SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    938801 9azc:Lm (2.19) BS01 rna N/A GO:0003735 ... P62987 N/A
    938802 9azc:Lm (2.19) BS02 ZN N/A GO:0003735 ... P62987 N/A
    938803 9azc:Lo (2.19) BS01 rna N/A GO:0002181 ... P83881 N/A
    938804 9azc:Lo (2.19) BS02 rna N/A GO:0002181 ... P83881 N/A
    938805 9azc:Lo (2.19) BS03 ZN N/A GO:0002181 ... P83881 N/A
    938806 9azc:Lp (2.19) BS01 rna N/A GO:0002181 ... P61513 N/A
    938807 9azc:Lp (2.19) BS02 ZN N/A GO:0002181 ... P61513 N/A
    938808 9azc:Lr (2.19) BS01 rna N/A GO:0002181 ... P46779 N/A
    938809 9azc:Ls (2.19) BS01 rna N/A N/A P05388 N/A
    938810 9azc:Lt (2.19) BS01 rna N/A GO:0003735 ... P30050 N/A
    938811 9azc:SA (2.19) BS01 rna N/A GO:0003735 ... P08865 N/A
    938812 9azc:SB (2.19) BS01 rna N/A GO:0003735 ... P61247 N/A
    938813 9azc:SC (2.19) BS01 rna N/A GO:0003723 ... P15880 N/A
    938814 9azc:SD (2.19) BS01 rna N/A GO:0001228 ... P23396 N/A
    938815 9azc:SE (2.19) BS01 rna N/A GO:0002181 ... P62701 N/A
    938816 9azc:SF (2.19) BS01 rna N/A GO:0002181 ... P46782 N/A
    938817 9azc:SG (2.19) BS01 rna N/A GO:0002181 ... P62753 N/A
    938818 9azc:SH (2.19) BS01 rna N/A GO:0002181 ... P62081 N/A
    938819 9azc:SI (2.19) BS01 rna N/A GO:0002181 ... P62241 N/A
    938820 9azc:SI (2.19) BS02 rna N/A GO:0002181 ... P62241 N/A
    938821 9azc:SJ (2.19) BS01 rna N/A GO:0002181 ... P46781 N/A
    938822 9azc:SK (2.19) BS01 rna N/A N/A P46783 N/A
    938823 9azc:SL (2.19) BS01 rna N/A GO:0002181 ... P62280 N/A
    938824 9azc:SM (2.19) BS01 rna N/A GO:0002181 ... P25398 N/A
    938825 9azc:SN (2.19) BS01 rna N/A GO:0000462 ... P62277 N/A
    938826 9azc:SN (2.19) BS02 rna N/A GO:0000462 ... P62277 N/A
    938827 9azc:SO (2.19) BS01 rna N/A GO:0000028 ... P62263 N/A
    938828 9azc:SP (2.19) BS01 rna N/A GO:0003723 ... P62841 N/A
    938829 9azc:SQ (2.19) BS01 rna N/A GO:0000462 ... P62249 N/A
    938830 9azc:SR (2.19) BS01 rna N/A GO:0002181 ... P08708 N/A
    938831 9azc:SS (2.19) BS01 rna N/A GO:0002181 ... P62269 N/A
    938832 9azc:ST (2.19) BS01 rna N/A GO:0000028 ... P39019 N/A
    938833 9azc:SU (2.19) BS01 rna N/A GO:0003723 ... P60866 N/A
    938834 9azc:SW (2.19) BS01 rna N/A GO:0002181 ... P62244 N/A
    938835 9azc:SX (2.19) BS01 rna N/A GO:0002181 ... P62266 N/A
    938836 9azc:SY (2.19) BS01 rna N/A GO:0002181 ... P62847 N/A
    938837 9azc:SZ (2.19) BS01 rna N/A N/A P62851 N/A
    938838 9azc:Sa (2.19) BS01 rna N/A GO:0003735 ... P62854 N/A
    938839 9azc:Sa (2.19) BS02 ZN N/A GO:0003735 ... P62854 N/A
    938840 9azc:Sb (2.19) BS01 rna N/A GO:0002181 ... P42677 N/A
    938841 9azc:Sc (2.19) BS01 rna N/A GO:0000028 ... P62857 N/A
    938842 9azc:Sd (2.19) BS01 rna N/A GO:0002181 ... P62273 N/A
    938843 9azc:Se (2.19) BS01 rna N/A GO:0003735 ... P62861 N/A
    938844 9azc:Sf (2.19) BS01 rna N/A GO:0003735 ... P62979 N/A
    938845 9azc:Sg (2.19) BS01 rna N/A GO:0001891 ... P63244 N/A
    938846 9azj:A (3.32) BS01 peptide N/A N/A Q9Y6K9 N/A
    938847 9azj:B (3.32) BS01 peptide N/A N/A Q9Y6K9 N/A
    938848 9azj:F (3.32) BS01 peptide N/A N/A P0CG47 N/A
    938849 9azj:Z (3.32) BS01 peptide N/A N/A P0CG47 N/A
    938850 9azk:A (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938851 9azk:A (2.1) BS02 A1AHR N/A GO:0004252 ... P00747 39118493
