SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    939001 9b00:1V (2.8) BS02 MG N/A GO:0003723 ... P60492 39019034
    939002 9b00:1V (2.8) BS03 MG N/A GO:0003723 ... P60492 39019034
    939003 9b00:1V (2.8) BS04 MG N/A GO:0003723 ... P60492 39019034
    939004 9b00:1V (2.8) BS05 MG N/A GO:0003723 ... P60492 39019034
    939005 9b00:1V (2.8) BS06 MG N/A GO:0003723 ... P60492 39019034
    939006 9b00:1V (2.8) BS07 MG N/A GO:0003723 ... P60492 39019034
    939007 9b00:1W (2.8) BS01 rna N/A GO:0003735 ... Q5SHP3 39019034
    939008 9b00:1W (2.8) BS02 MG N/A GO:0003735 ... Q5SHP3 39019034
    939009 9b00:1W (2.8) BS03 MG N/A GO:0003735 ... Q5SHP3 39019034
    939010 9b00:1W (2.8) BS04 MG N/A GO:0003735 ... Q5SHP3 39019034
    939011 9b00:1W (2.8) BS05 MG N/A GO:0003735 ... Q5SHP3 39019034
    939012 9b00:1X (2.8) BS01 rna N/A GO:0003735 ... Q5SHP0 39019034
    939013 9b00:1X (2.8) BS02 MG N/A GO:0003735 ... Q5SHP0 39019034
    939014 9b00:1X (2.8) BS03 MG N/A GO:0003735 ... Q5SHP0 39019034
    939015 9b00:1X (2.8) BS04 MG N/A GO:0003735 ... Q5SHP0 39019034
    939016 9b00:1X (2.8) BS05 MG N/A GO:0003735 ... Q5SHP0 39019034
    939017 9b00:1X (2.8) BS06 MG N/A GO:0003735 ... Q5SHP0 39019034
    939018 9b00:1Y (2.8) BS01 rna N/A GO:0003723 ... Q5SHP9 39019034
    939019 9b00:1Y (2.8) BS02 MG N/A GO:0003723 ... Q5SHP9 39019034
    939020 9b00:1Y (2.8) BS03 ZN N/A GO:0003723 ... Q5SHP9 39019034
    939021 9b00:1Z (2.8) BS01 rna N/A GO:0003723 ... Q5SHZ1 39019034
    939022 9b00:1Z (2.8) BS02 rna N/A GO:0003723 ... Q5SHZ1 39019034
    939023 9b00:1Z (2.8) BS03 MG N/A GO:0003723 ... Q5SHZ1 39019034
    939024 9b00:1b (2.8) BS01 rna N/A GO:0003735 ... P80371 39019034
    939025 9b00:1b (2.8) BS02 MG N/A GO:0003735 ... P80371 39019034
    939026 9b00:1c (2.8) BS01 rna N/A GO:0003676 ... P80372 39019034
    939027 9b00:1d (2.8) BS01 rna N/A GO:0003723 ... P80373 39019034
    939028 9b00:1d (2.8) BS02 SF4 N/A GO:0003723 ... P80373 39019034
    939029 9b00:1e (2.8) BS01 rna N/A GO:0003723 ... Q5SHQ5 39019034
    939030 9b00:1f (2.8) BS01 rna N/A GO:0003735 ... Q5SLP8 39019034
    939031 9b00:1g (2.8) BS01 rna N/A GO:0000049 ... P17291 39019034
    939032 9b00:1g (2.8) BS02 rna N/A GO:0000049 ... P17291 39019034
    939033 9b00:1h (2.8) BS01 rna N/A GO:0003735 ... P0DOY9 39019034
    939034 9b00:1i (2.8) BS01 rna N/A GO:0003723 ... P80374 39019034
    939035 9b00:1i (2.8) BS02 rna N/A GO:0003723 ... P80374 39019034
    939036 9b00:1j (2.8) BS01 rna N/A GO:0000049 ... Q5SHN7 39019034
    939037 9b00:1k (2.8) BS01 rna N/A GO:0003735 ... P80376 39019034
    939038 9b00:1k (2.8) BS02 MG N/A GO:0003735 ... P80376 39019034
    939039 9b00:1l (2.8) BS01 rna N/A GO:0000049 ... Q5SHN3 39019034
