SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4687 4688 4689 4690 4691 4692 4693 4694 4695 4696 4697 4698 4699 4700 4701 4702 4703 4704 4705 4706 4707 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    939201 9b0l:P (2.99) BS01 dna N/A GO:0003677 ... Q5UPF5 39354233
    939202 9b0l:P (2.99) BS02 dna N/A GO:0003677 ... Q5UPF5 39354233
    939203 9b0l:P (2.99) BS03 dna N/A GO:0003677 ... Q5UPF5 39354233
    939204 9b0l:P (2.99) BS04 rna N/A GO:0003677 ... Q5UPF5 39354233
    939205 9b0l:P (2.99) BS05 ZN N/A GO:0003677 ... Q5UPF5 39354233
    939206 9b0l:P (2.99) BS06 MG N/A GO:0003677 ... Q5UPF5 39354233
    939207 9b0p:CA (2.82) BS01 rna N/A GO:0003676 ... Q9UQ80 N/A
    939208 9b0p:CB (2.82) BS01 rna N/A GO:0002039 ... P13639 N/A
    939209 9b0p:CB (2.82) BS02 rna N/A GO:0002039 ... P13639 N/A
    939210 9b0p:CD (2.82) BS01 rna N/A GO:0003723 ... Q8NC51 N/A
    939211 9b0p:LA (2.82) BS01 rna N/A GO:0002181 ... P62917 N/A
    939212 9b0p:LA (2.82) BS02 rna N/A GO:0002181 ... P62917 N/A
    939213 9b0p:LA (2.82) BS03 MG N/A GO:0002181 ... P62917 N/A
    939214 9b0p:LB (2.82) BS01 rna N/A GO:0002181 ... P39023 N/A
    939215 9b0p:LC (2.82) BS01 rna N/A GO:0003735 ... P36578 N/A
    939216 9b0p:LC (2.82) BS02 rna N/A GO:0003735 ... P36578 N/A
    939217 9b0p:LD (2.82) BS01 rna N/A GO:0000027 ... P46777 N/A
    939218 9b0p:LD (2.82) BS02 rna N/A GO:0000027 ... P46777 N/A
    939219 9b0p:LE (2.82) BS01 rna N/A GO:0003735 ... Q02878 N/A
    939220 9b0p:LF (2.82) BS01 rna N/A GO:0000463 ... P18124 N/A
    939221 9b0p:LF (2.82) BS02 rna N/A GO:0000463 ... P18124 N/A
    939222 9b0p:LG (2.82) BS01 rna N/A GO:0000470 ... P62424 N/A
    939223 9b0p:LG (2.82) BS02 rna N/A GO:0000470 ... P62424 N/A
    939224 9b0p:LH (2.82) BS01 rna N/A GO:0002181 ... P32969 N/A
    939225 9b0p:LI (2.82) BS01 rna N/A GO:0000027 ... Q96L21 N/A
    939226 9b0p:LI (2.82) BS02 rna N/A GO:0000027 ... Q96L21 N/A
    939227 9b0p:LJ (2.82) BS01 rna N/A GO:0000027 ... P62913 N/A
    939228 9b0p:LJ (2.82) BS02 rna N/A GO:0000027 ... P62913 N/A
    939229 9b0p:LL (2.82) BS01 rna N/A GO:0002181 ... P26373 N/A
    939230 9b0p:LL (2.82) BS02 rna N/A GO:0002181 ... P26373 N/A
    939231 9b0p:LM (2.82) BS01 rna N/A GO:0003723 ... P50914 N/A
    939232 9b0p:LN (2.82) BS01 rna N/A GO:0002181 ... P61313 N/A
    939233 9b0p:LN (2.82) BS02 rna N/A GO:0002181 ... P61313 N/A
    939234 9b0p:LO (2.82) BS01 rna N/A GO:0002181 ... P40429 N/A
    939235 9b0p:LP (2.82) BS01 rna N/A GO:0003735 ... P18621 N/A
    939236 9b0p:LP (2.82) BS02 rna N/A GO:0003735 ... P18621 N/A
    939237 9b0p:LQ (2.82) BS01 rna N/A GO:0002181 ... Q07020 N/A