    938852 9azk:B (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938853 9azk:C (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938854 9azk:D (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938855 9azk:E (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938856 9azk:F (2.1) BS01 A1AHR N/A GO:0004252 ... P00747 39118493
    938857 9azl:A (2.99) BS01 ADP N/A GO:0005515 ... A3DCU1 39428489
    938858 9azl:B (2.99) BS01 ADP N/A GO:0005515 ... A3DCU1 39428489
    938859 9azl:B (2.99) BS02 MG N/A GO:0005515 ... A3DCU1 39428489
    938860 9azm:SD (2.68) BS01 rna N/A GO:0001228 ... P23396 N/A
    938861 9azm:SF (2.68) BS01 rna N/A GO:0002181 ... P46782 N/A
    938862 9azm:SK (2.68) BS01 rna N/A N/A P46783 N/A
    938863 9azm:SM (2.68) BS01 rna N/A GO:0002181 ... P25398 N/A
    938864 9azm:SP (2.68) BS01 rna N/A GO:0003723 ... P62841 N/A
    938865 9azm:SQ (2.68) BS01 rna N/A GO:0000462 ... P62249 N/A
    938866 9azm:SS (2.68) BS01 rna N/A GO:0002181 ... P62269 N/A
    938867 9azm:ST (2.68) BS01 rna N/A GO:0000028 ... P39019 N/A
    938868 9azm:SU (2.68) BS01 rna N/A GO:0003723 ... P60866 N/A
    938869 9azm:SZ (2.68) BS01 rna N/A N/A P62851 N/A
    938870 9azm:Sc (2.68) BS01 rna N/A GO:0000028 ... P62857 N/A
    938871 9azm:Sd (2.68) BS01 rna N/A GO:0002181 ... P62273 N/A
    938872 9azm:Sf (2.68) BS01 rna N/A GO:0003735 ... P62979 N/A
    938873 9azm:Sg (2.68) BS01 rna N/A GO:0001891 ... P63244 N/A
    938874 9azo:A (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938875 9azo:B (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938876 9azo:C (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938877 9azo:D (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938878 9azo:E (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938879 9azo:F (2.34) BS01 NAP N/A N/A Q93PS4 39222681
    938880 9azp:A (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938881 9azp:B (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938882 9azp:C (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938883 9azp:D (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938884 9azp:E (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938885 9azp:F (3.79) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938886 9azp:I (3.79) BS01 ATP 3.6.4.- GO:0000287 ... P68135 38843827
    938887 9azq:A (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938888 9azq:B (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938889 9azq:C (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938890 9azq:C (3.82) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    938891 9azq:D (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938892 9azq:E (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938893 9azq:E (3.82) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    938894 9azq:F (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938895 9azq:I (3.82) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    938896 9azq:I (3.82) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    938897 9azu:A (1.73) BS01 KJK N/A GO:0008800 ... P24735 40503958
    938898 9azw:A (1.55) BS01 KJK N/A GO:0008800 ... P24735 40503958
    938899 9azx:A (1.395) BS01 A1AH3 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38646883
    938900 9azx:B (1.395) BS01 A1AH3 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38646883
    938901 9azx:C (1.395) BS01 A1AH3 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38646883
    938902 9b00:10 (2.8) BS01 rna N/A GO:0003735 ... P60493 39019034
