SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    937601 9au4:a (2.03) BS15 CLA N/A GO:0000287 ... P29254 39612342
    937602 9au4:a (2.03) BS16 CLA N/A GO:0000287 ... P29254 39612342
    937603 9au4:a (2.03) BS17 CLA N/A GO:0000287 ... P29254 39612342
    937604 9au4:a (2.03) BS18 CLA N/A GO:0000287 ... P29254 39612342
    937605 9au4:a (2.03) BS19 CLA N/A GO:0000287 ... P29254 39612342
    937606 9au4:a (2.03) BS20 CLA N/A GO:0000287 ... P29254 39612342
    937607 9au4:a (2.03) BS21 CLA N/A GO:0000287 ... P29254 39612342
    937608 9au4:a (2.03) BS22 CLA N/A GO:0000287 ... P29254 39612342
    937609 9au4:a (2.03) BS23 CLA N/A GO:0000287 ... P29254 39612342
    937610 9au4:a (2.03) BS24 CLA N/A GO:0000287 ... P29254 39612342
    937611 9au4:a (2.03) BS25 CLA N/A GO:0000287 ... P29254 39612342
    937612 9au4:a (2.03) BS26 CLA N/A GO:0000287 ... P29254 39612342
    937613 9au4:a (2.03) BS27 CLA N/A GO:0000287 ... P29254 39612342
    937614 9au4:a (2.03) BS28 CLA N/A GO:0000287 ... P29254 39612342
    937615 9au4:a (2.03) BS29 CLA N/A GO:0000287 ... P29254 39612342
    937616 9au4:a (2.03) BS30 CLA N/A GO:0000287 ... P29254 39612342
    937617 9au4:a (2.03) BS31 CLA N/A GO:0000287 ... P29254 39612342
    937618 9au4:a (2.03) BS32 CLA N/A GO:0000287 ... P29254 39612342
    937619 9au4:a (2.03) BS33 CLA N/A GO:0000287 ... P29254 39612342
    937620 9au4:a (2.03) BS34 CLA N/A GO:0000287 ... P29254 39612342
    937621 9au4:a (2.03) BS35 CLA N/A GO:0000287 ... P29254 39612342
    937622 9au4:a (2.03) BS36 CLA N/A GO:0000287 ... P29254 39612342
    937623 9au4:a (2.03) BS37 CLA N/A GO:0000287 ... P29254 39612342
    937624 9au4:a (2.03) BS38 CLA N/A GO:0000287 ... P29254 39612342
    937625 9au4:a (2.03) BS39 CLA N/A GO:0000287 ... P29254 39612342
    937626 9au4:a (2.03) BS40 CLA N/A GO:0000287 ... P29254 39612342
    937627 9au4:a (2.03) BS41 A1AGD N/A GO:0000287 ... P29254 39612342
    937628 9au4:a (2.03) BS42 SF4 N/A GO:0000287 ... P29254 39612342
    937629 9au4:a (2.03) BS43 CLA N/A GO:0000287 ... P29254 39612342
    937630 9au4:a (2.03) BS44 CLA N/A GO:0000287 ... P29254 39612342
    937631 9au4:a (2.03) BS45 45D N/A GO:0000287 ... P29254 39612342
    937632 9au4:a (2.03) BS46 CLA N/A GO:0000287 ... P29254 39612342
    937633 9au4:a (2.03) BS47 CLA N/A GO:0000287 ... P29254 39612342
    937634 9au4:a (2.03) BS48 CLA N/A GO:0000287 ... P29254 39612342
    937635 9au4:a (2.03) BS49 CLA N/A GO:0000287 ... P29254 39612342
    937636 9au4:a (2.03) BS50 CLA N/A GO:0000287 ... P29254 39612342
    937637 9au4:a (2.03) BS51 CLA N/A GO:0000287 ... P29254 39612342
    937638 9au4:a (2.03) BS52 CLA N/A GO:0000287 ... P29254 39612342
    937639 9au4:a (2.03) BS53 CLA N/A GO:0000287 ... P29254 39612342
    937640 9au4:b (2.03) BS01 CLA N/A GO:0000287 ... P29255 39612342
    937641 9au4:b (2.03) BS02 CLA N/A GO:0000287 ... P29255 39612342
    937642 9au4:b (2.03) BS03 CLA N/A GO:0000287 ... P29255 39612342
    937643 9au4:b (2.03) BS04 CLA N/A GO:0000287 ... P29255 39612342
    937644 9au4:b (2.03) BS05 SF4 N/A GO:0000287 ... P29255 39612342
    937645 9au4:b (2.03) BS06 CLA N/A GO:0000287 ... P29255 39612342
    937646 9au4:b (2.03) BS07 CLA N/A GO:0000287 ... P29255 39612342
    937647 9au4:b (2.03) BS08 CLA N/A GO:0000287 ... P29255 39612342
    937648 9au4:b (2.03) BS09 CLA N/A GO:0000287 ... P29255 39612342
    937649 9au4:b (2.03) BS10 CLA N/A GO:0000287 ... P29255 39612342
