SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    938401 9axu:f (1.94) BS02 rna N/A GO:0002181 ... O42706 39379376
    938402 9axu:g (1.94) BS01 rna N/A GO:0002181 ... Q09668 39379376
    938403 9axu:h (1.94) BS01 rna N/A GO:0002181 ... P0CT61 39379376
    938404 9axu:i (1.94) BS01 rna N/A GO:0002181 ... O74884 39379376
    938405 9axu:j (1.94) BS01 rna N/A GO:0002181 ... Q10330 39379376
    938406 9axu:j (1.94) BS02 rna N/A GO:0002181 ... Q10330 39379376
    938407 9axu:k (1.94) BS01 rna N/A GO:0002181 ... P78946 39379376
    938408 9axu:k (1.94) BS02 rna N/A GO:0002181 ... P78946 39379376
    938409 9axu:l (1.94) BS01 rna N/A GO:0002181 ... O14388 39379376
    938410 9axu:m (1.94) BS01 rna N/A GO:0002181 ... P57728 39379376
    938411 9axu:n (1.94) BS01 rna N/A GO:0002181 ... Q92366 39379376
    938412 9axu:o (1.94) BS01 rna N/A GO:0002181 ... P52808 39379376
    938413 9axu:p (1.94) BS01 rna N/A GO:0002181 ... Q9URX6 39379376
    938414 9axu:q (1.94) BS01 rna N/A GO:0002181 ... P79015 39379376
    938415 9axu:r (1.94) BS01 rna N/A GO:0002181 ... Q9USX4 39379376
    938416 9axu:s (1.94) BS01 rna N/A GO:0002181 ... Q9URT8 39379376
    938417 9axu:t (1.94) BS01 rna N/A GO:0000463 ... O74904 39379376
    938418 9axu:t (1.94) BS02 rna N/A GO:0000463 ... O74904 39379376
    938419 9axu:u (1.94) BS01 rna N/A GO:0002181 ... O94658 39379376
    938420 9axu:v (1.94) BS01 rna N/A GO:0000448 ... P05733 39379376
    938421 9axu:v (1.94) BS02 rna N/A GO:0000448 ... P05733 39379376
    938422 9axu:v (1.94) BS03 ZN N/A GO:0000448 ... P05733 39379376
    938423 9axu:w (1.94) BS01 rna N/A GO:0002181 ... Q9USR7 39379376
    938424 9axu:x (1.94) BS01 rna N/A GO:0002181 ... P05767 39379376
    938425 9axu:x (1.94) BS02 rna N/A GO:0002181 ... P05767 39379376
    938426 9axu:y (1.94) BS01 rna N/A GO:0002181 ... O14069 39379376
    938427 9axv:AD (2.4) BS01 rna N/A GO:0000028 ... Q9Y7L8 39379376
    938428 9axv:AE (2.4) BS01 rna N/A GO:0002181 ... O94438 39379376
    938429 9axv:AE (2.4) BS02 rna N/A GO:0002181 ... O94438 39379376
    938430 9axv:AF (2.4) BS01 rna N/A GO:0002181 ... O74892 39379376
    938431 9axv:AG (2.4) BS01 rna N/A GO:0002181 ... O60128 39379376
    938432 9axv:AH (2.4) BS01 rna N/A GO:0002181 ... Q9P4W9 39379376
    938433 9axv:AI (2.4) BS01 rna N/A GO:0002181 ... O14277 39379376
    938434 9axv:AJ (2.4) BS01 rna N/A GO:0002181 ... Q9C0Z7 39379376
    938435 9axv:AK (2.4) BS01 rna N/A GO:0002181 ... Q10101 39379376
    938436 9axv:AL (2.4) BS01 rna N/A GO:0002181 ... Q9P7B2 39379376
    938437 9axv:AM (2.4) BS01 rna N/A GO:0002181 ... O59675 39379376
    938438 9axv:AN (2.4) BS01 rna N/A GO:0002181 ... O13614 39379376
    938439 9axv:AO (2.4) BS01 rna N/A GO:0002181 ... P0CT73 39379376
