SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4692 4693 4694 4695 4696 4697 4698 4699 4700 4701 4702 4703 4704 4705 4706 4707 4708 4709 4710 4711 4712 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    940201 9b24:2 (2.47) BS01 rna N/A GO:0003735 ... A0QSL4 N/A
    940202 9b24:2 (2.47) BS02 ZN N/A GO:0003735 ... A0QSL4 N/A
    940203 9b24:C (2.47) BS01 rna N/A GO:0003676 ... A0QSD7 N/A
    940204 9b24:D (2.47) BS01 rna N/A GO:0003723 ... A0QSL7 N/A
    940205 9b24:E (2.47) BS01 rna N/A GO:0003723 ... A0QSG6 N/A
    940206 9b24:E (2.47) BS02 MG N/A GO:0003723 ... A0QSG6 N/A
    940207 9b24:F (2.47) BS01 rna N/A GO:0003735 ... A0R7F9 N/A
    940208 9b24:G (2.47) BS01 rna N/A GO:0000049 ... A0QS97 N/A
    940209 9b24:H (2.47) BS01 rna N/A GO:0003735 ... A0QSG3 N/A
    940210 9b24:I (2.47) BS01 rna N/A GO:0003723 ... A0QSP9 N/A
    940211 9b24:J (2.47) BS01 rna N/A GO:0000049 ... A0QSD0 N/A
    940212 9b24:K (2.47) BS01 rna N/A GO:0003735 ... A0QSL6 N/A
    940213 9b24:L (2.47) BS01 rna N/A GO:0000049 ... A0QS96 N/A
    940214 9b24:M (2.47) BS01 rna N/A GO:0000049 ... A0QSL5 N/A
    940215 9b24:N (2.47) BS01 rna N/A GO:0003735 ... A0QSG2 N/A
    940216 9b24:N (2.47) BS02 MG N/A GO:0003735 ... A0QSG2 N/A
    940217 9b24:N (2.47) BS03 ZN N/A GO:0003735 ... A0QSG2 N/A
    940218 9b24:O (2.47) BS01 rna N/A GO:0003735 ... A0QVQ3 N/A
    940219 9b24:O (2.47) BS02 rna N/A GO:0003735 ... A0QVQ3 N/A
    940220 9b24:P (2.47) BS01 rna N/A GO:0003735 ... A0QV37 N/A
    940221 9b24:Q (2.47) BS01 rna N/A GO:0003735 ... A0QSE0 N/A
    940222 9b24:Q (2.47) BS02 MG N/A GO:0003735 ... A0QSE0 N/A
    940223 9b24:Q (2.47) BS03 MG N/A GO:0003735 ... A0QSE0 N/A
    940224 9b24:R (2.47) BS01 rna N/A GO:0003735 ... A0R7F7 N/A
    940225 9b24:R (2.47) BS02 ZN N/A GO:0003735 ... A0R7F7 N/A
    940226 9b24:T (2.47) BS01 rna N/A GO:0003723 ... A0R102 N/A
    940227 9b24:V (2.47) BS01 rna N/A GO:0003735 ... A0QVB8 N/A
    940228 9b24:Z (2.47) BS01 rna N/A GO:0002181 ... A0QSD4 N/A
    940229 9b24:Z (2.47) BS02 MG N/A GO:0002181 ... A0QSD4 N/A
    940230 9b24:Z (2.47) BS03 MG N/A GO:0002181 ... A0QSD4 N/A
    940231 9b24:Z (2.47) BS04 MG N/A GO:0002181 ... A0QSD4 N/A
    940232 9b24:Z (2.47) BS05 MG N/A GO:0002181 ... A0QSD4 N/A
    940233 9b24:Z (2.47) BS06 MG N/A GO:0002181 ... A0QSD4 N/A
    940234 9b24:a (2.47) BS01 rna N/A GO:0003735 ... A0QSD1 N/A
    940235 9b24:b (2.47) BS01 rna N/A GO:0003735 ... A0QSD2 N/A
    940236 9b24:b (2.47) BS02 MG N/A GO:0003735 ... A0QSD2 N/A
    940237 9b24:c (2.47) BS01 rna N/A GO:0000049 ... A0QSG1 N/A
    940238 9b24:c (2.47) BS02 rna N/A GO:0000049 ... A0QSG1 N/A
    940239 9b24:d (2.47) BS01 rna N/A GO:0002181 ... A0QSG4 N/A
    940240 9b24:e (2.47) BS01 rna N/A GO:0003735 ... A0QS45 N/A
    940241 9b24:f (2.47) BS01 rna N/A GO:0003729 ... A0QSP8 N/A
    940242 9b24:g (2.47) BS01 rna N/A GO:0003735 ... A0QSF9 N/A
    940243 9b24:g (2.47) BS02 rna N/A GO:0003735 ... A0QSF9 N/A
    940244 9b24:h (2.47) BS01 rna N/A GO:0003735 ... A0QSG8 N/A
    940245 9b24:i (2.47) BS01 rna N/A GO:0003735 ... A0QSD8 N/A
    940246 9b24:i (2.47) BS02 MG N/A GO:0003735 ... A0QSD8 N/A
    940247 9b24:j (2.47) BS01 rna N/A GO:0003735 ... A0QSL9 N/A
    940248 9b24:k (2.47) BS01 rna N/A GO:0003735 ... A0QSG5 N/A
    940249 9b24:k (2.47) BS02 rna N/A GO:0003735 ... A0QSG5 N/A