    939040 9b00:1m (2.8) BS01 rna N/A GO:0000049 ... P80377 39019034
    939041 9b00:1m (2.8) BS02 rna N/A GO:0000049 ... P80377 39019034
    939042 9b00:1m (2.8) BS03 rna N/A GO:0000049 ... P80377 39019034
    939043 9b00:1m (2.8) BS04 rna N/A GO:0000049 ... P80377 39019034
    939044 9b00:1m (2.8) BS05 MG N/A GO:0000049 ... P80377 39019034
    939045 9b00:1n (2.8) BS01 rna N/A GO:0003735 ... P0DOY6 39019034
    939046 9b00:1n (2.8) BS02 MG N/A GO:0003735 ... P0DOY6 39019034
    939047 9b00:1n (2.8) BS03 ZN N/A GO:0003735 ... P0DOY6 39019034
    939048 9b00:1o (2.8) BS01 rna N/A GO:0003735 ... Q5SJ76 39019034
    939049 9b00:1o (2.8) BS02 rna N/A GO:0003735 ... Q5SJ76 39019034
    939050 9b00:1p (2.8) BS01 rna N/A GO:0003735 ... Q5SJH3 39019034
    939051 9b00:1q (2.8) BS01 rna N/A GO:0003735 ... P0DOY7 39019034
    939052 9b00:1r (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ0 39019034
    939053 9b00:1s (2.8) BS01 rna N/A GO:0000028 ... Q5SHP2 39019034
    939054 9b00:1t (2.8) BS01 rna N/A GO:0003723 ... P80380 39019034
    939055 9b00:1t (2.8) BS02 MG N/A GO:0003723 ... P80380 39019034
    939056 9b00:20 (2.8) BS01 rna N/A GO:0003735 ... P60493 39019034
    939057 9b00:20 (2.8) BS02 rna N/A GO:0003735 ... P60493 39019034
    939058 9b00:21 (2.8) BS01 rna N/A GO:0003735 ... P60494 39019034
    939059 9b00:21 (2.8) BS02 rna N/A GO:0003735 ... P60494 39019034
    939060 9b00:21 (2.8) BS03 MG N/A GO:0003735 ... P60494 39019034
    939061 9b00:22 (2.8) BS01 rna N/A GO:0003735 ... Q5SHP6 39019034
    939062 9b00:23 (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ6 39019034
    939063 9b00:23 (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ6 39019034
    939064 9b00:23 (2.8) BS03 MG N/A GO:0003735 ... Q5SHQ6 39019034
    939065 9b00:24 (2.8) BS01 rna N/A GO:0003735 ... Q5SJE1 39019034
    939066 9b00:24 (2.8) BS02 ZN N/A GO:0003735 ... Q5SJE1 39019034
    939067 9b00:25 (2.8) BS01 rna N/A GO:0003735 ... P80339 39019034
    939068 9b00:25 (2.8) BS02 ZN N/A GO:0003735 ... P80339 39019034
    939069 9b00:26 (2.8) BS01 rna N/A GO:0003735 ... P35871 39019034
    939070 9b00:26 (2.8) BS02 ZN N/A GO:0003735 ... P35871 39019034
    939071 9b00:27 (2.8) BS01 rna N/A GO:0003735 ... P80340 39019034
    939072 9b00:27 (2.8) BS02 MG N/A GO:0003735 ... P80340 39019034
    939073 9b00:28 (2.8) BS01 rna N/A GO:0003735 ... Q5SKU1 39019034
    939074 9b00:28 (2.8) BS02 MG N/A GO:0003735 ... Q5SKU1 39019034
    939075 9b00:29 (2.8) BS01 rna N/A GO:0003735 ... Q5SHR2 39019034
    939076 9b00:29 (2.8) BS02 ZN N/A GO:0003735 ... Q5SHR2 39019034
    939077 9b00:2D (2.8) BS01 rna N/A GO:0002181 ... P60405 39019034
    939078 9b00:2D (2.8) BS02 rna N/A GO:0002181 ... P60405 39019034
    939079 9b00:2D (2.8) BS03 MG N/A GO:0002181 ... P60405 39019034
