SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4679 4680 4681 4682 4683 4684 4685 4686 4687 4688 4689 4690 4691 4692 4693 4694 4695 4696 4697 4698 4699 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    937601 9gcd:AAA (1.798) BS01 A1IJ2 N/A GO:0002003 ... P23946 39541507
    937602 9gcd:AAA (1.798) BS02 ZN N/A GO:0002003 ... P23946 39541507
    937603 9gcf:A (2.89) BS01 A1IJ5 N/A GO:0001779 ... O00329 39635891
    937604 9gch:C (1.9) BS01 rna N/A GO:0000049 ... Q99714 39516281
    937605 9gch:F (1.9) BS01 rna N/A N/A Q7L0Y3 39516281
    937606 9gch:F (1.9) BS02 SAM N/A N/A Q7L0Y3 39516281
    937607 9gcj:A (1.95) BS01 BGC N/A GO:0005829 ... A4XIG7 39361356
    937608 9gcj:B (1.95) BS01 BGC N/A GO:0005829 ... A4XIG7 39361356
    937609 9gck:A (3.7) BS01 dna N/A GO:0000127 ... P34111 39657784
    937610 9gck:B (3.7) BS01 dna N/A GO:0000127 ... P33339 39657784
    937611 9gck:C (3.7) BS01 dna N/A GO:0000127 ... P32367 39657784
    937612 9gcl:E (3.0) BS01 rna N/A N/A N/A 39809272
    937613 9gcl:F (3.0) BS01 rna N/A N/A N/A 39809272
    937614 9gcl:h (3.0) BS01 rna N/A N/A N/A 39809272
    937615 9gcl:i (3.0) BS01 rna N/A N/A N/A 39809272
    937616 9gcl:j (3.0) BS01 rna N/A N/A N/A 39809272
    937617 9gcl:k (3.0) BS01 rna N/A N/A N/A 39809272
    937618 9gcl:l (3.0) BS01 rna N/A N/A N/A 39809272
    937619 9gcl:m (3.0) BS01 rna N/A N/A N/A 39809272
    937620 9gcl:n (3.0) BS01 rna N/A N/A N/A 39809272
    937621 9gcm:B (3.1) BS01 rna N/A N/A N/A 39809272
    937622 9gcm:C (3.1) BS01 rna N/A N/A N/A 39809272
    937623 9gco:A (2.0) BS01 CA N/A GO:0005737 ... D3V6L5 39613764
    937624 9gco:B (2.0) BS01 CA N/A N/A D3UXR3 39613764
    937625 9gco:C (2.0) BS01 CA N/A N/A D3UXR2 39613764
    937626 9gco:D (2.0) BS01 CA N/A GO:0005737 ... D3V6L5 39613764
    937627 9gcs:B (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937628 9gcs:C (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937629 9gcs:C (3.9) BS02 MG N/A GO:0003723 ... P0AG30 39788982
    937630 9gcs:D (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937631 9gcs:E (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937632 9gcs:E (3.9) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937633 9gcs:F (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937634 9gcs:F (3.9) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937635 9gcs:G (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937636 9gcs:G (3.9) BS02 MG N/A GO:0003723 ... P0AG30 39788982
    937637 9gcs:J (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937638 9gcs:K (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937639 9gcs:K (3.9) BS02 MG N/A GO:0003723 ... P0AG30 39788982
    937640 9gcs:L (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937641 9gcs:L (3.9) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937642 9gcs:M (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937643 9gcs:M (3.9) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937644 9gcs:N (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937645 9gcs:N (3.9) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937646 9gcs:O (3.9) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937647 9gct:A (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937648 9gct:B (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937649 9gct:C (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937650 9gct:C (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937651 9gct:D (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937652 9gct:D (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937653 9gct:E (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937654 9gct:E (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937655 9gct:F (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937656 9gct:G (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937657 9gct:H (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937658 9gct:J (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937659 9gct:K (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937660 9gct:L (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937661 9gct:L (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937662 9gct:M (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937663 9gct:M (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937664 9gct:N (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937665 9gct:N (3.7) BS02 ATP N/A GO:0003723 ... P0AG30 39788982
    937666 9gct:O (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937667 9gct:P (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937668 9gct:Y (3.7) BS01 ATP N/A GO:0003723 ... P0AG30 39788982
    937669 9gcu:B (2.8) BS01 ADP N/A GO:0003723 ... P0AG30 39788982
    937670 9gcu:C (2.8) BS01 ADP N/A GO:0003723 ... P0AG30 39788982
    937671 9gcu:D (2.8) BS01 ADP N/A GO:0003723 ... P0AG30 39788982
    937672 9gcu:E (2.8) BS01 MG N/A GO:0003723 ... P0AG30 39788982
    937673 9gcu:E (2.8) BS02 ADP N/A GO:0003723 ... P0AG30 39788982
    937674 9gcu:E (2.8) BS03 ADP N/A GO:0003723 ... P0AG30 39788982
    937675 9gcu:F (2.8) BS01 ADP N/A GO:0003723 ... P0AG30 39788982
    937676 9gcx:A (3.522) BS01 peptide N/A N/A P31800 39752821
    937677 9gcx:A (3.522) BS02 LOP N/A N/A P31800 39752821
    937678 9gcx:B (3.522) BS01 peptide N/A N/A P23004 39752821
    937679 9gcx:C (3.522) BS01 LOP N/A N/A P00157 39752821
    937680 9gcx:C (3.522) BS02 HEM N/A N/A P00157 39752821
    937681 9gcx:C (3.522) BS03 HEM N/A N/A P00157 39752821
    937682 9gcx:C (3.522) BS04 LOP N/A N/A P00157 39752821
    937683 9gcx:C (3.522) BS05 A1IKG N/A N/A P00157 39752821
    937684 9gcx:C (3.522) BS06 LOP N/A N/A P00157 39752821
    937685 9gcx:C (3.522) BS07 LOP N/A N/A P00157 39752821
    937686 9gcx:C (3.522) BS08 LOP N/A N/A P00157 39752821
    937687 9gcx:C (3.522) BS09 LOP N/A N/A P00157 39752821
    937688 9gcx:D (3.522) BS01 HEC N/A N/A P00125 39752821
    937689 9gcx:D (3.522) BS02 LOP N/A N/A P00125 39752821
    937690 9gcx:E (3.522) BS01 FES N/A N/A P13272 39752821
    937691 9gcx:E (3.522) BS02 LOP N/A N/A P13272 39752821
    937692 9gcx:G (3.522) BS01 LOP N/A N/A P13271 39752821
    937693 9gd0:A (2.8) BS01 dna N/A GO:0000786 ... P84233 39270644
    937694 9gd0:A (2.8) BS02 dna N/A GO:0000786 ... P84233 39270644
    937695 9gd0:B (2.8) BS01 dna N/A GO:0000786 ... P62799 39270644
    937696 9gd0:B (2.8) BS02 dna N/A GO:0000786 ... P62799 39270644
    937697 9gd0:C (2.8) BS01 dna N/A GO:0000786 ... P06897 39270644
    937698 9gd0:C (2.8) BS02 dna N/A GO:0000786 ... P06897 39270644
    937699 9gd0:D (2.8) BS01 dna N/A GO:0000786 ... P02281 39270644
    937700 9gd0:E (2.8) BS01 dna N/A GO:0000786 ... P84233 39270644
    937701 9gd0:E (2.8) BS02 dna N/A GO:0000786 ... P84233 39270644
    937702 9gd0:F (2.8) BS01 dna N/A GO:0000786 ... P62799 39270644
