SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    940601 9b4e:A (2.7) BS04 A1AIS N/A GO:0006659 ... P48651 39208797
    940602 9b4e:A (2.7) BS05 6OU N/A GO:0006659 ... P48651 39208797
    940603 9b4e:A (2.7) BS06 CA N/A GO:0006659 ... P48651 39208797
    940604 9b4e:A (2.7) BS07 LBN N/A GO:0006659 ... P48651 39208797
    940605 9b4e:A (2.7) BS08 LBN N/A GO:0006659 ... P48651 39208797
    940606 9b4e:B (2.7) BS01 LBN N/A GO:0006659 ... P48651 39208797
    940607 9b4e:B (2.7) BS02 LBN N/A GO:0006659 ... P48651 39208797
    940608 9b4e:B (2.7) BS03 P5S N/A GO:0006659 ... P48651 39208797
    940609 9b4e:B (2.7) BS04 P5S N/A GO:0006659 ... P48651 39208797
    940610 9b4e:B (2.7) BS05 LBN N/A GO:0006659 ... P48651 39208797
    940611 9b4e:B (2.7) BS06 A1AIS N/A GO:0006659 ... P48651 39208797
    940612 9b4e:B (2.7) BS07 6OU N/A GO:0006659 ... P48651 39208797
    940613 9b4e:B (2.7) BS08 CA N/A GO:0006659 ... P48651 39208797
    940614 9b4f:A (3.27) BS01 CA N/A GO:0005789 ... P48651 39208797
    940615 9b4f:B (3.27) BS01 CA N/A GO:0005789 ... P48651 39208797
    940616 9b4g:A (2.87) BS01 P5S N/A GO:0006659 ... P48651 39208797
    940617 9b4g:A (2.87) BS02 P5S N/A GO:0006659 ... P48651 39208797
    940618 9b4g:A (2.87) BS03 LBN N/A GO:0006659 ... P48651 39208797
    940619 9b4g:A (2.87) BS04 A1AIS N/A GO:0006659 ... P48651 39208797
    940620 9b4g:A (2.87) BS05 6OU N/A GO:0006659 ... P48651 39208797
    940621 9b4g:A (2.87) BS06 CA N/A GO:0006659 ... P48651 39208797
    940622 9b4g:A (2.87) BS07 A1AIT N/A GO:0006659 ... P48651 39208797
    940623 9b4g:A (2.87) BS08 LBN N/A GO:0006659 ... P48651 39208797
    940624 9b4g:A (2.87) BS09 LBN N/A GO:0006659 ... P48651 39208797
    940625 9b4g:B (2.87) BS01 LBN N/A GO:0006659 ... P48651 39208797
    940626 9b4g:B (2.87) BS02 LBN N/A GO:0006659 ... P48651 39208797
    940627 9b4g:B (2.87) BS03 P5S N/A GO:0006659 ... P48651 39208797
    940628 9b4g:B (2.87) BS04 P5S N/A GO:0006659 ... P48651 39208797
    940629 9b4g:B (2.87) BS05 LBN N/A GO:0006659 ... P48651 39208797
    940630 9b4g:B (2.87) BS06 A1AIS N/A GO:0006659 ... P48651 39208797
    940631 9b4g:B (2.87) BS07 6OU N/A GO:0006659 ... P48651 39208797
    940632 9b4g:B (2.87) BS08 CA N/A GO:0006659 ... P48651 39208797
    940633 9b4g:B (2.87) BS09 A1AIT N/A GO:0006659 ... P48651 39208797
    940634 9b4h:A (3.1) BS01 FUB ? N/A A8J9H7 38552624
    940635 9b4h:A (3.1) BS02 FUB ? N/A A8J9H7 38552624
    940636 9b4h:A (3.1) BS03 FUB ? N/A A8J9H7 38552624
    940637 9b4h:A (3.1) BS04 FUB ? N/A A8J9H7 38552624
    940638 9b4h:A (3.1) BS05 FUB ? N/A A8J9H7 38552624
