SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    941201 9b8o:a (3.2) BS04 LP3 N/A GO:0000220 ... P25286 38900912
    941202 9b8o:f (3.2) BS01 LP3 N/A GO:0004521 ... D3ZIM6 38900912
    941203 9b8o:h (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941204 9b8o:i (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941205 9b8o:i (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941206 9b8o:i (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941207 9b8o:j (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941208 9b8o:j (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941209 9b8o:j (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941210 9b8o:j (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    941211 9b8o:k (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941212 9b8o:k (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941213 9b8o:k (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941214 9b8o:l (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941215 9b8o:l (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941216 9b8o:l (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941217 9b8o:m (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941218 9b8o:m (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941219 9b8o:m (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941220 9b8o:n (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941221 9b8o:n (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941222 9b8o:n (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941223 9b8o:n (3.2) BS04 CLR N/A GO:0000220 ... P63081 38900912
    941224 9b8o:n (3.2) BS05 CLR N/A GO:0000220 ... P63081 38900912
    941225 9b8o:o (3.2) BS01 CLR N/A GO:0000220 ... P63081 38900912
    941226 9b8o:o (3.2) BS02 CLR N/A GO:0000220 ... P63081 38900912
    941227 9b8o:o (3.2) BS03 CLR N/A GO:0000220 ... P63081 38900912
    941228 9b8p:A (3.2) BS01 ADP N/A GO:0005515 ... D4A133 38900912
    941229 9b8p:D (3.2) BS01 ADP N/A GO:0000221 ... P62815 38900912
    941230 9b8r:E (3.5) BS01 dna N/A GO:0000166 ... P21951 39088616
    941231 9b8r:E (3.5) BS02 dna N/A GO:0000166 ... P21951 39088616
    941232 9b8r:E (3.5) BS03 SF4 N/A GO:0000166 ... P21951 39088616
    941233 9b8s:A (5.01) BS01 dna N/A GO:0000082 ... Q07864 39245668
    941234 9b8s:A (5.01) BS02 dna N/A GO:0000082 ... Q07864 39245668
    941235 9b8s:A (5.01) BS03 SF4 N/A GO:0000082 ... Q07864 39245668
    941236 9b8t:A (2.95) BS01 dna N/A GO:0000082 ... Q07864 39245668
    941237 9b8t:A (2.95) BS02 dna N/A GO:0000082 ... Q07864 39245668
    941238 9b8t:A (2.95) BS03 TTP N/A GO:0000082 ... Q07864 39245668
    941239 9b8t:A (2.95) BS04 MG N/A GO:0000082 ... Q07864 39245668
    941240 9b8t:A (2.95) BS05 SF4 N/A GO:0000082 ... Q07864 39245668
    941241 9b8u:A (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    941242 9b8u:A (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    941243 9b8u:B (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    941244 9b8u:B (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    941245 9b8u:C (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    941246 9b8u:C (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    941247 9b8u:D (2.9) BS01 dna N/A GO:0000981 ... O43186 39084215
    941248 9b8u:D (2.9) BS02 dna N/A GO:0000981 ... O43186 39084215
    941249 9b8w:A (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941250 9b8w:A (3.1) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941251 9b8w:B (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941252 9b8w:B (3.1) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941253 9b8w:C (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941254 9b8w:C (3.1) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941255 9b8w:D (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941256 9b8w:D (3.1) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941257 9b8x:A (3.0) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941258 9b8x:A (3.0) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941259 9b8y:A (3.2) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941260 9b8y:A (3.2) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941261 9b8y:A (3.2) BS03 DVT ? GO:0002407 ... Q8TD43 38750366
    941262 9b8y:B (3.2) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941263 9b8y:B (3.2) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941264 9b8y:B (3.2) BS03 DVT ? GO:0002407 ... Q8TD43 38750366
    941265 9b8y:C (3.2) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941266 9b8y:C (3.2) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941267 9b8y:C (3.2) BS03 DVT ? GO:0002407 ... Q8TD43 38750366