    939238 9b0p:LR (2.82) BS01 rna N/A GO:0002181 ... P84098 N/A
    939239 9b0p:LR (2.82) BS02 rna N/A GO:0002181 ... P84098 N/A
    939240 9b0p:LS (2.82) BS01 rna N/A GO:0002181 ... Q02543 N/A
    939241 9b0p:LS (2.82) BS02 rna N/A GO:0002181 ... Q02543 N/A
    939242 9b0p:LT (2.82) BS01 rna N/A GO:0001650 ... P46778 N/A
    939243 9b0p:LT (2.82) BS02 rna N/A GO:0001650 ... P46778 N/A
    939244 9b0p:LU (2.82) BS01 rna N/A GO:0003735 ... P35268 N/A
    939245 9b0p:LV (2.82) BS01 rna N/A GO:0000122 ... P62829 N/A
    939246 9b0p:LW (2.82) BS01 rna N/A GO:0003735 ... P83731 N/A
    939247 9b0p:LW (2.82) BS02 rna N/A GO:0003735 ... P83731 N/A
    939248 9b0p:LX (2.82) BS01 rna N/A GO:0003735 ... P62750 N/A
    939249 9b0p:LX (2.82) BS02 rna N/A GO:0003735 ... P62750 N/A
    939250 9b0p:LY (2.82) BS01 rna N/A GO:0002181 ... P61254 N/A
    939251 9b0p:LY (2.82) BS02 rna N/A GO:0002181 ... P61254 N/A
    939252 9b0p:LZ (2.82) BS01 rna N/A GO:0002181 ... P61353 N/A
    939253 9b0p:La (2.82) BS01 rna N/A GO:0002181 ... P46776 N/A
    939254 9b0p:Lb (2.82) BS01 rna N/A GO:0003735 ... P47914 N/A
    939255 9b0p:Lc (2.82) BS01 rna N/A GO:0003723 ... P62888 N/A
    939256 9b0p:Ld (2.82) BS01 rna N/A GO:0003735 ... P62899 N/A
    939257 9b0p:Le (2.82) BS01 rna N/A GO:0002181 ... P62910 N/A
    939258 9b0p:Le (2.82) BS02 MG N/A GO:0002181 ... P62910 N/A
    939259 9b0p:Lf (2.82) BS01 rna N/A GO:0002181 ... P18077 N/A
    939260 9b0p:Lg (2.82) BS01 rna N/A GO:0002181 ... P49207 N/A
    939261 9b0p:Lg (2.82) BS02 MG N/A GO:0002181 ... P49207 N/A
    939262 9b0p:Lg (2.82) BS03 ZN N/A GO:0002181 ... P49207 N/A
    939263 9b0p:Lh (2.82) BS01 rna N/A GO:0000463 ... P42766 N/A
    939264 9b0p:Lh (2.82) BS02 rna N/A GO:0000463 ... P42766 N/A
    939265 9b0p:Li (2.82) BS01 rna N/A GO:0002181 ... Q9Y3U8 N/A
    939266 9b0p:Lj (2.82) BS01 rna N/A GO:0003735 ... P61927 N/A
    939267 9b0p:Lj (2.82) BS02 rna N/A GO:0003735 ... P61927 N/A
    939268 9b0p:Lj (2.82) BS03 ZN N/A GO:0003735 ... P61927 N/A
    939269 9b0p:Lk (2.82) BS01 rna N/A GO:0002181 ... P63173 N/A
    939270 9b0p:Ll (2.82) BS01 rna N/A GO:0002181 ... P62891 N/A
    939271 9b0p:Ll (2.82) BS02 rna N/A GO:0002181 ... P62891 N/A
    939272 9b0p:Lm (2.82) BS01 rna N/A GO:0003735 ... P62987 N/A
    939273 9b0p:Lm (2.82) BS02 ZN N/A GO:0003735 ... P62987 N/A
    939274 9b0p:Lo (2.82) BS01 rna N/A GO:0002181 ... P83881 N/A
    939275 9b0p:Lo (2.82) BS02 rna N/A GO:0002181 ... P83881 N/A
    939276 9b0p:Lo (2.82) BS03 ZN N/A GO:0002181 ... P83881 N/A
    939277 9b0p:Lp (2.82) BS01 rna N/A GO:0002181 ... P61513 N/A