    940639 9b4h:A (3.1) BS06 FUB ? N/A A8J9H7 38552624
    940640 9b4h:A (3.1) BS07 FUB ? N/A A8J9H7 38552624
    940641 9b4h:A (3.1) BS08 FUB ? N/A A8J9H7 38552624
    940642 9b4h:A (3.1) BS09 FUB ? N/A A8J9H7 38552624
    940643 9b4h:A (3.1) BS10 FUB ? N/A A8J9H7 38552624
    940644 9b4h:A (3.1) BS11 FUB ? N/A A8J9H7 38552624
    940645 9b4h:A (3.1) BS12 FUB ? N/A A8J9H7 38552624
    940646 9b4h:A (3.1) BS13 FUB ? N/A A8J9H7 38552624
    940647 9b4h:A (3.1) BS14 FUB ? N/A A8J9H7 38552624
    940648 9b4h:A (3.1) BS15 FUB ? N/A A8J9H7 38552624
    940649 9b4h:A (3.1) BS16 FUB ? N/A A8J9H7 38552624
    940650 9b4h:A (3.1) BS17 FUB ? N/A A8J9H7 38552624
    940651 9b4h:A (3.1) BS18 FUB ? N/A A8J9H7 38552624
    940652 9b4h:A (3.1) BS19 FUB ? N/A A8J9H7 38552624
    940653 9b4h:A (3.1) BS20 A1AIO ? N/A A8J9H7 38552624
    940654 9b4h:A (3.1) BS21 A1AIO ? N/A A8J9H7 38552624
    940655 9b4h:A (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    940656 9b4h:A (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    940657 9b4h:A (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    940658 9b4h:A (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    940659 9b4h:A (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    940660 9b4h:A (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    940661 9b4h:A (3.1) BS28 GLA ? N/A A8J9H7 38552624
    940662 9b4h:A (3.1) BS29 GLA ? N/A A8J9H7 38552624
    940663 9b4h:A (3.1) BS30 GLA ? N/A A8J9H7 38552624
    940664 9b4h:A (3.1) BS31 GLA ? N/A A8J9H7 38552624
    940665 9b4h:A (3.1) BS32 GLA ? N/A A8J9H7 38552624
    940666 9b4h:A (3.1) BS33 GLA ? N/A A8J9H7 38552624
    940667 9b4h:A (3.1) BS34 GLA ? N/A A8J9H7 38552624
    940668 9b4h:A (3.1) BS35 GLA ? N/A A8J9H7 38552624
    940669 9b4h:A (3.1) BS36 GLA ? N/A A8J9H7 38552624
    940670 9b4h:A (3.1) BS37 GLA ? N/A A8J9H7 38552624
    940671 9b4h:A (3.1) BS38 GLA ? N/A A8J9H7 38552624
    940672 9b4h:B (3.1) BS01 34V ? N/A A8J9H7 38552624
    940673 9b4h:B (3.1) BS02 FUB ? N/A A8J9H7 38552624
    940674 9b4h:B (3.1) BS03 FUB ? N/A A8J9H7 38552624
    940675 9b4h:B (3.1) BS04 FUB ? N/A A8J9H7 38552624
    940676 9b4h:B (3.1) BS05 FUB ? N/A A8J9H7 38552624
    940677 9b4h:B (3.1) BS06 FUB ? N/A A8J9H7 38552624
    940678 9b4h:B (3.1) BS07 FUB ? N/A A8J9H7 38552624
    940679 9b4h:B (3.1) BS08 FUB ? N/A A8J9H7 38552624
    940680 9b4h:B (3.1) BS09 FUB ? N/A A8J9H7 38552624
    940681 9b4h:B (3.1) BS10 FUB ? N/A A8J9H7 38552624
    940682 9b4h:B (3.1) BS11 FUB ? N/A A8J9H7 38552624
    940683 9b4h:B (3.1) BS12 FUB ? N/A A8J9H7 38552624