    937650 9au4:b (2.03) BS11 CLA N/A GO:0000287 ... P29255 39612342
    937651 9au4:b (2.03) BS12 CLA N/A GO:0000287 ... P29255 39612342
    937652 9au4:b (2.03) BS13 CLA N/A GO:0000287 ... P29255 39612342
    937653 9au4:b (2.03) BS14 CLA N/A GO:0000287 ... P29255 39612342
    937654 9au4:b (2.03) BS15 CLA N/A GO:0000287 ... P29255 39612342
    937655 9au4:b (2.03) BS16 CLA N/A GO:0000287 ... P29255 39612342
    937656 9au4:b (2.03) BS17 CLA N/A GO:0000287 ... P29255 39612342
    937657 9au4:b (2.03) BS18 CLA N/A GO:0000287 ... P29255 39612342
    937658 9au4:b (2.03) BS19 CLA N/A GO:0000287 ... P29255 39612342
    937659 9au4:b (2.03) BS20 CLA N/A GO:0000287 ... P29255 39612342
    937660 9au4:b (2.03) BS21 CLA N/A GO:0000287 ... P29255 39612342
    937661 9au4:b (2.03) BS22 CLA N/A GO:0000287 ... P29255 39612342
    937662 9au4:b (2.03) BS23 CLA N/A GO:0000287 ... P29255 39612342
    937663 9au4:b (2.03) BS24 CLA N/A GO:0000287 ... P29255 39612342
    937664 9au4:b (2.03) BS25 CLA N/A GO:0000287 ... P29255 39612342
    937665 9au4:b (2.03) BS26 CLA N/A GO:0000287 ... P29255 39612342
    937666 9au4:b (2.03) BS27 CLA N/A GO:0000287 ... P29255 39612342
    937667 9au4:b (2.03) BS28 CLA N/A GO:0000287 ... P29255 39612342
    937668 9au4:b (2.03) BS29 CLA N/A GO:0000287 ... P29255 39612342
    937669 9au4:b (2.03) BS30 CLA N/A GO:0000287 ... P29255 39612342
    937670 9au4:b (2.03) BS31 CLA N/A GO:0000287 ... P29255 39612342
    937671 9au4:b (2.03) BS32 CLA N/A GO:0000287 ... P29255 39612342
    937672 9au4:b (2.03) BS33 CLA N/A GO:0000287 ... P29255 39612342
    937673 9au4:b (2.03) BS34 CLA N/A GO:0000287 ... P29255 39612342
    937674 9au4:b (2.03) BS35 CLA N/A GO:0000287 ... P29255 39612342
    937675 9au4:b (2.03) BS36 CLA N/A GO:0000287 ... P29255 39612342
    937676 9au4:b (2.03) BS37 CLA N/A GO:0000287 ... P29255 39612342
    937677 9au4:b (2.03) BS38 CLA N/A GO:0000287 ... P29255 39612342
    937678 9au4:b (2.03) BS39 CLA N/A GO:0000287 ... P29255 39612342
    937679 9au4:b (2.03) BS40 CLA N/A GO:0000287 ... P29255 39612342
    937680 9au4:b (2.03) BS41 CLA N/A GO:0000287 ... P29255 39612342
    937681 9au4:b (2.03) BS42 CLA N/A GO:0000287 ... P29255 39612342
    937682 9au4:b (2.03) BS43 CLA N/A GO:0000287 ... P29255 39612342
    937683 9au4:b (2.03) BS44 CLA N/A GO:0000287 ... P29255 39612342
    937684 9au4:b (2.03) BS45 CLA N/A GO:0000287 ... P29255 39612342
    937685 9au4:b (2.03) BS46 CLA N/A GO:0000287 ... P29255 39612342
    937686 9au4:b (2.03) BS47 CLA N/A GO:0000287 ... P29255 39612342
    937687 9au4:b (2.03) BS48 ECH N/A GO:0000287 ... P29255 39612342
    937688 9au4:b (2.03) BS49 ZEX N/A GO:0000287 ... P29255 39612342
    937689 9au4:b (2.03) BS50 CLA N/A GO:0000287 ... P29255 39612342
    937690 9au4:b (2.03) BS51 A1AGD N/A GO:0000287 ... P29255 39612342
    937691 9au4:b (2.03) BS52 CLA N/A GO:0000287 ... P29255 39612342
    937692 9au4:b (2.03) BS53 ECH N/A GO:0000287 ... P29255 39612342
    937693 9au4:c (2.03) BS01 SF4 N/A GO:0009055 ... P32422 39612342
    937694 9au4:c (2.03) BS02 SF4 N/A GO:0009055 ... P32422 39612342
    937695 9au4:f (2.03) BS01 CLA N/A GO:0009522 ... P29256 39612342
    937696 9au4:f (2.03) BS02 CLA N/A GO:0009522 ... P29256 39612342
    937697 9au4:f (2.03) BS03 CLA N/A GO:0009522 ... P29256 39612342
    937698 9au4:f (2.03) BS04 CLA N/A GO:0009522 ... P29256 39612342
    937699 9au4:f (2.03) BS05 CLA N/A GO:0009522 ... P29256 39612342