    939278 9b0p:Lp (2.82) BS02 ZN N/A GO:0002181 ... P61513 N/A
    939279 9b0p:Lr (2.82) BS01 rna N/A GO:0002181 ... P46779 N/A
    939280 9b0p:Ls (2.82) BS01 rna N/A N/A P05388 N/A
    939281 9b0p:Lt (2.82) BS01 rna N/A GO:0003735 ... P30050 N/A
    939282 9b0p:Lz (2.82) BS01 rna N/A GO:0002181 ... P62906 N/A
    939283 9b0p:SA (2.82) BS01 rna N/A GO:0003735 ... P08865 N/A
    939284 9b0p:SB (2.82) BS01 rna N/A GO:0003735 ... P61247 N/A
    939285 9b0p:SC (2.82) BS01 rna N/A GO:0003723 ... P15880 N/A
    939286 9b0p:SD (2.82) BS01 rna N/A GO:0001228 ... P23396 N/A
    939287 9b0p:SE (2.82) BS01 rna N/A GO:0002181 ... P62701 N/A
    939288 9b0p:SF (2.82) BS01 rna N/A GO:0002181 ... P46782 N/A
    939289 9b0p:SG (2.82) BS01 rna N/A GO:0002181 ... P62753 N/A
    939290 9b0p:SH (2.82) BS01 rna N/A GO:0002181 ... P62081 N/A
    939291 9b0p:SI (2.82) BS01 rna N/A GO:0002181 ... P62241 N/A
    939292 9b0p:SI (2.82) BS02 rna N/A GO:0002181 ... P62241 N/A
    939293 9b0p:SJ (2.82) BS01 rna N/A GO:0002181 ... P46781 N/A
    939294 9b0p:SK (2.82) BS01 rna N/A N/A P46783 N/A
    939295 9b0p:SL (2.82) BS01 rna N/A GO:0002181 ... P62280 N/A
    939296 9b0p:SM (2.82) BS01 rna N/A GO:0002181 ... P25398 N/A
    939297 9b0p:SN (2.82) BS01 rna N/A GO:0000462 ... P62277 N/A
    939298 9b0p:SO (2.82) BS01 rna N/A GO:0000028 ... P62263 N/A
    939299 9b0p:SP (2.82) BS01 rna N/A GO:0003723 ... P62841 N/A
    939300 9b0p:SQ (2.82) BS01 rna N/A GO:0000462 ... P62249 N/A
    939301 9b0p:SS (2.82) BS01 rna N/A GO:0002181 ... P62269 N/A
    939302 9b0p:ST (2.82) BS01 rna N/A GO:0000028 ... P39019 N/A
    939303 9b0p:SU (2.82) BS01 rna N/A GO:0003723 ... P60866 N/A
    939304 9b0p:SW (2.82) BS01 rna N/A GO:0002181 ... P62244 N/A
    939305 9b0p:SX (2.82) BS01 rna N/A GO:0002181 ... P62266 N/A
    939306 9b0p:SY (2.82) BS01 rna N/A GO:0002181 ... P62847 N/A
    939307 9b0p:SZ (2.82) BS01 rna N/A N/A P62851 N/A
    939308 9b0p:Sa (2.82) BS01 rna N/A GO:0003735 ... P62854 N/A
    939309 9b0p:Sa (2.82) BS02 ZN N/A GO:0003735 ... P62854 N/A
    939310 9b0p:Sb (2.82) BS01 rna N/A GO:0002181 ... P42677 N/A
    939311 9b0p:Sc (2.82) BS01 rna N/A GO:0000028 ... P62857 N/A
    939312 9b0p:Sd (2.82) BS01 rna N/A GO:0002181 ... P62273 N/A
    939313 9b0p:Se (2.82) BS01 rna N/A GO:0003735 ... P62861 N/A
    939314 9b0p:Sf (2.82) BS01 rna N/A GO:0003735 ... P62979 N/A
    939315 9b0p:Sg (2.82) BS01 rna N/A GO:0001891 ... P63244 N/A
    939316 9b0q:CB (3.2) BS01 rna N/A GO:0002039 ... P13639 N/A
    939317 9b0q:CB (3.2) BS02 rna N/A GO:0002039 ... P13639 N/A
    939318 9b0q:CH (3.2) BS01 rna N/A GO:0003677 ... O60869 N/A