    940250 9b24:l (2.47) BS01 rna N/A GO:0003735 ... A0QV42 N/A
    940251 9b24:m (2.47) BS01 rna N/A GO:0000027 ... A0QYU6 N/A
    940252 9b24:n (2.47) BS01 rna N/A GO:0003723 ... A0R151 N/A
    940253 9b24:o (2.47) BS01 rna N/A GO:0003735 ... A0QSD6 N/A
    940254 9b24:p (2.47) BS01 rna N/A GO:0003735 ... A0QSD3 N/A
    940255 9b24:q (2.47) BS01 rna N/A GO:0003723 ... A0QSG0 N/A
    940256 9b24:r (2.47) BS01 rna N/A GO:0003723 ... A0R3D2 N/A
    940257 9b24:r (2.47) BS02 rna N/A GO:0003723 ... A0R3D2 N/A
    940258 9b24:s (2.47) BS01 rna N/A GO:0003735 ... A0R150 N/A
    940259 9b24:t (2.47) BS01 rna N/A GO:0003735 ... A0QV03 N/A
    940260 9b24:t (2.47) BS02 MG N/A GO:0003735 ... A0QV03 N/A
    940261 9b24:t (2.47) BS03 ZN N/A GO:0003735 ... A0QV03 N/A
    940262 9b24:u (2.47) BS01 rna N/A GO:0003735 ... A0QSD9 N/A
    940263 9b24:v (2.47) BS01 rna N/A GO:0003735 ... A0QS62 N/A
    940264 9b24:w (2.47) BS01 rna N/A GO:0003735 ... A0QSG7 N/A
    940265 9b24:w (2.47) BS02 rna N/A GO:0003735 ... A0QSG7 N/A
    940266 9b24:x (2.47) BS01 rna N/A GO:0003735 ... A0R3I9 N/A
    940267 9b24:y (2.47) BS01 rna N/A GO:0003735 ... A0QS39 N/A
    940268 9b24:y (2.47) BS02 ZN N/A GO:0003735 ... A0QS39 N/A
    940269 9b24:z (2.47) BS01 rna N/A GO:0003735 ... A0R7K0 N/A
    940270 9b25:A (1.45) BS01 A1AIZ N/A N/A P03372 N/A
    940271 9b25:A (1.45) BS02 A1AIZ N/A N/A P03372 N/A
    940272 9b25:B (1.45) BS01 A1AIZ N/A N/A P03372 N/A
    940273 9b25:C (1.45) BS01 A1AIZ N/A N/A P03372 N/A
    940274 9b25:D (1.45) BS01 A1AIZ N/A N/A P03372 N/A
    940275 9b27:A (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940276 9b27:B (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940277 9b27:C (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940278 9b27:C (3.51) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    940279 9b27:D (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940280 9b27:E (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940281 9b27:F (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    940282 9b28:A (3.24) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940283 9b28:A (3.24) BS02 6OU N/A GO:0005216 ... J9SQF3 39809942
    940284 9b28:A (3.24) BS03 A1AIA N/A GO:0005216 ... J9SQF3 39809942
    940285 9b28:A (3.24) BS04 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940286 9b28:A (3.24) BS05 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940287 9b28:B (3.24) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940288 9b28:B (3.24) BS02 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940289 9b28:B (3.24) BS03 6OU N/A GO:0005216 ... J9SQF3 39809942
    940290 9b28:B (3.24) BS04 A1AIA N/A GO:0005216 ... J9SQF3 39809942
    940291 9b28:B (3.24) BS05 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940292 9b28:C (3.24) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940293 9b28:C (3.24) BS02 6OU N/A GO:0005216 ... J9SQF3 39809942
    940294 9b28:C (3.24) BS03 A1AIA N/A GO:0005216 ... J9SQF3 39809942
    940295 9b28:C (3.24) BS04 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940296 9b28:C (3.24) BS05 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940297 9b28:D (3.24) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940298 9b28:D (3.24) BS02 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940299 9b28:D (3.24) BS03 6OU N/A GO:0005216 ... J9SQF3 39809942