    937700 9au4:f (2.03) BS06 CLA N/A GO:0009522 ... P29256 39612342
    937701 9au4:f (2.03) BS07 ZEX N/A GO:0009522 ... P29256 39612342
    937702 9au4:i (2.03) BS01 CLA N/A GO:0009522 ... Q55330 39612342
    937703 9au4:i (2.03) BS02 ECH N/A GO:0009522 ... Q55330 39612342
    937704 9au4:i (2.03) BS03 CLA N/A GO:0009522 ... Q55330 39612342
    937705 9au4:j (2.03) BS01 CLA N/A GO:0009522 ... Q55329 39612342
    937706 9au4:j (2.03) BS02 CLA N/A GO:0009522 ... Q55329 39612342
    937707 9au4:j (2.03) BS03 ZEX N/A GO:0009522 ... Q55329 39612342
    937708 9au4:j (2.03) BS04 CLA N/A GO:0009522 ... Q55329 39612342
    937709 9au4:j (2.03) BS05 CLA N/A GO:0009522 ... Q55329 39612342
    937710 9au4:j (2.03) BS06 CLA N/A GO:0009522 ... Q55329 39612342
    937711 9au4:k (2.03) BS01 CLA N/A GO:0009522 ... P74564 39612342
    937712 9au4:k (2.03) BS02 CLA N/A GO:0009522 ... P74564 39612342
    937713 9au4:k (2.03) BS03 CLA N/A GO:0009522 ... P74564 39612342
    937714 9au4:k (2.03) BS04 CLA N/A GO:0009522 ... P74564 39612342
    937715 9au4:l (2.03) BS01 CLA N/A GO:0005886 ... P37277 39612342
    937716 9au4:l (2.03) BS02 CLA N/A GO:0005886 ... P37277 39612342
    937717 9au4:l (2.03) BS03 CLA N/A GO:0005886 ... P37277 39612342
    937718 9au4:l (2.03) BS04 CLA N/A GO:0005886 ... P37277 39612342
    937719 9au4:l (2.03) BS05 CLA N/A GO:0005886 ... P37277 39612342
    937720 9au4:l (2.03) BS06 CLA N/A GO:0005886 ... P37277 39612342
    937721 9au4:l (2.03) BS07 EQ3 N/A GO:0005886 ... P37277 39612342
    937722 9au4:l (2.03) BS08 CLA N/A GO:0005886 ... P37277 39612342
    937723 9au4:l (2.03) BS09 CA N/A GO:0005886 ... P37277 39612342
    937724 9au4:l (2.03) BS10 CLA N/A GO:0005886 ... P37277 39612342
    937725 9au4:l (2.03) BS11 CLA N/A GO:0005886 ... P37277 39612342
    937726 9au4:l (2.03) BS12 CLA N/A GO:0005886 ... P37277 39612342
    937727 9au4:l (2.03) BS13 CLA N/A GO:0005886 ... P37277 39612342
    937728 9au4:m (2.03) BS01 CLA N/A GO:0015979 ... P72986 39612342
    937729 9au4:m (2.03) BS02 ECH N/A GO:0015979 ... P72986 39612342
    937730 9au5:A (3.11) BS01 dna N/A GO:0003676 ... O75417 40021647
    937731 9au5:A (3.11) BS02 dna N/A GO:0003676 ... O75417 40021647
    937732 9au5:A (3.11) BS03 DGT N/A GO:0003676 ... O75417 40021647
    937733 9au5:A (3.11) BS04 MG N/A GO:0003676 ... O75417 40021647
    937734 9au7:A (3.4) BS01 peptide N/A GO:0005515 ... Q7Z3J2 39587083
    937735 9au8:A (3.44) BS01 dna N/A GO:0003676 ... O75417 40021647
    937736 9au8:A (3.44) BS02 dna N/A GO:0003676 ... O75417 40021647
    937737 9au8:A (3.44) BS03 TTP N/A GO:0003676 ... O75417 40021647
    937738 9au9:A (3.32) BS01 dna N/A GO:0003676 ... O75417 40021647
    937739 9au9:A (3.32) BS02 dna N/A GO:0003676 ... O75417 40021647
    937740 9au9:A (3.32) BS03 DGT N/A GO:0003676 ... O75417 40021647
    937741 9aua:A (1.29) BS01 AN7 N/A GO:0019346 ... N/A 40562852
    937742 9auc:R (2.4) BS01 Y01 ? GO:0001540 ... P30988 38603770
    937743 9auc:R (2.4) BS02 Y01 ? GO:0001540 ... P30988 38603770
    937744 9aue:A (1.46) BS01 PMP N/A GO:0030170 ... Q70KE6 39207862
    937745 9auf:A (2.73) BS01 rna N/A GO:0003676 ... A0ACD6BA15 39774105
    937746 9auf:A (2.73) BS02 dna N/A GO:0003676 ... A0ACD6BA15 39774105
    937747 9auf:A (2.73) BS03 dna N/A GO:0003676 ... A0ACD6BA15 39774105
    937748 9auf:A (2.73) BS04 dna N/A GO:0003676 ... A0ACD6BA15 39774105
    937749 9aug:G (3.8) BS01 MAN N/A N/A N/A 39772772
    937750 9aug:H (3.8) BS01 MAN N/A N/A N/A 39772772
