SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4682 4683 4684 4685 4686 4687 4688 4689 4690 4691 4692 4693 4694 4695 4696 4697 4698 4699 4700 4701 4702 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    938201 9gjs:A (1.351) BS02 A1IMJ N/A N/A Q9NZ08 39691536
    938202 9gjs:A (1.351) BS03 A1IMJ N/A N/A Q9NZ08 39691536
    938203 9gk6:A (1.327) BS01 ZN N/A N/A Q9NZ08 39691536
    938204 9gk6:A (1.327) BS02 A1IMM N/A N/A Q9NZ08 39691536
    938205 9gke:A (1.367) BS01 ZN N/A N/A Q9NZ08 39691536
    938206 9gke:A (1.367) BS02 A1IML N/A N/A Q9NZ08 39691536
    938207 9gkg:A (2.21) BS01 LRX N/A N/A Q13432 N/A
    938208 9gkg:K (2.21) BS01 LRX N/A N/A Q13432 N/A
    938209 9gku:A (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938210 9gku:A (1.48) BS02 ZN N/A GO:0004407 ... G3JWV8 39489725
    938211 9gku:B (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938212 9gku:B (1.48) BS02 ZN N/A GO:0004407 ... G3JWV8 39489725
    938213 9gku:C (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938214 9gku:C (1.48) BS02 BGC N/A GO:0004407 ... G3JWV8 39489725
    938215 9gku:C (1.48) BS03 ZN N/A GO:0004407 ... G3JWV8 39489725
    938216 9gku:D (1.48) BS01 ZN N/A GO:0004407 ... G3JWV8 39489725
    938217 9gku:E (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938218 9gku:E (1.48) BS02 BGC N/A GO:0004407 ... G3JWV8 39489725
    938219 9gku:E (1.48) BS03 ZN N/A GO:0004407 ... G3JWV8 39489725
    938220 9gku:F (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938221 9gku:F (1.48) BS02 ZN N/A GO:0004407 ... G3JWV8 39489725
    938222 9gku:G (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938223 9gku:G (1.48) BS02 ZN N/A GO:0004407 ... G3JWV8 39489725
    938224 9gku:H (1.48) BS01 BGC N/A GO:0004407 ... G3JWV8 39489725
    938225 9gku:H (1.48) BS02 ZN N/A GO:0004407 ... G3JWV8 39489725
    938226 9gkv:A (1.9) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    938227 9gkv:B (1.9) BS01 SHH N/A GO:0004407 ... A0A395TF31 39489725
    938228 9gkv:B (1.9) BS02 ZN N/A GO:0004407 ... A0A395TF31 39489725
    938229 9gkw:A (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938230 9gkw:A (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938231 9gkw:B (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938232 9gkw:B (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938233 9gkw:C (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938234 9gkw:C (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938235 9gkw:D (2.1) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938236 9gkw:D (2.1) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938237 9gkx:A (1.75) BS01 SHH N/A GO:0004407 ... A0A067XIQ6 39489725
    938238 9gkx:A (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938239 9gkx:B (1.75) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938240 9gkx:B (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938241 9gkx:C (1.75) BS01 SHH N/A GO:0004407 ... A0A067XIQ6 39489725
    938242 9gkx:C (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938243 9gkx:D (1.75) BS01 OCA N/A GO:0004407 ... A0A067XIQ6 39489725
    938244 9gkx:D (1.75) BS02 ZN N/A GO:0004407 ... A0A067XIQ6 39489725
    938245 9gky:A (1.13) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    938246 9gky:B (1.13) BS01 ZN N/A GO:0004407 ... A0A395TF31 39489725
