SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    941001 9b6e:B (2.91) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941002 9b6e:C (2.91) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941003 9b6e:C (2.91) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941004 9b6e:D (2.91) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941005 9b6e:D (2.91) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941006 9b6f:A (3.42) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941007 9b6f:A (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941008 9b6f:A (3.42) BS03 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    941009 9b6f:B (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    941010 9b6f:B (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941011 9b6f:B (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941012 9b6f:C (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    941013 9b6f:C (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941014 9b6f:C (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941015 9b6f:D (3.42) BS01 A1AIY N/A GO:0005216 ... Q8R4D5 39093967
    941016 9b6f:D (3.42) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941017 9b6f:D (3.42) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941018 9b6g:A (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941019 9b6g:A (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941020 9b6g:A (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941021 9b6g:A (2.81) BS04 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    941022 9b6g:A (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941023 9b6g:A (2.81) BS06 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941024 9b6g:B (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941025 9b6g:B (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941026 9b6g:B (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941027 9b6g:B (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941028 9b6g:B (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941029 9b6g:B (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    941030 9b6g:C (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941031 9b6g:C (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941032 9b6g:C (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941033 9b6g:C (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941034 9b6g:C (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941035 9b6g:C (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    941036 9b6g:D (2.81) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941037 9b6g:D (2.81) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941038 9b6g:D (2.81) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941039 9b6g:D (2.81) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941040 9b6g:D (2.81) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941041 9b6g:D (2.81) BS06 LQ7 N/A GO:0005216 ... Q8R4D5 39093967
    941042 9b6h:A (2.76) BS01 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941043 9b6h:A (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941044 9b6h:A (2.76) BS03 ULO N/A GO:0005216 ... Q8R4D5 39093967
    941045 9b6h:A (2.76) BS04 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941046 9b6h:A (2.76) BS05 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941047 9b6h:B (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941048 9b6h:B (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941049 9b6h:B (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941050 9b6h:B (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941051 9b6h:B (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    941052 9b6h:C (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941053 9b6h:C (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941054 9b6h:C (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941055 9b6h:C (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941056 9b6h:C (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    941057 9b6h:D (2.76) BS01 T14 N/A GO:0005216 ... Q8R4D5 39093967
    941058 9b6h:D (2.76) BS02 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941059 9b6h:D (2.76) BS03 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941060 9b6h:D (2.76) BS04 Y01 N/A GO:0005216 ... Q8R4D5 39093967
    941061 9b6h:D (2.76) BS05 ULO N/A GO:0005216 ... Q8R4D5 39093967