    940300 9b28:D (3.24) BS04 A1AIA N/A GO:0005216 ... J9SQF3 39809942
    940301 9b28:D (3.24) BS05 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940302 9b29:A (3.13) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940303 9b29:A (3.13) BS02 LBN N/A GO:0005216 ... J9SQF3 39809942
    940304 9b29:B (3.13) BS01 LBN N/A GO:0005216 ... J9SQF3 39809942
    940305 9b29:B (3.13) BS02 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940306 9b29:C (3.13) BS01 LBN N/A GO:0005216 ... J9SQF3 39809942
    940307 9b29:C (3.13) BS02 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940308 9b29:D (3.13) BS01 Y01 N/A GO:0005216 ... J9SQF3 39809942
    940309 9b29:D (3.13) BS02 LBN N/A GO:0005216 ... J9SQF3 39809942
    940310 9b2a:A (3.82) BS01 A1AIB N/A GO:0005216 ... J9SQF3 39809942
    940311 9b2a:A (3.82) BS02 A8W N/A GO:0005216 ... J9SQF3 39809942
    940312 9b2a:B (3.82) BS01 A1AIB N/A GO:0005216 ... J9SQF3 39809942
    940313 9b2a:B (3.82) BS02 A8W N/A GO:0005216 ... J9SQF3 39809942
    940314 9b2a:C (3.82) BS01 A1AIB N/A GO:0005216 ... J9SQF3 39809942
    940315 9b2a:C (3.82) BS02 A8W N/A GO:0005216 ... J9SQF3 39809942
    940316 9b2a:D (3.82) BS01 A8W N/A GO:0005216 ... J9SQF3 39809942
    940317 9b2a:D (3.82) BS02 A1AIB N/A GO:0005216 ... J9SQF3 39809942
    940318 9b2b:A (2.08) BS01 A1AI0 N/A N/A P03372 N/A
    940319 9b2b:B (2.08) BS01 A1AI0 N/A N/A P03372 N/A
    940320 9b2b:C (2.08) BS01 A1AI0 N/A N/A P03372 N/A
    940321 9b2b:D (2.08) BS01 A1AI0 N/A N/A P03372 N/A
    940322 9b2d:A (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940323 9b2d:A (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940324 9b2d:A (2.4) BS03 AF3 N/A GO:0000086 ... P25454 39898551
    940325 9b2d:B (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940326 9b2d:B (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940327 9b2d:B (2.4) BS03 ADP N/A GO:0000086 ... P25454 39898551
    940328 9b2d:B (2.4) BS04 AF3 N/A GO:0000086 ... P25454 39898551
    940329 9b2d:C (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940330 9b2d:C (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940331 9b2d:C (2.4) BS03 AF3 N/A GO:0000086 ... P25454 39898551
    940332 9b2d:C (2.4) BS04 ADP N/A GO:0000086 ... P25454 39898551
    940333 9b2d:D (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940334 9b2d:D (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940335 9b2d:D (2.4) BS03 ADP N/A GO:0000086 ... P25454 39898551
    940336 9b2d:D (2.4) BS04 AF3 N/A GO:0000086 ... P25454 39898551
    940337 9b2d:E (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940338 9b2d:E (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940339 9b2d:E (2.4) BS03 ADP N/A GO:0000086 ... P25454 39898551
    940340 9b2d:E (2.4) BS04 AF3 N/A GO:0000086 ... P25454 39898551
    940341 9b2d:F (2.4) BS01 dna N/A GO:0000086 ... P25454 39898551
    940342 9b2d:F (2.4) BS02 ADP N/A GO:0000086 ... P25454 39898551
    940343 9b2d:F (2.4) BS03 ADP N/A GO:0000086 ... P25454 39898551
    940344 9b2d:F (2.4) BS04 AF3 N/A GO:0000086 ... P25454 39898551
    940345 9b2e:A (1.95) BS01 B55 N/A GO:0004150 ... P9WNC5 39140692
    940346 9b2e:B (1.95) BS01 B55 N/A GO:0004150 ... P9WNC5 39140692
    940347 9b2f:A (1.662) BS01 NAD N/A N/A Q58NB6 N/A
    940348 9b2g:A (2.0) BS01 NAI N/A N/A Q58NB6 40945732
    940349 9b2g:B (2.0) BS01 NAI N/A N/A Q58NB6 40945732