    939080 9b00:2D (2.8) BS04 MG N/A GO:0002181 ... P60405 39019034
    939081 9b00:2D (2.8) BS05 MG N/A GO:0002181 ... P60405 39019034
    939082 9b00:2D (2.8) BS06 MG N/A GO:0002181 ... P60405 39019034
    939083 9b00:2E (2.8) BS01 rna N/A GO:0003735 ... Q5SHN8 39019034
    939084 9b00:2E (2.8) BS02 MG N/A GO:0003735 ... Q5SHN8 39019034
    939085 9b00:2E (2.8) BS03 MG N/A GO:0003735 ... Q5SHN8 39019034
    939086 9b00:2F (2.8) BS01 rna N/A GO:0003735 ... Q5SHN9 39019034
    939087 9b00:2F (2.8) BS02 MG N/A GO:0003735 ... Q5SHN9 39019034
    939088 9b00:2F (2.8) BS03 MG N/A GO:0003735 ... Q5SHN9 39019034
    939089 9b00:2F (2.8) BS04 MG N/A GO:0003735 ... Q5SHN9 39019034
    939090 9b00:2G (2.8) BS01 rna N/A GO:0000049 ... Q5SHQ0 39019034
    939091 9b00:2G (2.8) BS02 rna N/A GO:0000049 ... Q5SHQ0 39019034
    939092 9b00:2G (2.8) BS03 rna N/A GO:0000049 ... Q5SHQ0 39019034
    939093 9b00:2H (2.8) BS01 rna N/A GO:0002181 ... P0DOY8 39019034
    939094 9b00:2I (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ1 39019034
    939095 9b00:2N (2.8) BS01 rna N/A GO:0003729 ... P60488 39019034
    939096 9b00:2O (2.8) BS01 rna N/A GO:0003735 ... Q5SHP8 39019034
    939097 9b00:2O (2.8) BS02 rna N/A GO:0003735 ... Q5SHP8 39019034
    939098 9b00:2O (2.8) BS03 MG N/A GO:0003735 ... Q5SHP8 39019034
    939099 9b00:2P (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ7 39019034
    939100 9b00:2P (2.8) BS02 MG N/A GO:0003735 ... Q5SHQ7 39019034
    939101 9b00:2Q (2.8) BS01 rna N/A GO:0003735 ... P60489 39019034
    939102 9b00:2Q (2.8) BS02 rna N/A GO:0003735 ... P60489 39019034
    939103 9b00:2Q (2.8) BS03 rna N/A GO:0003735 ... P60489 39019034
    939104 9b00:2Q (2.8) BS04 MG N/A GO:0003735 ... P60489 39019034
    939105 9b00:2R (2.8) BS01 rna N/A GO:0003735 ... Q9Z9H5 39019034
    939106 9b00:2S (2.8) BS01 rna N/A GO:0003735 ... Q5SHQ4 39019034
    939107 9b00:2S (2.8) BS02 rna N/A GO:0003735 ... Q5SHQ4 39019034
    939108 9b00:2T (2.8) BS01 rna N/A GO:0003735 ... P60490 39019034
    939109 9b00:2T (2.8) BS02 rna N/A GO:0003735 ... P60490 39019034
    939110 9b00:2T (2.8) BS03 MG N/A GO:0003735 ... P60490 39019034
    939111 9b00:2U (2.8) BS01 rna N/A GO:0000027 ... P60491 39019034
    939112 9b00:2V (2.8) BS01 rna N/A GO:0003723 ... P60492 39019034
    939113 9b00:2V (2.8) BS02 MG N/A GO:0003723 ... P60492 39019034
    939114 9b00:2W (2.8) BS01 rna N/A GO:0003735 ... Q5SHP3 39019034
    939115 9b00:2W (2.8) BS02 MG N/A GO:0003735 ... Q5SHP3 39019034
    939116 9b00:2X (2.8) BS01 rna N/A GO:0003735 ... Q5SHP0 39019034
    939117 9b00:2X (2.8) BS02 MG N/A GO:0003735 ... Q5SHP0 39019034
    939118 9b00:2Y (2.8) BS01 rna N/A GO:0003723 ... Q5SHP9 39019034
    939119 9b00:2Y (2.8) BS02 ZN N/A GO:0003723 ... Q5SHP9 39019034