    941062 9b6i:A (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941063 9b6i:A (3.26) BS02 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941064 9b6i:A (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941065 9b6i:A (3.26) BS04 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941066 9b6i:A (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941067 9b6i:A (3.26) BS06 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941068 9b6i:A (3.26) BS07 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941069 9b6i:B (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941070 9b6i:B (3.26) BS02 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941071 9b6i:B (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941072 9b6i:B (3.26) BS04 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941073 9b6i:B (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941074 9b6i:B (3.26) BS06 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941075 9b6i:B (3.26) BS07 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941076 9b6i:C (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941077 9b6i:C (3.26) BS02 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941078 9b6i:C (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941079 9b6i:C (3.26) BS04 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941080 9b6i:C (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941081 9b6i:C (3.26) BS06 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941082 9b6i:C (3.26) BS07 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941083 9b6i:D (3.26) BS01 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941084 9b6i:D (3.26) BS02 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941085 9b6i:D (3.26) BS03 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941086 9b6i:D (3.26) BS04 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941087 9b6i:D (3.26) BS05 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941088 9b6i:D (3.26) BS06 Y01 N/A GO:0005216 ... A0A5S8WF66 39093967
    941089 9b6i:D (3.26) BS07 T14 N/A GO:0005216 ... A0A5S8WF66 39093967
    941090 9b6j:A (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941091 9b6j:A (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    941092 9b6j:B (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941093 9b6j:B (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    941094 9b6j:C (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941095 9b6j:C (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    941096 9b6j:D (3.53) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941097 9b6j:D (3.53) BS02 PIO N/A GO:0005216 ... Q8R4D5 39093967
    941098 9b6k:A (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941099 9b6k:B (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941100 9b6k:C (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941101 9b6k:D (4.13) BS01 CA N/A GO:0005216 ... Q8R4D5 39093967
    941102 9b6l:A (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941103 9b6l:B (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941104 9b6l:C (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941105 9b6l:D (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941106 9b6l:E (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941107 9b6l:F (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941108 9b6l:G (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941109 9b6l:H (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941110 9b6l:I (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941111 9b6l:J (2.33) BS01 MG N/A GO:0000287 ... A0A150IHQ4 N/A
    941112 9b70:A (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    941113 9b70:B (2.88) BS01 A1AI1 N/A GO:0005886 ... O66465 38877016
    941114 9b71:A (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    941115 9b71:B (2.7) BS01 A1AI2 N/A GO:0005886 ... O66465 38877016
    941116 9b73:A (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    941117 9b73:A (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    941118 9b73:B (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    941119 9b73:B (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    941120 9b73:C (1.96) BS01 ATP N/A GO:0000166 ... P51575 39341830
    941121 9b73:C (1.96) BS02 ATP N/A GO:0000166 ... P51575 39341830
    941122 9b7a:A (1.71) BS01 ROA N/A GO:0016209 ... Q06830 39799115
    941123 9b7a:B (1.71) BS01 ROA N/A GO:0016209 ... Q06830 39799115
    941124 9b7j:A (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941125 9b7j:B (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941126 9b7j:C (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941127 9b7j:D (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941128 9b7j:E (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941129 9b7j:F (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941130 9b7j:G (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941131 9b7j:H (3.49) BS01 ANP N/A GO:0000776 ... P60709 40186871