    938247 9gkz:A (2.72) BS01 ZN N/A GO:0004407 ... A0A1Y0KY79 39489725
    938248 9gkz:B (2.72) BS01 ZN N/A GO:0004407 ... A0A1Y0KY79 39489725
    938249 9gl0:A (2.7) BS01 ZN N/A GO:0016787 ... A0A2S6EWV0 39489725
    938250 9gl0:B (2.7) BS01 ZN N/A GO:0016787 ... A0A2S6EWV0 39489725
    938251 9gl0:C (2.7) BS01 ZN N/A GO:0016787 ... A0A2S6EWV0 39489725
    938252 9gl0:D (2.7) BS01 ZN N/A GO:0016787 ... A0A2S6EWV0 39489725
    938253 9gl1:A (2.4) BS01 ZN N/A GO:0004407 ... A0A0W0SGS1 39489725
    938254 9gl3:A (3.2) BS01 ATP N/A N/A G7CBF5 39880813
    938255 9gl3:A (3.2) BS02 ATP N/A N/A G7CBF5 39880813
    938256 9gl3:B (3.2) BS01 ATP N/A GO:0005524 ... G7CBF6 39880813
    938257 9gl3:B (3.2) BS02 ATP N/A GO:0005524 ... G7CBF6 39880813
    938258 9glb:C (2.1) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    938259 9gle:A (1.88) BS01 ZN N/A N/A O75164 N/A
    938260 9gle:B (1.88) BS01 ZN N/A N/A O75164 N/A
    938261 9glq:A (2.1) BS01 CO N/A N/A O15350 39695090
    938262 9glv:A (1.93) BS01 A1IMY N/A N/A P0DTC1 39577571
    938263 9glv:B (1.93) BS01 A1IMY N/A N/A P0DTC1 39577571
    938264 9gmk:A (3.5) BS01 dna N/A N/A Q71DI3 N/A
    938265 9gmk:A (3.5) BS02 dna N/A N/A Q71DI3 N/A
    938266 9gmk:B (3.5) BS01 dna N/A N/A P62805 N/A
    938267 9gmk:B (3.5) BS02 dna N/A N/A P62805 N/A
    938268 9gmk:C (3.5) BS01 dna N/A N/A Q6FI13 N/A
    938269 9gmk:C (3.5) BS02 dna N/A N/A Q6FI13 N/A
    938270 9gmk:D (3.5) BS01 dna N/A N/A P06899 N/A
    938271 9gmk:D (3.5) BS02 dna N/A N/A P06899 N/A
    938272 9gmk:E (3.5) BS01 dna N/A N/A Q71DI3 N/A
    938273 9gmk:E (3.5) BS02 dna N/A N/A Q71DI3 N/A
    938274 9gmk:F (3.5) BS01 dna N/A N/A P62805 N/A
    938275 9gmk:F (3.5) BS02 dna N/A N/A P62805 N/A
    938276 9gmk:G (3.5) BS01 dna N/A N/A Q6FI13 N/A
    938277 9gmk:G (3.5) BS02 dna N/A N/A Q6FI13 N/A
    938278 9gmk:H (3.5) BS01 dna N/A N/A P06899 N/A
    938279 9gmk:H (3.5) BS02 dna N/A N/A P06899 N/A
    938280 9gmo:0 (2.59) BS01 rna N/A GO:0003723 ... Q969S3 38746087
    938281 9gmo:D (2.59) BS01 rna N/A GO:0002181 ... P62917 38746087
    938282 9gmo:E (2.59) BS01 rna N/A GO:0002181 ... P39023 38746087
    938283 9gmo:F (2.59) BS01 rna N/A GO:0002181 ... P36578 38746087
    938284 9gmo:F (2.59) BS02 rna N/A GO:0002181 ... P36578 38746087
    938285 9gmo:G (2.59) BS01 rna N/A GO:0000027 ... P46777 38746087
    938286 9gmo:G (2.59) BS02 rna N/A GO:0000027 ... P46777 38746087
    938287 9gmo:G (2.59) BS03 GTP N/A GO:0000027 ... P46777 38746087
    938288 9gmo:H (2.59) BS01 rna N/A GO:0002181 ... Q02878 38746087
    938289 9gmo:I (2.59) BS01 rna N/A GO:0002181 ... P40429 38746087
    938290 9gmo:J (2.59) BS01 rna N/A GO:0002181 ... P18621 38746087
    938291 9gmo:J (2.59) BS02 rna N/A GO:0002181 ... P18621 38746087
    938292 9gmo:K (2.59) BS01 rna N/A GO:0002181 ... Q07020 38746087
    938293 9gmo:L (2.59) BS01 rna N/A GO:0002181 ... P84098 38746087
    938294 9gmo:M (2.59) BS01 rna N/A GO:0002181 ... Q02543 38746087
    938295 9gmo:M (2.59) BS02 rna N/A GO:0002181 ... Q02543 38746087
    938296 9gmo:N (2.59) BS01 rna N/A GO:0002181 ... P46778 38746087
    938297 9gmo:N (2.59) BS02 rna N/A GO:0002181 ... P46778 38746087