    939319 9b0q:LA (3.2) BS01 rna N/A GO:0002181 ... P62917 N/A
    939320 9b0q:LA (3.2) BS02 rna N/A GO:0002181 ... P62917 N/A
    939321 9b0q:LA (3.2) BS03 MG N/A GO:0002181 ... P62917 N/A
    939322 9b0q:LB (3.2) BS01 rna N/A GO:0002181 ... P39023 N/A
    939323 9b0q:LC (3.2) BS01 rna N/A GO:0003735 ... P36578 N/A
    939324 9b0q:LC (3.2) BS02 rna N/A GO:0003735 ... P36578 N/A
    939325 9b0q:LD (3.2) BS01 rna N/A GO:0000027 ... P46777 N/A
    939326 9b0q:LD (3.2) BS02 rna N/A GO:0000027 ... P46777 N/A
    939327 9b0q:LE (3.2) BS01 rna N/A GO:0003735 ... Q02878 N/A
    939328 9b0q:LF (3.2) BS01 rna N/A GO:0000463 ... P18124 N/A
    939329 9b0q:LF (3.2) BS02 rna N/A GO:0000463 ... P18124 N/A
    939330 9b0q:LG (3.2) BS01 rna N/A GO:0000470 ... P62424 N/A
    939331 9b0q:LG (3.2) BS02 rna N/A GO:0000470 ... P62424 N/A
    939332 9b0q:LG (3.2) BS03 rna N/A GO:0000470 ... P62424 N/A
    939333 9b0q:LH (3.2) BS01 rna N/A GO:0002181 ... P32969 N/A
    939334 9b0q:LI (3.2) BS01 rna N/A GO:0000027 ... Q96L21 N/A
    939335 9b0q:LI (3.2) BS02 rna N/A GO:0000027 ... Q96L21 N/A
    939336 9b0q:LI (3.2) BS03 rna N/A GO:0000027 ... Q96L21 N/A
    939337 9b0q:LJ (3.2) BS01 rna N/A GO:0000027 ... P62913 N/A
    939338 9b0q:LJ (3.2) BS02 rna N/A GO:0000027 ... P62913 N/A
    939339 9b0q:LL (3.2) BS01 rna N/A GO:0002181 ... P26373 N/A
    939340 9b0q:LM (3.2) BS01 rna N/A GO:0003723 ... P50914 N/A
    939341 9b0q:LN (3.2) BS01 rna N/A GO:0002181 ... P61313 N/A
    939342 9b0q:LN (3.2) BS02 rna N/A GO:0002181 ... P61313 N/A
    939343 9b0q:LO (3.2) BS01 rna N/A GO:0002181 ... P40429 N/A
    939344 9b0q:LP (3.2) BS01 rna N/A GO:0003735 ... P18621 N/A
    939345 9b0q:LP (3.2) BS02 rna N/A GO:0003735 ... P18621 N/A
    939346 9b0q:LQ (3.2) BS01 rna N/A GO:0002181 ... Q07020 N/A
    939347 9b0q:LR (3.2) BS01 rna N/A GO:0002181 ... P84098 N/A
    939348 9b0q:LR (3.2) BS02 rna N/A GO:0002181 ... P84098 N/A
    939349 9b0q:LS (3.2) BS01 rna N/A GO:0002181 ... Q02543 N/A
    939350 9b0q:LS (3.2) BS02 rna N/A GO:0002181 ... Q02543 N/A
    939351 9b0q:LT (3.2) BS01 rna N/A GO:0001650 ... P46778 N/A
    939352 9b0q:LT (3.2) BS02 rna N/A GO:0001650 ... P46778 N/A
    939353 9b0q:LU (3.2) BS01 rna N/A GO:0003735 ... P35268 N/A
    939354 9b0q:LV (3.2) BS01 rna N/A GO:0000122 ... P62829 N/A
    939355 9b0q:LV (3.2) BS02 rna N/A GO:0000122 ... P62829 N/A
    939356 9b0q:LW (3.2) BS01 rna N/A GO:0003735 ... P83731 N/A
    939357 9b0q:LW (3.2) BS02 rna N/A GO:0003735 ... P83731 N/A
    939358 9b0q:LX (3.2) BS01 rna N/A GO:0003735 ... P62750 N/A
    939359 9b0q:LX (3.2) BS02 rna N/A GO:0003735 ... P62750 N/A