    937703 9gd0:F (2.8) BS02 dna N/A GO:0000786 ... P62799 39270644
    937704 9gd0:G (2.8) BS01 dna N/A GO:0000786 ... P06897 39270644
    937705 9gd0:G (2.8) BS02 dna N/A GO:0000786 ... P06897 39270644
    937706 9gd0:H (2.8) BS01 dna N/A GO:0000786 ... P02281 39270644
    937707 9gd0:H (2.8) BS02 dna N/A GO:0000786 ... P02281 39270644
    937708 9gd0:K (2.8) BS01 dna N/A GO:0000786 ... P84233 39270644
    937709 9gd0:K (2.8) BS02 dna N/A GO:0000786 ... P84233 39270644
    937710 9gd0:L (2.8) BS01 dna N/A GO:0000786 ... P62799 39270644
    937711 9gd0:L (2.8) BS02 dna N/A GO:0000786 ... P62799 39270644
    937712 9gd0:M (2.8) BS01 dna N/A GO:0000786 ... P06897 39270644
    937713 9gd0:M (2.8) BS02 dna N/A GO:0000786 ... P06897 39270644
    937714 9gd0:N (2.8) BS01 dna N/A GO:0000786 ... P02281 39270644
    937715 9gd0:O (2.8) BS01 dna N/A GO:0000786 ... P84233 39270644
    937716 9gd0:O (2.8) BS02 dna N/A GO:0000786 ... P84233 39270644
    937717 9gd0:P (2.8) BS01 dna N/A GO:0000786 ... P62799 39270644
    937718 9gd0:P (2.8) BS02 dna N/A GO:0000786 ... P62799 39270644
    937719 9gd1:A (4.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937720 9gd1:A (4.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937721 9gd1:B (4.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937722 9gd1:B (4.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937723 9gd1:C (4.0) BS01 dna N/A GO:0000786 ... P06897 39270644
    937724 9gd1:C (4.0) BS02 dna N/A GO:0000786 ... P06897 39270644
    937725 9gd1:D (4.0) BS01 dna N/A GO:0000786 ... P02281 39270644
    937726 9gd1:D (4.0) BS02 dna N/A GO:0000786 ... P02281 39270644
    937727 9gd1:E (4.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937728 9gd1:E (4.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937729 9gd1:F (4.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937730 9gd1:F (4.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937731 9gd1:G (4.0) BS01 dna N/A GO:0000786 ... P06897 39270644
    937732 9gd1:G (4.0) BS02 dna N/A GO:0000786 ... P06897 39270644
    937733 9gd1:H (4.0) BS01 dna N/A GO:0000786 ... P02281 39270644
    937734 9gd1:K (4.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937735 9gd1:K (4.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937736 9gd1:L (4.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937737 9gd1:L (4.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937738 9gd1:M (4.0) BS01 dna N/A GO:0000786 ... P06897 39270644
    937739 9gd1:M (4.0) BS02 dna N/A GO:0000786 ... P06897 39270644
    937740 9gd1:N (4.0) BS01 dna N/A GO:0000786 ... P02281 39270644
    937741 9gd1:O (4.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937742 9gd1:O (4.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937743 9gd1:P (4.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937744 9gd1:P (4.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937745 9gd1:W (4.0) BS01 dna N/A GO:0000123 ... P32657 39270644
    937746 9gd1:W (4.0) BS02 dna N/A GO:0000123 ... P32657 39270644
    937747 9gd1:W (4.0) BS03 ADP N/A GO:0000123 ... P32657 39270644
    937748 9gd1:W (4.0) BS04 BEF N/A GO:0000123 ... P32657 39270644
    937749 9gd1:W (4.0) BS05 MG N/A GO:0000123 ... P32657 39270644
    937750 9gd2:A (4.2) BS01 dna N/A GO:0000786 ... P84233 39270644
    937751 9gd2:A (4.2) BS02 dna N/A GO:0000786 ... P84233 39270644