    938440 9axv:AP (2.4) BS01 rna N/A GO:0002181 ... O14062 39379376
    938441 9axv:AQ (2.4) BS01 rna N/A GO:0000462 ... P28189 39379376
    938442 9axv:AR (2.4) BS01 rna N/A GO:0000028 ... P0CT57 39379376
    938443 9axv:AS (2.4) BS01 rna N/A GO:0002181 ... Q9UTQ6 39379376
    938444 9axv:AT (2.4) BS01 rna N/A GO:0000462 ... P0CT64 39379376
    938445 9axv:AU (2.4) BS01 rna N/A GO:0002182 ... O42984 39379376
    938446 9axv:AV (2.4) BS01 rna N/A GO:0002181 ... P0CT67 39379376
    938447 9axv:AW (2.4) BS01 rna N/A GO:0002181 ... P58234 39379376
    938448 9axv:Aa (2.4) BS01 rna N/A GO:0002181 ... O74893 39379376
    938449 9axv:Ac (2.4) BS01 rna N/A GO:0002181 ... P0CT58 39379376
    938450 9axv:Ad (2.4) BS01 rna N/A GO:0002181 ... P0CT75 39379376
    938451 9axv:Ae (2.4) BS01 rna N/A GO:0002181 ... O13784 39379376
    938452 9axv:Af (2.4) BS01 rna N/A GO:0002181 ... P79009 39379376
    938453 9axv:Ag (2.4) BS01 rna N/A GO:0002181 ... Q9UTG4 39379376
    938454 9axv:Ag (2.4) BS02 ZN N/A GO:0002181 ... Q9UTG4 39379376
    938455 9axv:Ah (2.4) BS01 rna N/A GO:0002181 ... O74330 39379376
    938456 9axv:Ah (2.4) BS02 ZN N/A GO:0002181 ... O74330 39379376
    938457 9axv:Ai (2.4) BS01 rna N/A GO:0000028 ... P0CT79 39379376
    938458 9axv:Aj (2.4) BS01 rna N/A GO:0002181 ... O74329 39379376
    938459 9axv:Ak (2.4) BS01 rna N/A GO:0002181 ... P0CT63 39379376
    938460 9axv:Am (2.4) BS01 rna N/A GO:0003735 ... Q10281 39379376
    938461 9axv:B0 (2.4) BS01 rna N/A GO:0002181 ... Q9UTI8 39379376
    938462 9axv:B0 (2.4) BS02 rna N/A GO:0002181 ... Q9UTI8 39379376
    938463 9axv:B0 (2.4) BS03 ZN N/A GO:0002181 ... Q9UTI8 39379376
    938464 9axv:B1 (2.4) BS01 rna N/A GO:0002181 ... Q9HGL8 39379376
    938465 9axv:B1 (2.4) BS02 ZN N/A GO:0002181 ... Q9HGL8 39379376
    938466 9axv:BN (2.4) BS01 rna N/A GO:0002181 ... P0CT72 39379376
    938467 9axv:BO (2.4) BS01 rna N/A GO:0002181 ... P40372 39379376
    938468 9axv:BP (2.4) BS01 rna N/A GO:0002181 ... P35679 39379376
    938469 9axv:BP (2.4) BS02 rna N/A GO:0002181 ... P35679 39379376
    938470 9axv:BQ (2.4) BS01 rna N/A GO:0000027 ... O74306 39379376
    938471 9axv:BQ (2.4) BS02 rna N/A GO:0000027 ... O74306 39379376
    938472 9axv:BR (2.4) BS01 rna N/A GO:0002181 ... P79071 39379376
    938473 9axv:BS (2.4) BS01 rna N/A GO:0000171 ... O60143 39379376
    938474 9axv:BS (2.4) BS02 rna N/A GO:0000171 ... O60143 39379376
    938475 9axv:BT (2.4) BS01 rna N/A GO:0000470 ... O13672 39379376
    938476 9axv:BT (2.4) BS02 rna N/A GO:0000470 ... O13672 39379376
    938477 9axv:BU (2.4) BS01 rna N/A GO:0002181 ... O74905 39379376
    938478 9axv:BV (2.4) BS01 rna N/A GO:0002181 ... Q09127 39379376