    940684 9b4h:B (3.1) BS13 FUB ? N/A A8J9H7 38552624
    940685 9b4h:B (3.1) BS14 FUB ? N/A A8J9H7 38552624
    940686 9b4h:B (3.1) BS15 FUB ? N/A A8J9H7 38552624
    940687 9b4h:B (3.1) BS16 FUB ? N/A A8J9H7 38552624
    940688 9b4h:B (3.1) BS17 FUB ? N/A A8J9H7 38552624
    940689 9b4h:B (3.1) BS18 FUB ? N/A A8J9H7 38552624
    940690 9b4h:B (3.1) BS19 FUB ? N/A A8J9H7 38552624
    940691 9b4h:B (3.1) BS20 FUB ? N/A A8J9H7 38552624
    940692 9b4h:B (3.1) BS21 FUB ? N/A A8J9H7 38552624
    940693 9b4h:B (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    940694 9b4h:B (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    940695 9b4h:B (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    940696 9b4h:B (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    940697 9b4h:B (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    940698 9b4h:B (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    940699 9b4h:B (3.1) BS28 A1AIO ? N/A A8J9H7 38552624
    940700 9b4h:B (3.1) BS29 A1AIO ? N/A A8J9H7 38552624
    940701 9b4h:B (3.1) BS30 GLA ? N/A A8J9H7 38552624
    940702 9b4h:B (3.1) BS31 GLA ? N/A A8J9H7 38552624
    940703 9b4h:B (3.1) BS32 GLA ? N/A A8J9H7 38552624
    940704 9b4h:B (3.1) BS33 GLA ? N/A A8J9H7 38552624
    940705 9b4h:B (3.1) BS34 GLA ? N/A A8J9H7 38552624
    940706 9b4h:B (3.1) BS35 GLA ? N/A A8J9H7 38552624
    940707 9b4h:B (3.1) BS36 GLA ? N/A A8J9H7 38552624
    940708 9b4h:B (3.1) BS37 GLA ? N/A A8J9H7 38552624
    940709 9b4h:B (3.1) BS38 GLA ? N/A A8J9H7 38552624
    940710 9b4h:B (3.1) BS39 GLA ? N/A A8J9H7 38552624
    940711 9b4l:A (3.1) BS01 EDT N/A GO:0000226 ... P10636 40634605
    940712 9b4l:M (3.1) BS01 EDT N/A GO:0000226 ... P10636 40634605
    940713 9b4l:Y (3.1) BS01 EDT N/A GO:0000226 ... P10636 40634605
    940714 9b4q:A (1.46) BS01 GNP N/A GO:0003924 ... P62070 39788953
    940715 9b4q:A (1.46) BS02 MG N/A GO:0003924 ... P62070 39788953
    940716 9b4r:A (2.1) BS01 GNP N/A GO:0003924 ... O14807 39788953
    940717 9b4r:A (2.1) BS02 ZN N/A GO:0003924 ... O14807 39788953
    940718 9b4s:A (3.1) BS01 5H5 N/A GO:0001944 ... P42336 39788953
    940719 9b4s:B (3.1) BS01 GNP N/A GO:0003924 ... P62070 39788953
    940720 9b4s:B (3.1) BS02 MG N/A GO:0003924 ... P62070 39788953
    940721 9b4t:A (2.75) BS01 5H5 N/A GO:0001944 ... P42336 39788953
    940722 9b4t:B (2.75) BS01 GNP N/A GO:0003924 ... O14807 39788953
    940723 9b4t:B (2.75) BS02 MG N/A GO:0003924 ... O14807 39788953
    940724 9b4u:A (2.21) BS01 A1AIR N/A N/A P42336 40504949
    940725 9b4u:B (2.21) BS01 A1AIR N/A N/A P42336 40504949