    941132 9b7j:I (3.49) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941133 9b7j:K (3.49) BS01 ZN N/A GO:0000776 ... Q9UJW0 40186871
    941134 9b7j:K (3.49) BS02 ZN N/A GO:0000776 ... Q9UJW0 40186871
    941135 9b7j:K (3.49) BS03 ZN N/A GO:0000776 ... Q9UJW0 40186871
    941136 9b7m:C (2.82) BS01 CA N/A GO:0005198 ... Q6JC40 40253479
    941137 9b7y:A (2.51) BS01 dna N/A GO:0000976 ... P95251 39545866
    941138 9b7y:A (2.51) BS02 dna N/A GO:0000976 ... P95251 39545866
    941139 9b7y:D (2.51) BS01 dna N/A GO:0000976 ... P95251 39545866
    941140 9b7y:D (2.51) BS02 dna N/A GO:0000976 ... P95251 39545866
    941141 9b81:A (2.56) BS01 A1AI4 N/A GO:0000287 ... O75874 39251618
    941142 9b81:A (2.56) BS02 NAP N/A GO:0000287 ... O75874 39251618
    941143 9b81:B (2.56) BS01 A1AI4 N/A GO:0000287 ... O75874 39251618
    941144 9b81:B (2.56) BS02 NAP N/A GO:0000287 ... O75874 39251618
    941145 9b83:A (3.01) BS01 rna N/A GO:0003723 ... P55265 40101712
    941146 9b83:A (3.01) BS02 IHP N/A GO:0003723 ... P55265 40101712
    941147 9b83:A (3.01) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941148 9b83:A (3.01) BS04 ZN N/A GO:0003723 ... P55265 40101712
    941149 9b83:B (3.01) BS01 IHP N/A GO:0003723 ... P55265 40101712
    941150 9b83:B (3.01) BS02 ZN N/A GO:0003723 ... P55265 40101712
    941151 9b83:B (3.01) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941152 9b84:A (3.2) BS01 rna N/A GO:0003723 ... P55265 40101712
    941153 9b84:A (3.2) BS02 IHP N/A GO:0003723 ... P55265 40101712
    941154 9b84:A (3.2) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941155 9b84:B (3.2) BS01 IHP N/A GO:0003723 ... P55265 40101712
    941156 9b84:B (3.2) BS02 ZN N/A GO:0003723 ... P55265 40101712
    941157 9b84:B (3.2) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941158 9b85:A (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941159 9b85:B (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941160 9b85:C (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941161 9b85:D (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941162 9b85:E (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941163 9b85:F (3.47) BS01 peptide N/A GO:0005200 ... P61163 40186871
    941164 9b85:F (3.47) BS02 ADP N/A GO:0005200 ... P61163 40186871
    941165 9b85:G (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941166 9b85:H (3.47) BS01 ANP N/A GO:0000776 ... P60709 40186871
    941167 9b85:I (3.47) BS01 ADP N/A GO:0005200 ... P61163 40186871
    941168 9b85:K (3.47) BS01 ZN N/A GO:0000776 ... Q9UJW0 40186871
    941169 9b85:K (3.47) BS02 ZN N/A GO:0000776 ... Q9UJW0 40186871
    941170 9b86:A (1.6) BS01 MG N/A GO:0016852 ... Q7MWF2 N/A
    941171 9b86:A (1.6) BS02 MG N/A GO:0016852 ... Q7MWF2 N/A
    941172 9b86:A (1.6) BS03 MG N/A GO:0016852 ... Q7MWF2 N/A
    941173 9b86:A (1.6) BS04 MG N/A GO:0016852 ... Q7MWF2 N/A
    941174 9b89:A (3.87) BS01 rna N/A GO:0003723 ... P55265 40101712
    941175 9b89:A (3.87) BS02 IHP N/A GO:0003723 ... P55265 40101712
    941176 9b89:A (3.87) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941177 9b89:A (3.87) BS04 ZN N/A GO:0003723 ... P55265 40101712
    941178 9b89:B (3.87) BS01 IHP N/A GO:0003723 ... P55265 40101712
    941179 9b89:B (3.87) BS02 ZN N/A GO:0003723 ... P55265 40101712
    941180 9b89:B (3.87) BS03 ZN N/A GO:0003723 ... P55265 40101712
    941181 9b8c:H (3.3) BS01 BMA N/A N/A N/A 40845127
    941182 9b8c:H (3.3) BS02 MAN N/A N/A N/A 40845127
    941183 9b8c:H (3.3) BS03 MAN N/A N/A N/A 40845127
    941184 9b8c:H (3.3) BS04 MAN N/A N/A N/A 40845127
    941185 9b8f:A (4.15) BS01 FUC N/A GO:0005515 ... P0DTC2 N/A
    941186 9b8h:A (3.8) BS01 BGC N/A GO:0019867 ... P37650 39242554
    941187 9b8m:A (2.9) BS01 PLP N/A GO:0003824 ... P11926 40035393
    941188 9b8m:A (2.9) BS02 A1AQO N/A GO:0003824 ... P11926 40035393
    941189 9b8m:B (2.9) BS01 A1AQO N/A GO:0003824 ... P11926 40035393
    941190 9b8m:B (2.9) BS02 PLP N/A GO:0003824 ... P11926 40035393
    941191 9b8n:A (2.0) BS01 PLP N/A GO:0003824 ... P11926 40035393
    941192 9b8n:A (2.0) BS02 A1AQP N/A GO:0003824 ... P11926 40035393
    941193 9b8n:A (2.0) BS03 A1AQP N/A GO:0003824 ... P11926 40035393
    941194 9b8n:B (2.0) BS01 A1AQP N/A GO:0003824 ... P11926 40035393
    941195 9b8n:B (2.0) BS02 PLP N/A GO:0003824 ... P11926 40035393
    941196 9b8n:B (2.0) BS03 A1AQP N/A GO:0003824 ... P11926 40035393
    941197 9b8o:H (3.2) BS01 peptide N/A GO:0046961 ... Q6P503 38900912
    941198 9b8o:a (3.2) BS01 MAN N/A GO:0000220 ... P25286 38900912
    941199 9b8o:a (3.2) BS02 GLC N/A GO:0000220 ... P25286 38900912
    941200 9b8o:a (3.2) BS03 WJP N/A GO:0000220 ... P25286 38900912

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).