    938479 9axv:BV (2.4) BS02 rna N/A GO:0002181 ... Q09127 39379376
    938480 9axv:BV (2.4) BS03 rna N/A GO:0002181 ... Q09127 39379376
    938481 9axv:BW (2.4) BS01 rna N/A GO:0002181 ... P0CT77 39379376
    938482 9axv:BW (2.4) BS02 rna N/A GO:0002181 ... P0CT77 39379376
    938483 9axv:BX (2.4) BS01 rna N/A GO:0002181 ... O74175 39379376
    938484 9axv:BX (2.4) BS02 rna N/A GO:0002181 ... O74175 39379376
    938485 9axv:BY (2.4) BS01 rna N/A GO:0002181 ... O94238 39379376
    938486 9axv:BZ (2.4) BS01 rna N/A GO:0002181 ... Q9US22 39379376
    938487 9axv:BZ (2.4) BS02 rna N/A GO:0002181 ... Q9US22 39379376
    938488 9axv:Ba (2.4) BS01 rna N/A GO:0002181 ... O42848 39379376
    938489 9axv:Bb (2.4) BS01 rna N/A GO:0002181 ... O14339 39379376
    938490 9axv:Bb (2.4) BS02 rna N/A GO:0002181 ... O14339 39379376
    938491 9axv:Bc (2.4) BS01 rna N/A GO:0002181 ... Q8TFH1 39379376
    938492 9axv:Bd (2.4) BS01 rna N/A GO:0002181 ... O42699 39379376
    938493 9axv:Be (2.4) BS01 rna N/A GO:0002181 ... P0CT68 39379376
    938494 9axv:Be (2.4) BS02 rna N/A GO:0002181 ... P0CT68 39379376
    938495 9axv:Bf (2.4) BS01 rna N/A GO:0002181 ... O42706 39379376
    938496 9axv:Bf (2.4) BS02 rna N/A GO:0002181 ... O42706 39379376
    938497 9axv:Bg (2.4) BS01 rna N/A GO:0002181 ... Q09668 39379376
    938498 9axv:Bh (2.4) BS01 rna N/A GO:0002181 ... P0CT61 39379376
    938499 9axv:Bi (2.4) BS01 rna N/A GO:0002181 ... O74884 39379376
    938500 9axv:Bj (2.4) BS01 rna N/A GO:0002181 ... Q10330 39379376
    938501 9axv:Bj (2.4) BS02 rna N/A GO:0002181 ... Q10330 39379376
    938502 9axv:Bk (2.4) BS01 rna N/A GO:0002181 ... P78946 39379376
    938503 9axv:Bk (2.4) BS02 rna N/A GO:0002181 ... P78946 39379376
    938504 9axv:Bl (2.4) BS01 rna N/A GO:0002181 ... O14388 39379376
    938505 9axv:Bm (2.4) BS01 rna N/A GO:0002181 ... P57728 39379376
    938506 9axv:Bn (2.4) BS01 rna N/A GO:0002181 ... Q92366 39379376
    938507 9axv:Bo (2.4) BS01 rna N/A GO:0002181 ... P52808 39379376
    938508 9axv:Bp (2.4) BS01 rna N/A GO:0002181 ... Q9URX6 39379376
    938509 9axv:Bq (2.4) BS01 rna N/A GO:0002181 ... P79015 39379376
    938510 9axv:Br (2.4) BS01 rna N/A GO:0002181 ... Q9USX4 39379376
    938511 9axv:Bs (2.4) BS01 rna N/A GO:0002181 ... Q9URT8 39379376
    938512 9axv:Bt (2.4) BS01 rna N/A GO:0000463 ... O74904 39379376
    938513 9axv:Bt (2.4) BS02 rna N/A GO:0000463 ... O74904 39379376
    938514 9axv:Bu (2.4) BS01 rna N/A GO:0002181 ... O94658 39379376
    938515 9axv:Bv (2.4) BS01 rna N/A GO:0000448 ... P05733 39379376
    938516 9axv:Bv (2.4) BS02 rna N/A GO:0000448 ... P05733 39379376
    938517 9axv:Bv (2.4) BS03 ZN N/A GO:0000448 ... P05733 39379376
    938518 9axv:Bw (2.4) BS01 rna N/A GO:0002181 ... Q9USR7 39379376