    938903 9b00:10 (2.8) BS02 rna N/A GO:0003735 ... P60493 39019034
    938904 9b00:10 (2.8) BS03 MG N/A GO:0003735 ... P60493 39019034
    938905 9b00:10 (2.8) BS04 MG N/A GO:0003735 ... P60493 39019034
    938906 9b00:11 (2.8) BS01 rna N/A GO:0003735 ... P60494 39019034
    938907 9b00:11 (2.8) BS02 rna N/A GO:0003735 ... P60494 39019034
    938908 9b00:11 (2.8) BS03 MG N/A GO:0003735 ... P60494 39019034
    938909 9b00:11 (2.8) BS04 MG N/A GO:0003735 ... P60494 39019034
    938910 9b00:12 (2.8) BS01 rna N/A GO:0003735 ... Q5SHP6 39019034
    938911 9b00:13 (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ6 39019034
    938912 9b00:13 (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ6 39019034
    938913 9b00:13 (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ6 39019034
    938914 9b00:13 (2.8) BS04 MG N/A GO:0003735 ... Q5SHQ6 39019034
    938915 9b00:14 (2.8) BS01 rna N/A GO:0003735 ... Q5SJE1 39019034
    938916 9b00:14 (2.8) BS02 ZN N/A GO:0003735 ... Q5SJE1 39019034
    938917 9b00:15 (2.8) BS01 rna N/A GO:0003735 ... P80339 39019034
    938918 9b00:15 (2.8) BS02 MG N/A GO:0003735 ... P80339 39019034
    938919 9b00:15 (2.8) BS03 ZN N/A GO:0003735 ... P80339 39019034
    938920 9b00:16 (2.8) BS01 rna N/A GO:0003735 ... P35871 39019034
    938921 9b00:16 (2.8) BS02 MG N/A GO:0003735 ... P35871 39019034
    938922 9b00:16 (2.8) BS03 ZN N/A GO:0003735 ... P35871 39019034
    938923 9b00:17 (2.8) BS01 rna N/A GO:0003735 ... P80340 39019034
    938924 9b00:17 (2.8) BS02 MG N/A GO:0003735 ... P80340 39019034
    938925 9b00:17 (2.8) BS03 MG N/A GO:0003735 ... P80340 39019034
    938926 9b00:18 (2.8) BS01 rna N/A GO:0003735 ... Q5SKU1 39019034
    938927 9b00:18 (2.8) BS02 MG N/A GO:0003735 ... Q5SKU1 39019034
    938928 9b00:18 (2.8) BS03 MG N/A GO:0003735 ... Q5SKU1 39019034
    938929 9b00:18 (2.8) BS04 MG N/A GO:0003735 ... Q5SKU1 39019034
    938930 9b00:19 (2.8) BS01 rna N/A GO:0003735 ... Q5SHR2 39019034
    938931 9b00:19 (2.8) BS02 ZN N/A GO:0003735 ... Q5SHR2 39019034
    938932 9b00:1D (2.8) BS01 rna N/A GO:0002181 ... P60405 39019034
    938933 9b00:1D (2.8) BS02 rna N/A GO:0002181 ... P60405 39019034
    938934 9b00:1D (2.8) BS03 MG N/A GO:0002181 ... P60405 39019034
    938935 9b00:1D (2.8) BS04 MG N/A GO:0002181 ... P60405 39019034
    938936 9b00:1D (2.8) BS05 MG N/A GO:0002181 ... P60405 39019034
    938937 9b00:1D (2.8) BS06 MG N/A GO:0002181 ... P60405 39019034
    938938 9b00:1D (2.8) BS07 MG N/A GO:0002181 ... P60405 39019034
    938939 9b00:1D (2.8) BS08 MG N/A GO:0002181 ... P60405 39019034
    938940 9b00:1D (2.8) BS09 MG N/A GO:0002181 ... P60405 39019034
    938941 9b00:1D (2.8) BS10 MG N/A GO:0002181 ... P60405 39019034
    938942 9b00:1D (2.8) BS11 MG N/A GO:0002181 ... P60405 39019034
    938943 9b00:1D (2.8) BS12 MG N/A GO:0002181 ... P60405 39019034
    938944 9b00:1D (2.8) BS13 MG N/A GO:0002181 ... P60405 39019034
    938945 9b00:1E (2.8) BS01 rna N/A GO:0003735 ... Q5SHN8 39019034
    938946 9b00:1E (2.8) BS02 MG N/A GO:0003735 ... Q5SHN8 39019034
    938947 9b00:1E (2.8) BS03 MG N/A GO:0003735 ... Q5SHN8 39019034
    938948 9b00:1E (2.8) BS04 MG N/A GO:0003735 ... Q5SHN8 39019034
    938949 9b00:1E (2.8) BS05 MG N/A GO:0003735 ... Q5SHN8 39019034
    938950 9b00:1F (2.8) BS01 rna N/A GO:0003735 ... Q5SHN9 39019034
    938951 9b00:1F (2.8) BS02 MG N/A GO:0003735 ... Q5SHN9 39019034
    938952 9b00:1F (2.8) BS03 MG N/A GO:0003735 ... Q5SHN9 39019034