    940726 9b4z:AB (2.2) BS01 rna N/A GO:0000028 ... P0A7V0 40866347
    940727 9b4z:AC (2.2) BS01 rna N/A GO:0000028 ... P0A7V3 40866347
    940728 9b4z:AD (2.2) BS01 rna N/A GO:0000028 ... P0A7V8 40866347
    940729 9b4z:AE (2.2) BS01 rna N/A GO:0000028 ... P0A7W1 40866347
    940730 9b4z:AF (2.2) BS01 rna N/A GO:0002181 ... P02358 40866347
    940731 9b4z:AG (2.2) BS01 rna N/A GO:0000028 ... P02359 40866347
    940732 9b4z:AG (2.2) BS02 rna N/A GO:0000028 ... P02359 40866347
    940733 9b4z:AH (2.2) BS01 rna N/A GO:0000028 ... P0A7W7 40866347
    940734 9b4z:AI (2.2) BS01 rna N/A GO:0002181 ... P0A7X3 40866347
    940735 9b4z:AI (2.2) BS02 rna N/A GO:0002181 ... P0A7X3 40866347
    940736 9b4z:AJ (2.2) BS01 rna N/A GO:0000049 ... P0A7R5 40866347
    940737 9b4z:AK (2.2) BS01 rna N/A GO:0002181 ... P0A7R9 40866347
    940738 9b4z:AL (2.2) BS01 rna N/A GO:0000049 ... P0A7S3 40866347
    940739 9b4z:AM (2.2) BS01 rna N/A GO:0000049 ... P0A7S9 40866347
    940740 9b4z:AN (2.2) BS01 rna N/A GO:0000028 ... P0AG59 40866347
    940741 9b4z:AO (2.2) BS01 rna N/A GO:0000028 ... P0ADZ4 40866347
    940742 9b4z:AO (2.2) BS02 rna N/A GO:0000028 ... P0ADZ4 40866347
    940743 9b4z:AP (2.2) BS01 rna N/A GO:0000028 ... P0A7T3 40866347
    940744 9b4z:AQ (2.2) BS01 rna N/A GO:0000028 ... P0AG63 40866347
    940745 9b4z:AR (2.2) BS01 rna N/A GO:0002181 ... P0A7T7 40866347
    940746 9b4z:AS (2.2) BS01 rna N/A GO:0002181 ... P0A7U3 40866347
    940747 9b4z:AT (2.2) BS01 rna N/A GO:0000028 ... P0A7U7 40866347
    940748 9b4z:AU (2.2) BS01 rna N/A GO:0000028 ... P68679 40866347
    940749 9b4z:B0 (2.2) BS01 rna N/A GO:0000027 ... P0A7N4 40866347
    940750 9b4z:B1 (2.2) BS01 rna N/A GO:0000027 ... P0A7N9 40866347
    940751 9b4z:B2 (2.2) BS01 rna N/A GO:0002181 ... P0A7P5 40866347
    940752 9b4z:B3 (2.2) BS01 rna N/A GO:0002181 ... P0A7Q1 40866347
    940753 9b4z:B4 (2.2) BS01 rna N/A GO:0002181 ... P0A7Q6 40866347
    940754 9b4z:B4 (2.2) BS02 ZN N/A GO:0002181 ... P0A7Q6 40866347
    940755 9b4z:B5 (2.2) BS01 rna N/A GO:0002181 ... P0A7M9 40866347
    940756 9b4z:B5 (2.2) BS02 rna N/A GO:0002181 ... P0A7M9 40866347
    940757 9b4z:B5 (2.2) BS03 ZN N/A GO:0002181 ... P0A7M9 40866347
    940758 9b4z:BC (2.2) BS01 rna N/A GO:0000027 ... P60422 40866347
    940759 9b4z:BD (2.2) BS01 rna N/A GO:0000027 ... P60438 40866347
    940760 9b4z:BE (2.2) BS01 rna N/A GO:0001070 ... P60723 40866347
    940761 9b4z:BF (2.2) BS01 rna N/A GO:0000027 ... P62399 40866347
    940762 9b4z:BF (2.2) BS02 rna N/A GO:0000027 ... P62399 40866347
    940763 9b4z:BF (2.2) BS03 rna N/A GO:0000027 ... P62399 40866347