    938519 9axv:Bx (2.4) BS01 rna N/A GO:0002181 ... P05767 39379376
    938520 9axv:Bx (2.4) BS02 rna N/A GO:0002181 ... P05767 39379376
    938521 9axv:By (2.4) BS01 rna N/A GO:0002181 ... O14069 39379376
    938522 9axx:A (2.07) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    938523 9axx:A (2.07) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    938524 9axx:A (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    938525 9axx:B (2.07) BS01 ANP 2.7.11.1 GO:0004672 ... P15056 38588399
    938526 9axx:C (2.07) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    938527 9axx:C (2.07) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    938528 9axx:C (2.07) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    938529 9axy:A (3.6) BS01 ANP 2.7.11.1 GO:0004672 ... P15056 38588399
    938530 9axy:A (3.6) BS02 MG 2.7.11.1 GO:0004672 ... P15056 38588399
    938531 9axy:B (3.6) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    938532 9axy:B (3.6) BS02 ANP 2.7.12.2 GO:0000165 ... Q02750 38588399
    938533 9axy:B (3.6) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    938534 9axz:A (3.3) BS01 A1AHG N/A GO:0008017 ... P10636 N/A
    938535 9axz:B (3.3) BS01 A1AHG N/A GO:0008017 ... P10636 N/A
    938536 9axz:C (3.3) BS01 A1AHG N/A GO:0008017 ... P10636 N/A
    938537 9axz:D (3.3) BS01 A1AHG N/A GO:0008017 ... P10636 N/A
    938538 9ay0:A (3.24) BS01 GDS N/A GO:0000329 ... P39109 N/A
    938539 9ay7:A (2.41) BS01 ANP 2.7.11.1 GO:0004672 ... P04049 38588399
    938540 9ay7:A (2.41) BS02 MG 2.7.11.1 GO:0004672 ... P04049 38588399
    938541 9ay7:B (2.41) BS01 A1AHE 2.7.12.2 GO:0000165 ... Q02750 38588399
    938542 9ay7:B (2.41) BS02 ANP 2.7.12.2 GO:0000165 ... Q02750 38588399
    938543 9ay7:B (2.41) BS03 MG 2.7.12.2 GO:0000165 ... Q02750 38588399
    938544 9ay8:A (2.0) BS01 ZN N/A N/A P0DTR5 N/A
    938545 9ay8:A (2.0) BS02 CO N/A N/A P0DTR5 N/A
    938546 9ay8:A (2.0) BS03 MN N/A N/A P0DTR5 N/A
    938547 9ay8:B (2.0) BS01 ZN N/A N/A P0DTR5 N/A
    938548 9ay8:B (2.0) BS02 CO N/A N/A P0DTR5 N/A
    938549 9ay8:B (2.0) BS03 MN N/A N/A P0DTR5 N/A
    938550 9ay8:C (2.0) BS01 ZN N/A N/A P0DTR5 N/A
    938551 9ay8:C (2.0) BS02 CO N/A N/A P0DTR5 N/A
    938552 9ay8:C (2.0) BS03 MN N/A N/A P0DTR5 N/A
    938553 9ay8:D (2.0) BS01 ZN N/A N/A P0DTR5 N/A
    938554 9ay8:D (2.0) BS02 CO N/A N/A P0DTR5 N/A
    938555 9ay8:D (2.0) BS03 MN N/A N/A P0DTR5 N/A
    938556 9ay8:E (2.0) BS01 ZN N/A N/A P0DTR5 N/A
    938557 9ay8:E (2.0) BS02 CO N/A N/A P0DTR5 N/A
    938558 9ay8:E (2.0) BS03 MN N/A N/A P0DTR5 N/A
    938559 9ay9:A (2.22) BS01 A1AHM N/A GO:0016274 ... Q6P2P2 N/A
    938560 9ay9:B (2.22) BS01 A1AHM N/A GO:0016274 ... Q6P2P2 N/A
