 39817514
    937368 9g9h:D (2.99) BS02 rna N/A N/A E6LHV5 39817514
    937369 9g9h:E (2.99) BS01 rna N/A N/A E6LHV5 39817514
    937370 9g9h:E (2.99) BS02 rna N/A N/A E6LHV5 39817514
    937371 9g9h:F (2.99) BS01 rna N/A N/A E6LHV5 39817514
    937372 9g9h:F (2.99) BS02 rna N/A N/A E6LHV5 39817514
    937373 9g9h:G (2.99) BS01 rna N/A N/A E6LHV4 39817514
    937374 9g9h:G (2.99) BS02 rna N/A N/A E6LHV4 39817514
    937375 9g9h:H (2.99) BS01 rna N/A N/A E6LHV3 39817514
    937376 9g9h:H (2.99) BS02 rna N/A N/A E6LHV3 39817514
    937377 9g9i:A (3.31) BS01 rna N/A N/A E6LHV7 39817514
    937378 9g9i:A (3.31) BS02 rna N/A N/A E6LHV7 39817514
    937379 9g9i:A (3.31) BS03 A1II9 N/A N/A E6LHV7 39817514
    937380 9g9i:A (3.31) BS04 ANP N/A N/A E6LHV7 39817514
    937381 9g9i:A (3.31) BS05 MG N/A N/A E6LHV7 39817514
    937382 9g9i:D (3.31) BS01 rna N/A N/A E6LHV5 39817514
    937383 9g9i:D (3.31) BS02 rna N/A N/A E6LHV5 39817514
    937384 9g9i:E (3.31) BS01 rna N/A N/A E6LHV5 39817514
    937385 9g9i:E (3.31) BS02 rna N/A N/A E6LHV5 39817514
    937386 9g9i:F (3.31) BS01 rna N/A N/A E6LHV5 39817514
    937387 9g9i:F (3.31) BS02 rna N/A N/A E6LHV5 39817514
    937388 9g9i:G (3.31) BS01 rna N/A N/A E6LHV4 39817514
    937389 9g9i:G (3.31) BS02 rna N/A N/A E6LHV4 39817514
    937390 9g9i:G (3.31) BS03 A1II9 N/A N/A E6LHV4 39817514
    937391 9g9i:H (3.31) BS01 rna N/A N/A E6LHV3 39817514
    937392 9g9j:A (3.05) BS01 A1II9 N/A N/A E6LHV7 39817514
    937393 9g9j:A (3.05) BS02 ANP N/A N/A E6LHV7 39817514
    937394 9g9j:A (3.05) BS03 MN N/A N/A E6LHV7 39817514
    937395 9g9j:A (3.05) BS04 MN N/A N/A E6LHV7 39817514
    937396 9g9j:D (3.05) BS01 rna N/A N/A E6LHV5 39817514
    937397 9g9j:E (3.05) BS01 rna N/A N/A E6LHV5 39817514
    937398 9g9j:F (3.05) BS01 rna N/A N/A E6LHV5 39817514
    937399 9g9j:G (3.05) BS01 rna N/A N/A E6LHV4 39817514
    937400 9g9j:G (3.05) BS02 A1II9 N/A N/A E6LHV4 39817514

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).