    938953 9b00:1F (2.8) BS04 MG N/A GO:0003735 ... Q5SHN9 39019034
    938954 9b00:1F (2.8) BS05 MG N/A GO:0003735 ... Q5SHN9 39019034
    938955 9b00:1F (2.8) BS06 MG N/A GO:0003735 ... Q5SHN9 39019034
    938956 9b00:1F (2.8) BS07 MG N/A GO:0003735 ... Q5SHN9 39019034
    938957 9b00:1F (2.8) BS08 MG N/A GO:0003735 ... Q5SHN9 39019034
    938958 9b00:1F (2.8) BS09 MG N/A GO:0003735 ... Q5SHN9 39019034
    938959 9b00:1F (2.8) BS10 MG N/A GO:0003735 ... Q5SHN9 39019034
    938960 9b00:1G (2.8) BS01 rna N/A GO:0000049 ... Q5SHQ0 39019034
    938961 9b00:1G (2.8) BS02 rna N/A GO:0000049 ... Q5SHQ0 39019034
    938962 9b00:1G (2.8) BS03 rna N/A GO:0000049 ... Q5SHQ0 39019034
    938963 9b00:1G (2.8) BS04 MG N/A GO:0000049 ... Q5SHQ0 39019034
    938964 9b00:1H (2.8) BS01 rna N/A GO:0002181 ... P0DOY8 39019034
    938965 9b00:1I (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ1 39019034
    938966 9b00:1N (2.8) BS01 rna N/A GO:0003729 ... P60488 39019034
    938967 9b00:1N (2.8) BS02 MG N/A GO:0003729 ... P60488 39019034
    938968 9b00:1N (2.8) BS03 MG N/A GO:0003729 ... P60488 39019034
    938969 9b00:1N (2.8) BS04 MG N/A GO:0003729 ... P60488 39019034
    938970 9b00:1O (2.8) BS01 rna N/A GO:0003735 ... Q5SHP8 39019034
    938971 9b00:1O (2.8) BS02 rna N/A GO:0003735 ... Q5SHP8 39019034
    938972 9b00:1P (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ7 39019034
    938973 9b00:1P (2.8) BS02 MG N/A GO:0003735 ... Q5SHQ7 39019034
    938974 9b00:1P (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ7 39019034
    938975 9b00:1P (2.8) BS04 MG N/A GO:0003735 ... Q5SHQ7 39019034
    938976 9b00:1P (2.8) BS05 MG N/A GO:0003735 ... Q5SHQ7 39019034
    938977 9b00:1P (2.8) BS06 MG N/A GO:0003735 ... Q5SHQ7 39019034
    938978 9b00:1Q (2.8) BS01 rna N/A GO:0003735 ... P60489 39019034
    938979 9b00:1Q (2.8) BS02 rna N/A GO:0003735 ... P60489 39019034
    938980 9b00:1Q (2.8) BS03 rna N/A GO:0003735 ... P60489 39019034
    938981 9b00:1Q (2.8) BS04 MG N/A GO:0003735 ... P60489 39019034
    938982 9b00:1Q (2.8) BS05 MG N/A GO:0003735 ... P60489 39019034
    938983 9b00:1Q (2.8) BS06 MG N/A GO:0003735 ... P60489 39019034
    938984 9b00:1R (2.8) BS01 rna N/A GO:0003735 ... Q9Z9H5 39019034
    938985 9b00:1R (2.8) BS02 MG N/A GO:0003735 ... Q9Z9H5 39019034
    938986 9b00:1R (2.8) BS03 MG N/A GO:0003735 ... Q9Z9H5 39019034
    938987 9b00:1S (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ4 39019034
    938988 9b00:1S (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ4 39019034
    938989 9b00:1S (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ4 39019034
    938990 9b00:1S (2.8) BS04 MG N/A GO:0003735 ... Q5SHQ4 39019034
    938991 9b00:1T (2.8) BS01 rna N/A GO:0003735 ... P60490 39019034
    938992 9b00:1T (2.8) BS02 rna N/A GO:0003735 ... P60490 39019034
    938993 9b00:1U (2.8) BS01 rna N/A GO:0000027 ... P60491 39019034
    938994 9b00:1U (2.8) BS02 MG N/A GO:0000027 ... P60491 39019034
    938995 9b00:1U (2.8) BS03 MG N/A GO:0000027 ... P60491 39019034
    938996 9b00:1U (2.8) BS04 MG N/A GO:0000027 ... P60491 39019034
    938997 9b00:1U (2.8) BS05 MG N/A GO:0000027 ... P60491 39019034
    938998 9b00:1U (2.8) BS06 MG N/A GO:0000027 ... P60491 39019034
    938999 9b00:1U (2.8) BS07 MG N/A GO:0000027 ... P60491 39019034
    939000 9b00:1V (2.8) BS01 rna N/A GO:0003723 ... P60492 39019034

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).