    938298 9gmo:O (2.59) BS01 rna N/A GO:0002181 ... P35268 38746087
    938299 9gmo:P (2.59) BS01 rna N/A GO:0000122 ... P62829 38746087
    938300 9gmo:Q (2.59) BS01 rna N/A GO:0000027 ... P83731 38746087
    938301 9gmo:R (2.59) BS01 rna N/A GO:0002181 ... P62750 38746087
    938302 9gmo:R (2.59) BS02 rna N/A GO:0002181 ... P62750 38746087
    938303 9gmo:S (2.59) BS01 rna N/A GO:0002181 ... P61254 38746087
    938304 9gmo:S (2.59) BS02 rna N/A GO:0002181 ... P61254 38746087
    938305 9gmo:T (2.59) BS01 rna N/A GO:0002181 ... P61353 38746087
    938306 9gmo:U (2.59) BS01 rna N/A GO:0002181 ... P46776 38746087
    938307 9gmo:V (2.59) BS01 rna N/A GO:0002181 ... P47914 38746087
    938308 9gmo:W (2.59) BS01 rna N/A GO:0002181 ... P62888 38746087
    938309 9gmo:X (2.59) BS01 rna N/A GO:0002181 ... P62899 38746087
    938310 9gmo:Y (2.59) BS01 rna N/A GO:0002181 ... P62910 38746087
    938311 9gmo:Z (2.59) BS01 rna N/A GO:0000049 ... P18077 38746087
    938312 9gmo:a (2.59) BS01 rna N/A GO:0002181 ... P49207 38746087
    938313 9gmo:a (2.59) BS02 ZN N/A GO:0002181 ... P49207 38746087
    938314 9gmo:b (2.59) BS01 rna N/A GO:0000463 ... P42766 38746087
    938315 9gmo:b (2.59) BS02 rna N/A GO:0000463 ... P42766 38746087
    938316 9gmo:c (2.59) BS01 rna N/A GO:0002181 ... Q9Y3U8 38746087
    938317 9gmo:d (2.59) BS01 rna N/A GO:0002181 ... P61927 38746087
    938318 9gmo:d (2.59) BS02 rna N/A GO:0002181 ... P61927 38746087
    938319 9gmo:d (2.59) BS03 ZN N/A GO:0002181 ... P61927 38746087
    938320 9gmo:e (2.59) BS01 rna N/A GO:0001501 ... P63173 38746087
    938321 9gmo:f (2.59) BS01 rna N/A GO:0002181 ... P62891 38746087
    938322 9gmo:f (2.59) BS02 rna N/A GO:0002181 ... P62891 38746087
    938323 9gmo:g (2.59) BS01 rna N/A GO:0002181 ... P62987 38746087
    938324 9gmo:g (2.59) BS02 ZN N/A GO:0002181 ... P62987 38746087
    938325 9gmo:h (2.59) BS01 rna N/A GO:0000054 ... P56537 38746087
    938326 9gmo:i (2.59) BS01 rna N/A GO:0002181 ... P83881 38746087
    938327 9gmo:i (2.59) BS02 ZN N/A GO:0002181 ... P83881 38746087
    938328 9gmo:j (2.59) BS01 rna N/A GO:0002181 ... P61513 38746087
    938329 9gmo:j (2.59) BS02 ZN N/A GO:0002181 ... P61513 38746087
    938330 9gmo:k (2.59) BS01 rna N/A GO:0002181 ... P46779 38746087
    938331 9gmo:l (2.59) BS01 rna N/A GO:0002181 ... P61313 38746087
    938332 9gmo:l (2.59) BS02 rna N/A GO:0002181 ... P61313 38746087
    938333 9gmo:m (2.59) BS01 rna N/A GO:0000463 ... P18124 38746087
    938334 9gmo:m (2.59) BS02 rna N/A GO:0000463 ... P18124 38746087
    938335 9gmo:n (2.59) BS01 rna N/A GO:0000470 ... P62424 38746087
    938336 9gmo:n (2.59) BS02 rna N/A GO:0000470 ... P62424 38746087
    938337 9gmo:o (2.59) BS01 rna N/A GO:0002181 ... P32969 38746087
    938338 9gmo:p (2.59) BS01 rna N/A GO:0000122 ... P27635 38746087
    938339 9gmo:p (2.59) BS02 rna N/A GO:0000122 ... P27635 38746087
    938340 9gmo:q (2.59) BS01 rna N/A GO:0000027 ... P62913 38746087
    938341 9gmo:q (2.59) BS02 rna N/A GO:0000027 ... P62913 38746087
    938342 9gmo:r (2.59) BS01 rna N/A GO:0001824 ... P26373 38746087
    938343 9gmo:r (2.59) BS02 rna N/A GO:0001824 ... P26373 38746087
    938344 9gmo:s (2.59) BS01 rna N/A GO:0002181 ... P50914 38746087