    939120 9b00:2Z (2.8) BS01 rna N/A GO:0003723 ... Q5SHZ1 39019034
    939121 9b00:2Z (2.8) BS02 rna N/A GO:0003723 ... Q5SHZ1 39019034
    939122 9b00:2Z (2.8) BS03 MG N/A GO:0003723 ... Q5SHZ1 39019034
    939123 9b00:2b (2.8) BS01 rna N/A GO:0003735 ... P80371 39019034
    939124 9b00:2c (2.8) BS01 rna N/A GO:0003676 ... P80372 39019034
    939125 9b00:2d (2.8) BS01 rna N/A GO:0003723 ... P80373 39019034
    939126 9b00:2d (2.8) BS02 MG N/A GO:0003723 ... P80373 39019034
    939127 9b00:2d (2.8) BS03 SF4 N/A GO:0003723 ... P80373 39019034
    939128 9b00:2e (2.8) BS01 rna N/A GO:0003723 ... Q5SHQ5 39019034
    939129 9b00:2e (2.8) BS02 MG N/A GO:0003723 ... Q5SHQ5 39019034
    939130 9b00:2f (2.8) BS01 rna N/A GO:0003735 ... Q5SLP8 39019034
    939131 9b00:2f (2.8) BS02 MG N/A GO:0003735 ... Q5SLP8 39019034
    939132 9b00:2g (2.8) BS01 rna N/A GO:0000049 ... P17291 39019034
    939133 9b00:2g (2.8) BS02 rna N/A GO:0000049 ... P17291 39019034
    939134 9b00:2h (2.8) BS01 rna N/A GO:0003735 ... P0DOY9 39019034
    939135 9b00:2i (2.8) BS01 rna N/A GO:0003723 ... P80374 39019034
    939136 9b00:2j (2.8) BS01 rna N/A GO:0000049 ... Q5SHN7 39019034
    939137 9b00:2j (2.8) BS02 MG N/A GO:0000049 ... Q5SHN7 39019034
    939138 9b00:2k (2.8) BS01 rna N/A GO:0003735 ... P80376 39019034
    939139 9b00:2k (2.8) BS02 MG N/A GO:0003735 ... P80376 39019034
    939140 9b00:2l (2.8) BS01 rna N/A GO:0000049 ... Q5SHN3 39019034
    939141 9b00:2l (2.8) BS02 MG N/A GO:0000049 ... Q5SHN3 39019034
    939142 9b00:2l (2.8) BS03 MG N/A GO:0000049 ... Q5SHN3 39019034
    939143 9b00:2m (2.8) BS01 rna N/A GO:0000049 ... P80377 39019034
    939144 9b00:2m (2.8) BS02 rna N/A GO:0000049 ... P80377 39019034
    939145 9b00:2n (2.8) BS01 rna N/A GO:0003735 ... P0DOY6 39019034
    939146 9b00:2n (2.8) BS02 ZN N/A GO:0003735 ... P0DOY6 39019034
    939147 9b00:2o (2.8) BS01 rna N/A GO:0003735 ... Q5SJ76 39019034
    939148 9b00:2o (2.8) BS02 rna N/A GO:0003735 ... Q5SJ76 39019034
    939149 9b00:2p (2.8) BS01 rna N/A GO:0003735 ... Q5SJH3 39019034
    939150 9b00:2q (2.8) BS01 rna N/A GO:0003735 ... P0DOY7 39019034
    939151 9b00:2q (2.8) BS02 MG N/A GO:0003735 ... P0DOY7 39019034
    939152 9b00:2r (2.8) BS01 rna N/A GO:0003735 ... Q5SLQ0 39019034
    939153 9b00:2s (2.8) BS01 rna N/A GO:0000028 ... Q5SHP2 39019034
    939154 9b00:2t (2.8) BS01 rna N/A GO:0003723 ... P80380 39019034