    937752 9gd2:B (4.2) BS01 dna N/A GO:0000786 ... P62799 39270644
    937753 9gd2:B (4.2) BS02 dna N/A GO:0000786 ... P62799 39270644
    937754 9gd2:C (4.2) BS01 dna N/A GO:0000786 ... P06897 39270644
    937755 9gd2:C (4.2) BS02 dna N/A GO:0000786 ... P06897 39270644
    937756 9gd2:C (4.2) BS03 peptide N/A GO:0000786 ... P06897 39270644
    937757 9gd2:D (4.2) BS01 dna N/A GO:0000786 ... P02281 39270644
    937758 9gd2:D (4.2) BS02 peptide N/A GO:0000786 ... P02281 39270644
    937759 9gd2:E (4.2) BS01 dna N/A GO:0000786 ... P84233 39270644
    937760 9gd2:E (4.2) BS02 dna N/A GO:0000786 ... P84233 39270644
    937761 9gd2:E (4.2) BS03 peptide N/A GO:0000786 ... P84233 39270644
    937762 9gd2:F (4.2) BS01 dna N/A GO:0000786 ... P62799 39270644
    937763 9gd2:F (4.2) BS02 dna N/A GO:0000786 ... P62799 39270644
    937764 9gd2:G (4.2) BS01 dna N/A GO:0000786 ... P06897 39270644
    937765 9gd2:G (4.2) BS02 dna N/A GO:0000786 ... P06897 39270644
    937766 9gd2:H (4.2) BS01 dna N/A GO:0000786 ... P02281 39270644
    937767 9gd2:H (4.2) BS02 dna N/A GO:0000786 ... P02281 39270644
    937768 9gd2:K (4.2) BS01 dna N/A GO:0000786 ... P84233 39270644
    937769 9gd2:K (4.2) BS02 dna N/A GO:0000786 ... P84233 39270644
    937770 9gd2:L (4.2) BS01 dna N/A GO:0000786 ... P62799 39270644
    937771 9gd2:L (4.2) BS02 dna N/A GO:0000786 ... P62799 39270644
    937772 9gd2:M (4.2) BS01 dna N/A GO:0000786 ... P06897 39270644
    937773 9gd2:M (4.2) BS02 dna N/A GO:0000786 ... P06897 39270644
    937774 9gd2:N (4.2) BS01 dna N/A GO:0000786 ... P02281 39270644
    937775 9gd2:O (4.2) BS01 dna N/A GO:0000786 ... P84233 39270644
    937776 9gd2:O (4.2) BS02 dna N/A GO:0000786 ... P84233 39270644
    937777 9gd2:P (4.2) BS01 dna N/A GO:0000786 ... P62799 39270644
    937778 9gd2:P (4.2) BS02 dna N/A GO:0000786 ... P62799 39270644
    937779 9gd2:Q (4.2) BS01 peptide N/A GO:0000786 ... P02281 39270644
    937780 9gd2:R (4.2) BS01 peptide N/A GO:0000786 ... P06897 39270644
    937781 9gd2:W (4.2) BS01 dna N/A GO:0000123 ... P32657 39270644
    937782 9gd2:W (4.2) BS02 dna N/A GO:0000123 ... P32657 39270644
    937783 9gd2:W (4.2) BS03 peptide N/A GO:0000123 ... P32657 39270644
    937784 9gd2:W (4.2) BS04 ADP N/A GO:0000123 ... P32657 39270644
    937785 9gd2:W (4.2) BS05 BEF N/A GO:0000123 ... P32657 39270644
    937786 9gd3:A (3.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937787 9gd3:A (3.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937788 9gd3:B (3.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937789 9gd3:B (3.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937790 9gd3:C (3.0) BS01 dna N/A GO:0000786 ... P06897 39270644
    937791 9gd3:C (3.0) BS02 dna N/A GO:0000786 ... P06897 39270644
    937792 9gd3:C (3.0) BS03 peptide N/A GO:0000786 ... P06897 39270644
    937793 9gd3:D (3.0) BS01 dna N/A GO:0000786 ... P02281 39270644
    937794 9gd3:D (3.0) BS02 peptide N/A GO:0000786 ... P02281 39270644
    937795 9gd3:E (3.0) BS01 dna N/A GO:0000786 ... P84233 39270644
    937796 9gd3:E (3.0) BS02 dna N/A GO:0000786 ... P84233 39270644
    937797 9gd3:E (3.0) BS03 peptide N/A GO:0000786 ... P84233 39270644
    937798 9gd3:F (3.0) BS01 dna N/A GO:0000786 ... P62799 39270644
    937799 9gd3:F (3.0) BS02 dna N/A GO:0000786 ... P62799 39270644
    937800 9gd3:G (3.0) BS01 dna N/A GO:0000786 ... P06897 39270644

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).