    938561 9ay9:C (2.22) BS01 A1AHM N/A GO:0016274 ... Q6P2P2 N/A
    938562 9ay9:D (2.22) BS01 A1AHM N/A GO:0016274 ... Q6P2P2 N/A
    938563 9aya:B (2.59) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    938564 9aya:B (2.59) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    938565 9aya:B (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    938566 9aya:D (2.59) BS01 A1AHE 2.7.12.2 GO:0004672 ... Q02750 38588399
    938567 9aya:D (2.59) BS02 ANP 2.7.12.2 GO:0004672 ... Q02750 38588399
    938568 9aya:D (2.59) BS03 MG 2.7.12.2 GO:0004672 ... Q02750 38588399
    938569 9aye:A (1.9) BS01 A1AHL N/A GO:0000266 ... Q9Y3D6 40328741
    938570 9ayf:Q (3.6) BS01 TCR ? GO:0004930 ... P41180 38632411
    938571 9ayf:Q (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    938572 9ayf:Q (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    938573 9ayf:Q (3.6) BS04 CA ? GO:0004930 ... P41180 38632411
    938574 9ayf:Q (3.6) BS05 9IG ? GO:0004930 ... P41180 38632411
    938575 9ayf:Q (3.6) BS06 AV0 ? GO:0004930 ... P41180 38632411
    938576 9ayf:R (3.6) BS01 TCR ? GO:0004930 ... P41180 38632411
    938577 9ayf:R (3.6) BS02 CA ? GO:0004930 ... P41180 38632411
    938578 9ayf:R (3.6) BS03 CA ? GO:0004930 ... P41180 38632411
    938579 9ayf:R (3.6) BS04 AV0 ? GO:0004930 ... P41180 38632411
    938580 9ayf:R (3.6) BS05 9IG ? GO:0004930 ... P41180 38632411
    938581 9ayg:A (3.0) BS01 CA ? GO:0005216 ... O95180 38605177
    938582 9ayg:A (3.0) BS02 LPE ? GO:0005216 ... O95180 38605177
    938583 9ayg:A (3.0) BS03 Y01 ? GO:0005216 ... O95180 38605177
    938584 9ayg:A (3.0) BS04 JL3 ? GO:0005216 ... O95180 38605177
    938585 9ayg:A (3.0) BS05 Y01 ? GO:0005216 ... O95180 38605177
    938586 9ayg:A (3.0) BS06 JL3 ? GO:0005216 ... O95180 38605177
    938587 9ayg:A (3.0) BS07 JL3 ? GO:0005216 ... O95180 38605177
    938588 9ayg:A (3.0) BS08 JL3 ? GO:0005216 ... O95180 38605177
    938589 9ayg:A (3.0) BS09 Y01 ? GO:0005216 ... O95180 38605177
    938590 9ayg:A (3.0) BS10 Y01 ? GO:0005216 ... O95180 38605177
    938591 9ayh:A (3.1) BS01 A1AHH ? GO:0005216 ... O95180 38605177
    938592 9ayh:A (3.1) BS02 CA ? GO:0005216 ... O95180 38605177
    938593 9ayh:A (3.1) BS03 LPE ? GO:0005216 ... O95180 38605177
    938594 9ayh:A (3.1) BS04 Y01 ? GO:0005216 ... O95180 38605177
    938595 9ayh:A (3.1) BS05 JL3 ? GO:0005216 ... O95180 38605177
    938596 9ayh:A (3.1) BS06 Y01 ? GO:0005216 ... O95180 38605177
    938597 9ayh:A (3.1) BS07 JL3 ? GO:0005216 ... O95180 38605177
    938598 9ayh:A (3.1) BS08 JL3 ? GO:0005216 ... O95180 38605177
    938599 9ayh:A (3.1) BS09 Y01 ? GO:0005216 ... O95180 38605177
    938600 9ayh:A (3.1) BS10 Y01 ? GO:0005216 ... O95180 38605177

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).