    939360 9b0q:LY (3.2) BS01 rna N/A GO:0002181 ... P61254 N/A
    939361 9b0q:LY (3.2) BS02 rna N/A GO:0002181 ... P61254 N/A
    939362 9b0q:LZ (3.2) BS01 rna N/A GO:0002181 ... P61353 N/A
    939363 9b0q:La (3.2) BS01 rna N/A GO:0002181 ... P46776 N/A
    939364 9b0q:Lb (3.2) BS01 rna N/A GO:0003735 ... P47914 N/A
    939365 9b0q:Lc (3.2) BS01 rna N/A GO:0003723 ... P62888 N/A
    939366 9b0q:Lc (3.2) BS02 rna N/A GO:0003723 ... P62888 N/A
    939367 9b0q:Ld (3.2) BS01 rna N/A GO:0003735 ... P62899 N/A
    939368 9b0q:Le (3.2) BS01 rna N/A GO:0002181 ... P62910 N/A
    939369 9b0q:Le (3.2) BS02 MG N/A GO:0002181 ... P62910 N/A
    939370 9b0q:Lf (3.2) BS01 rna N/A GO:0002181 ... P18077 N/A
    939371 9b0q:Lg (3.2) BS01 rna N/A GO:0002181 ... P49207 N/A
    939372 9b0q:Lg (3.2) BS02 ZN N/A GO:0002181 ... P49207 N/A
    939373 9b0q:Lh (3.2) BS01 rna N/A GO:0000463 ... P42766 N/A
    939374 9b0q:Lh (3.2) BS02 rna N/A GO:0000463 ... P42766 N/A
    939375 9b0q:Li (3.2) BS01 rna N/A GO:0002181 ... Q9Y3U8 N/A
    939376 9b0q:Lj (3.2) BS01 rna N/A GO:0003735 ... P61927 N/A
    939377 9b0q:Lj (3.2) BS02 rna N/A GO:0003735 ... P61927 N/A
    939378 9b0q:Lj (3.2) BS03 ZN N/A GO:0003735 ... P61927 N/A
    939379 9b0q:Lk (3.2) BS01 rna N/A GO:0002181 ... P63173 N/A
    939380 9b0q:Ll (3.2) BS01 rna N/A GO:0002181 ... P62891 N/A
    939381 9b0q:Ll (3.2) BS02 rna N/A GO:0002181 ... P62891 N/A
    939382 9b0q:Lm (3.2) BS01 rna N/A GO:0003735 ... P62987 N/A
    939383 9b0q:Lm (3.2) BS02 ZN N/A GO:0003735 ... P62987 N/A
    939384 9b0q:Lo (3.2) BS01 rna N/A GO:0002181 ... P83881 N/A
    939385 9b0q:Lo (3.2) BS02 rna N/A GO:0002181 ... P83881 N/A
    939386 9b0q:Lo (3.2) BS03 ZN N/A GO:0002181 ... P83881 N/A
    939387 9b0q:Lp (3.2) BS01 rna N/A GO:0002181 ... P61513 N/A
    939388 9b0q:Lp (3.2) BS02 rna N/A GO:0002181 ... P61513 N/A
    939389 9b0q:Lp (3.2) BS03 ZN N/A GO:0002181 ... P61513 N/A
    939390 9b0q:Lr (3.2) BS01 rna N/A GO:0002181 ... P46779 N/A
    939391 9b0q:Ls (3.2) BS01 rna N/A N/A P05388 N/A
    939392 9b0q:Lt (3.2) BS01 rna N/A GO:0003735 ... P30050 N/A
    939393 9b0q:Lz (3.2) BS01 rna N/A GO:0002181 ... P62906 N/A
    939394 9b0q:SA (3.2) BS01 rna N/A GO:0003735 ... P08865 N/A
    939395 9b0q:SB (3.2) BS01 rna N/A GO:0003735 ... P61247 N/A
    939396 9b0q:SC (3.2) BS01 rna N/A GO:0003723 ... P15880 N/A
    939397 9b0q:SD (3.2) BS01 rna N/A GO:0001228 ... P23396 N/A
    939398 9b0q:SE (3.2) BS01 rna N/A GO:0002181 ... P62701 N/A
    939399 9b0q:SF (3.2) BS01 rna N/A GO:0002181 ... P46782 N/A
    939400 9b0q:SG (3.2) BS01 rna N/A GO:0002181 ... P62753 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).