    939155 9b03:A (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939156 9b03:B (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939157 9b03:C (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939158 9b03:C (2.95) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    939159 9b03:D (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939160 9b03:E (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939161 9b03:F (2.95) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939162 9b04:A (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939163 9b04:B (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939164 9b04:C (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939165 9b04:D (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939166 9b04:E (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939167 9b04:F (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939168 9b04:G (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939169 9b04:H (2.52) BS01 ADP N/A GO:0003824 ... P12532 39904336
    939170 9b06:A (1.75) BS01 LCZ N/A GO:0006508 ... P9WPC1 39626090
    939171 9b06:A (1.75) BS02 THR N/A GO:0006508 ... P9WPC1 39626090
    939172 9b06:B (1.75) BS01 LCZ N/A GO:0006508 ... P9WPC1 39626090
    939173 9b06:B (1.75) BS02 THR N/A GO:0006508 ... P9WPC1 39626090
    939174 9b07:A (1.88) BS01 FAD N/A GO:0003824 ... Q84HF5 N/A
    939175 9b07:A (1.88) BS02 A1AIU N/A GO:0003824 ... Q84HF5 N/A
    939176 9b07:B (1.88) BS01 FAD N/A GO:0003824 ... Q84HF5 N/A
    939177 9b07:B (1.88) BS02 A1AIU N/A GO:0003824 ... Q84HF5 N/A
    939178 9b0a:A (1.87) BS01 peptide N/A N/A N/A N/A
    939179 9b0a:B (1.87) BS01 peptide N/A N/A N/A N/A
    939180 9b0b:A (1.7) BS01 peptide N/A N/A Q96CV9 N/A
    939181 9b0b:B (1.7) BS01 peptide N/A N/A Q96CV9 N/A
    939182 9b0b:C (1.7) BS01 peptide N/A N/A Q96CV9 N/A
    939183 9b0b:D (1.7) BS01 peptide N/A N/A Q96CV9 N/A
    939184 9b0c:A (1.66) BS01 827 N/A GO:0030170 ... Q70KE6 39207862
    939185 9b0c:A (1.66) BS02 PMP N/A GO:0030170 ... Q70KE6 39207862
    939186 9b0e:A (3.19) BS01 ADP N/A GO:0000049 ... G0S273 38585770
    939187 9b0e:A (3.19) BS02 A1AH4 N/A GO:0000049 ... G0S273 38585770
    939188 9b0e:B (3.19) BS01 ADP N/A GO:0000049 ... G0S273 38585770
    939189 9b0e:B (3.19) BS02 A1AH4 N/A GO:0000049 ... G0S273 38585770
    939190 9b0i:A (3.02) BS01 ADP N/A GO:0000049 ... G0S273 38585770
    939191 9b0i:A (3.02) BS02 A1AH4 N/A GO:0000049 ... G0S273 38585770
    939192 9b0i:B (3.02) BS01 ADP N/A GO:0000049 ... G0S273 38585770
    939193 9b0i:B (3.02) BS02 A1AH4 N/A GO:0000049 ... G0S273 38585770
    939194 9b0k:A (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939195 9b0k:B (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939196 9b0k:C (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939197 9b0k:C (3.03) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    939198 9b0k:D (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939199 9b0k:E (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    939200 9b0k:F (3.03) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).