    940764 9b4z:BG (2.2) BS01 rna N/A GO:0000027 ... P0AG55 40866347
    940765 9b4z:BH (2.2) BS01 rna N/A GO:0002181 ... P0A7R1 40866347
    940766 9b4z:BJ (2.2) BS01 rna N/A GO:0002181 ... P0AA10 40866347
    940767 9b4z:BK (2.2) BS01 rna N/A GO:0002181 ... P0ADY3 40866347
    940768 9b4z:BK (2.2) BS02 rna N/A GO:0002181 ... P0ADY3 40866347
    940769 9b4z:BL (2.2) BS01 rna N/A GO:0002181 ... P02413 40866347
    940770 9b4z:BM (2.2) BS01 rna N/A GO:0000027 ... P0ADY7 40866347
    940771 9b4z:BM (2.2) BS02 rna N/A GO:0000027 ... P0ADY7 40866347
    940772 9b4z:BM (2.2) BS03 rna N/A GO:0000027 ... P0ADY7 40866347
    940773 9b4z:BN (2.2) BS01 rna N/A GO:0000027 ... P0AG44 40866347
    940774 9b4z:BO (2.2) BS01 rna N/A GO:0002181 ... P0C018 40866347
    940775 9b4z:BO (2.2) BS02 rna N/A GO:0002181 ... P0C018 40866347
    940776 9b4z:BP (2.2) BS01 rna N/A GO:0000027 ... P0A7K6 40866347
    940777 9b4z:BP (2.2) BS02 rna N/A GO:0000027 ... P0A7K6 40866347
    940778 9b4z:BQ (2.2) BS01 rna N/A GO:0000027 ... P0A7L3 40866347
    940779 9b4z:BR (2.2) BS01 rna N/A GO:0002181 ... P0AG48 40866347
    940780 9b4z:BS (2.2) BS01 rna N/A GO:0002181 ... P61175 40866347
    940781 9b4z:BT (2.2) BS01 rna N/A GO:0000027 ... P0ADZ0 40866347
    940782 9b4z:BU (2.2) BS01 rna N/A GO:0000027 ... P60624 40866347
    940783 9b4z:BV (2.2) BS01 rna N/A GO:0000027 ... P68919 40866347
    940784 9b4z:BW (2.2) BS01 rna N/A GO:0000027 ... P0A7L8 40866347
    940785 9b4z:BW (2.2) BS02 rna N/A GO:0000027 ... P0A7L8 40866347
    940786 9b4z:BX (2.2) BS01 rna N/A GO:0000027 ... P0A7M2 40866347
    940787 9b4z:BY (2.2) BS01 rna N/A GO:0000027 ... P0A7M6 40866347
    940788 9b4z:BZ (2.2) BS01 rna N/A GO:0000027 ... P0AG51 40866347
    940789 9b50:AB (2.7) BS01 rna N/A GO:0000028 ... P0A7V0 40866347
    940790 9b50:AC (2.7) BS01 rna N/A GO:0000028 ... P0A7V3 40866347
    940791 9b50:AD (2.7) BS01 rna N/A GO:0000028 ... P0A7V8 40866347
    940792 9b50:AE (2.7) BS01 rna N/A GO:0000028 ... P0A7W1 40866347
    940793 9b50:AF (2.7) BS01 rna N/A GO:0002181 ... P02358 40866347
    940794 9b50:AG (2.7) BS01 rna N/A GO:0000028 ... P02359 40866347
    940795 9b50:AH (2.7) BS01 rna N/A GO:0000028 ... P0A7W7 40866347
    940796 9b50:AI (2.7) BS01 rna N/A GO:0002181 ... P0A7X3 40866347
    940797 9b50:AJ (2.7) BS01 rna N/A GO:0000049 ... P0A7R5 40866347
    940798 9b50:AK (2.7) BS01 rna N/A GO:0002181 ... P0A7R9 40866347
    940799 9b50:AL (2.7) BS01 rna N/A GO:0000049 ... P0A7S3 40866347
    940800 9b50:AM (2.7) BS01 rna N/A GO:0000049 ... P0A7S9 40866347

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).