    937751 9aug:I (3.8) BS01 MAN N/A N/A N/A 39772772
    937752 9aug:L (3.8) BS01 MAN N/A N/A N/A 39772772
    937753 9auh:G (3.6) BS01 MAN N/A N/A N/A 39772772
    937754 9auh:J (3.6) BS01 MAN N/A N/A N/A 39772772
    937755 9aui:I (3.8) BS01 MAN N/A N/A N/A 39772772
    937756 9aui:L (3.8) BS01 MAN N/A N/A N/A 39772772
    937757 9auj:A (1.486) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    937758 9auk:A (1.88) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    937759 9auk:B (1.88) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    937760 9aul:A (2.421) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    937761 9aum:A (1.539) BS01 4WI N/A GO:0008233 ... P0DTD1 39047088
    937762 9aur:H (1.57) BS01 rna N/A N/A N/A 39178230
    937763 9aur:L (1.57) BS01 rna N/A N/A N/A 39178230
    937764 9aus:A (2.07) BS01 rna N/A N/A N/A 39178230
    937765 9aus:B (2.07) BS01 rna N/A N/A N/A 39178230
    937766 9aus:H (2.07) BS01 rna N/A N/A N/A 39178230
    937767 9aus:L (2.07) BS01 rna N/A N/A N/A 39178230
    937768 9auu:A (2.0) BS01 A1AG2 N/A GO:0005524 ... P07900 39177126
    937769 9auu:A (2.0) BS02 MG N/A GO:0005524 ... P07900 39177126
    937770 9auv:A (1.83) BS01 IMP N/A GO:0003824 ... D0CF46 39207111
    937771 9auv:A (1.83) BS02 VOA N/A GO:0003824 ... D0CF46 39207111
    937772 9auv:A (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937773 9auv:B (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937774 9auv:B (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937775 9auv:B (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937776 9auv:C (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937777 9auv:C (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937778 9auv:C (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937779 9auv:D (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937780 9auv:D (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937781 9auv:D (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937782 9auv:E (1.83) BS01 IMP N/A GO:0003824 ... D0CF46 39207111
    937783 9auv:E (1.83) BS02 VOA N/A GO:0003824 ... D0CF46 39207111
    937784 9auv:E (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937785 9auv:F (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937786 9auv:F (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937787 9auv:F (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937788 9auv:G (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937789 9auv:G (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937790 9auv:G (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937791 9auv:H (1.83) BS01 VOA N/A GO:0003824 ... D0CF46 39207111
    937792 9auv:H (1.83) BS02 IMP N/A GO:0003824 ... D0CF46 39207111
    937793 9auv:H (1.83) BS03 VOA N/A GO:0003824 ... D0CF46 39207111
    937794 9auw:A (2.3) BS01 IMP N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937795 9auw:A (2.3) BS02 VP4 N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937796 9auw:A (2.3) BS03 VP4 N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937797 9auw:B (2.3) BS01 VP4 N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937798 9auw:B (2.3) BS02 IMP N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937799 9auw:B (2.3) BS03 VP4 N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111
    937800 9auw:C (2.3) BS01 VP4 N/A GO:0003824 ... A0A059ZJE9
    P31002
    39207111

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).