    940350 9b2h:A (1.32) BS01 A1AIH N/A GO:0004190 ... Q7SSI0 38973505
    940351 9b2h:B (1.32) BS01 A1AIH N/A GO:0004190 ... Q7SSI0 38973505
    940352 9b2i:A (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940353 9b2i:A (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940354 9b2i:B (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940355 9b2i:B (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940356 9b2i:C (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940357 9b2i:C (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940358 9b2j:A (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940359 9b2j:A (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940360 9b2j:B (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940361 9b2j:B (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940362 9b2j:C (2.35) BS01 CO N/A N/A A0A023DFE8 39328773
    940363 9b2j:C (2.35) BS02 FE N/A N/A A0A023DFE8 39328773
    940364 9b2k:P (3.67) BS01 rna N/A GO:0003676 ... Q99ZW2 N/A
    940365 9b2l:A (2.2) BS01 FE N/A N/A A0A023DFE8 39328773
    940366 9b2l:A (2.2) BS02 CO N/A N/A A0A023DFE8 39328773
    940367 9b2l:B (2.2) BS01 FE N/A N/A A0A023DFE8 39328773
    940368 9b2l:B (2.2) BS02 CO N/A N/A A0A023DFE8 39328773
    940369 9b2n:A (1.9) BS01 CO N/A N/A A0A023DFE8 39328773
    940370 9b2n:B (1.9) BS01 CO N/A N/A A0A023DFE8 39328773
    940371 9b2n:C (1.9) BS01 CO N/A N/A A0A023DFE8 39328773
    940372 9b2o:F (1.85) BS01 A1AI3 N/A N/A A0A023DFE8 39328773
    940373 9b2o:F (1.85) BS02 CO N/A N/A A0A023DFE8 39328773
    940374 9b2o:F (1.85) BS03 FE N/A N/A A0A023DFE8 39328773
    940375 9b2o:L (1.85) BS01 A1AI3 N/A N/A A0A023DFE8 39328773
    940376 9b2o:L (1.85) BS02 CO N/A N/A A0A023DFE8 39328773
    940377 9b2o:L (1.85) BS03 FE N/A N/A A0A023DFE8 39328773
    940378 9b2o:X (1.85) BS01 A1AI3 N/A N/A A0A023DFE8 39328773
    940379 9b2o:X (1.85) BS02 CO N/A N/A A0A023DFE8 39328773
    940380 9b2o:X (1.85) BS03 FE N/A N/A A0A023DFE8 39328773
    940381 9b2p:A (2.25) BS01 CO N/A N/A A0A023DFE8 39328773
    940382 9b2p:A (2.25) BS02 FE N/A N/A A0A023DFE8 39328773
    940383 9b2p:P (2.25) BS01 CO N/A N/A A0A023DFE8 39328773
    940384 9b2p:P (2.25) BS02 FE N/A N/A A0A023DFE8 39328773
    940385 9b2p:X (2.25) BS01 CO N/A N/A A0A023DFE8 39328773
    940386 9b2p:X (2.25) BS02 FE N/A N/A A0A023DFE8 39328773
    940387 9b2s:A (3.01) BS01 dna N/A GO:0000786 ... P84233 39979508
    940388 9b2s:A (3.01) BS02 dna N/A GO:0000786 ... P84233 39979508
    940389 9b2s:B (3.01) BS01 dna N/A GO:0000786 ... P62799 39979508
    940390 9b2s:C (3.01) BS01 dna N/A GO:0000786 ... Q6AZJ8 39979508
    940391 9b2s:C (3.01) BS02 dna N/A GO:0000786 ... Q6AZJ8 39979508
    940392 9b2s:D (3.01) BS01 dna N/A GO:0000786 ... P02281 39979508
    940393 9b2s:D (3.01) BS02 dna N/A GO:0000786 ... P02281 39979508
    940394 9b2s:E (3.01) BS01 dna N/A GO:0000786 ... P84233 39979508
    940395 9b2s:E (3.01) BS02 dna N/A GO:0000786 ... P84233 39979508
    940396 9b2s:F (3.01) BS01 dna N/A GO:0000786 ... P62799 39979508
    940397 9b2s:G (3.01) BS01 dna N/A GO:0000786 ... Q6AZJ8 39979508
    940398 9b2s:G (3.01) BS02 dna N/A GO:0000786 ... Q6AZJ8 39979508
    940399 9b2s:H (3.01) BS01 dna N/A GO:0000786 ... P02281 39979508
    940400 9b2s:H (3.01) BS02 dna N/A GO:0000786 ... P02281 39979508

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).