    938345 9gmq:A (2.19) BS01 MXU N/A N/A P0DTC1 39817813
    938346 9gmq:B (2.19) BS01 MXU N/A N/A P0DTC1 39817813
    938347 9gmr:A (2.8) BS01 dna N/A N/A Q71DI3 N/A
    938348 9gmr:A (2.8) BS02 dna N/A N/A Q71DI3 N/A
    938349 9gmr:B (2.8) BS01 dna N/A N/A P62805 N/A
    938350 9gmr:B (2.8) BS02 dna N/A N/A P62805 N/A
    938351 9gmr:C (2.8) BS01 dna N/A N/A Q6FI13 N/A
    938352 9gmr:C (2.8) BS02 dna N/A N/A Q6FI13 N/A
    938353 9gmr:D (2.8) BS01 dna N/A N/A P06899 N/A
    938354 9gmr:D (2.8) BS02 dna N/A N/A P06899 N/A
    938355 9gmr:E (2.8) BS01 dna N/A N/A Q71DI3 N/A
    938356 9gmr:E (2.8) BS02 dna N/A N/A Q71DI3 N/A
    938357 9gmr:F (2.8) BS01 dna N/A N/A P62805 N/A
    938358 9gmr:F (2.8) BS02 dna N/A N/A P62805 N/A
    938359 9gmr:G (2.8) BS01 dna N/A N/A Q6FI13 N/A
    938360 9gmr:G (2.8) BS02 dna N/A N/A Q6FI13 N/A
    938361 9gmr:H (2.8) BS01 dna N/A N/A P06899 N/A
    938362 9gmr:H (2.8) BS02 dna N/A N/A P06899 N/A
    938363 9gmr:K (2.8) BS01 dna N/A N/A Q9NRC8 N/A
    938364 9gmr:K (2.8) BS02 dna N/A N/A Q9NRC8 N/A
    938365 9gmr:K (2.8) BS03 A1IY0 N/A N/A Q9NRC8 N/A
    938366 9gmr:K (2.8) BS04 ZN N/A N/A Q9NRC8 N/A
    938367 9gmw:A (3.0) BS01 rna N/A N/A Q7Z7L1 39627193
    938368 9gmw:A (3.0) BS02 ZN N/A N/A Q7Z7L1 39627193
    938369 9gmw:A (3.0) BS03 MN N/A N/A Q7Z7L1 39627193
    938370 9gmw:B (3.0) BS01 rna N/A N/A Q7Z7L1 39627193
    938371 9gmw:B (3.0) BS02 ZN N/A N/A Q7Z7L1 39627193
    938372 9gmw:B (3.0) BS03 MN N/A N/A Q7Z7L1 39627193
    938373 9gmw:B (3.0) BS04 MN N/A N/A Q7Z7L1 39627193
    938374 9gmx:A (2.82) BS01 rna N/A N/A Q7Z7L1 39627193
    938375 9gmx:A (2.82) BS02 ZN N/A N/A Q7Z7L1 39627193
    938376 9gmx:A (2.82) BS03 MN N/A N/A Q7Z7L1 39627193
    938377 9gmx:B (2.82) BS01 ZN N/A N/A Q7Z7L1 39627193
    938378 9gmx:B (2.82) BS02 MN N/A N/A Q7Z7L1 39627193
    938379 9gn1:A (2.35) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    938380 9gn2:A (2.41) BS01 CYT N/A N/A Q9R5V5 39691463
    938381 9gn2:A (2.41) BS02 RIB N/A N/A Q9R5V5 39691463
    938382 9gn2:B (2.41) BS01 CYT N/A N/A Q9R5V5 39691463
    938383 9gn4:A (2.48) BS01 CTN N/A N/A Q9R5V5 39691463
    938384 9gn4:A (2.48) BS02 CTN N/A N/A Q9R5V5 39691463
    938385 9gn4:B (2.48) BS01 CTN N/A N/A Q9R5V5 39691463
    938386 9gn4:B (2.48) BS02 CTN N/A N/A Q9R5V5 39691463
    938387 9gn6:A (1.95) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    938388 9gn6:A (1.95) BS02 SHH N/A GO:0004407 ... A0A377Z5F6 39489725
    938389 9gn7:A (2.18) BS01 ZN N/A GO:0004407 ... A0A377Z5F6 39489725
    938390 9gn7:A (2.18) BS02 TSN N/A GO:0004407 ... A0A377Z5F6 39489725
    938391 9gnl:A (2.4) BS01 A8S N/A N/A F6HT94 N/A
    938392 9gnl:B (2.4) BS01 A8S N/A N/A F6HT94 N/A
    938393 9gnq:A (2.9) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    938394 9gnq:B (2.9) BS01 GDP N/A GO:0000226 ... P02554 N/A
    938395 9gnq:B (2.9) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    938396 9gnq:K (2.9) BS01 ADP N/A N/A P33176 N/A
    938397 9gny:A (1.8) BS01 CFF N/A GO:0004483 ... P0DTD1 N/A
    938398 9gny:A (1.8) BS02 SAM N/A GO:0004483 ... P0DTD1 N/A
    938399 9gny:B (1.8) BS01 ZN N/A GO:0003723 ... P0DTD1 N/A
    938400 9gny:B (1.8) BS02 ZN N/A GO:0003723 ... P0DTD1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).