    941268 9b8y:D (3.2) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941269 9b8y:D (3.2) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941270 9b8y:D (3.2) BS03 DVT ? GO:0002407 ... Q8TD43 38750366
    941271 9b8z:A (3.4) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941272 9b8z:A (3.4) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941273 9b8z:A (3.4) BS03 DVT ? GO:0002407 ... Q8TD43 38750366
    941274 9b90:A (3.4) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941275 9b90:A (3.4) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941276 9b90:A (3.4) BS03 ATP ? GO:0002407 ... Q8TD43 38750366
    941277 9b90:B (3.4) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941278 9b90:B (3.4) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941279 9b90:B (3.4) BS03 ATP ? GO:0002407 ... Q8TD43 38750366
    941280 9b90:C (3.4) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941281 9b90:C (3.4) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941282 9b90:C (3.4) BS03 ATP ? GO:0002407 ... Q8TD43 38750366
    941283 9b90:D (3.4) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941284 9b90:D (3.4) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941285 9b90:D (3.4) BS03 ATP ? GO:0002407 ... Q8TD43 38750366
    941286 9b91:A (3.3) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941287 9b91:A (3.3) BS02 CA ? GO:0002407 ... Q8TD43 38750366
    941288 9b91:A (3.3) BS03 ATP ? GO:0002407 ... Q8TD43 38750366
    941289 9b92:A (3.5) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941290 9b92:B (3.5) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941291 9b92:C (3.5) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941292 9b92:D (3.5) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941293 9b94:A (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941294 9b94:B (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941295 9b94:C (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941296 9b94:D (3.1) BS01 CA ? GO:0002407 ... Q8TD43 38750366
    941297 9b95:A (2.61) BS01 A1ALI N/A GO:0000166 ... P51575 39341830
    941298 9b95:A (2.61) BS02 A1ALI N/A GO:0000166 ... P51575 39341830
    941299 9b95:B (2.61) BS01 A1ALI N/A GO:0000166 ... P51575 39341830
    941300 9b95:B (2.61) BS02 A1ALI N/A GO:0000166 ... P51575 39341830
    941301 9b95:C (2.61) BS01 A1ALI N/A GO:0000166 ... P51575 39341830
    941302 9b95:C (2.61) BS02 A1ALI N/A GO:0000166 ... P51575 39341830
    941303 9b96:A (1.64) BS01 A1AJA N/A GO:0000791 ... Q9Y2J8 39316753
    941304 9b96:A (1.64) BS02 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941305 9b96:A (1.64) BS03 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941306 9b96:A (1.64) BS04 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941307 9b96:A (1.64) BS05 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941308 9b97:A (1.95) BS01 A1AJB N/A GO:0000791 ... Q9Y2J8 39316753
    941309 9b97:A (1.95) BS02 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941310 9b97:A (1.95) BS03 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941311 9b97:A (1.95) BS04 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941312 9b97:A (1.95) BS05 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941313 9b97:A (1.95) BS06 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941314 9b98:A (2.003) BS01 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941315 9b98:A (2.003) BS02 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941316 9b98:A (2.003) BS03 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941317 9b98:A (2.003) BS04 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941318 9b98:A (2.003) BS05 CA N/A GO:0000791 ... Q9Y2J8 39316753
    941319 9b98:A (2.003) BS06 A1AJC N/A GO:0000791 ... Q9Y2J8 39316753
    941320 9b9g:H (3.5) BS01 CA N/A GO:0004721 ... P63098 39216471
    941321 9b9g:H (3.5) BS02 CA N/A GO:0004721 ... P63098 39216471
    941322 9b9g:J (3.5) BS01 CA N/A GO:0004721 ... P63098 39216471
    941323 9b9g:J (3.5) BS02 CA N/A GO:0004721 ... P63098 39216471
    941324 9b9h:A (2.06) BS01 A1AM2 N/A GO:0000122 ... P61964 39580491
    941325 9b9h:B (2.06) BS01 A1AM2 N/A GO:0016567 ... Q9Y4B6 39580491
    941326 9b9j:A (2.6) BS01 CA N/A GO:0007155 ... P08648 39829743
    941327 9b9j:A (2.6) BS02 CA N/A GO:0007155 ... P08648 39829743
    941328 9b9j:A (2.6) BS03 CA N/A GO:0007155 ... P08648 39829743
    941329 9b9j:A (2.6) BS04 CA N/A GO:0007155 ... P08648 39829743
    941330 9b9j:B (2.6) BS01 CA N/A N/A P05556 39829743
    941331 9b9j:B (2.6) BS02 CA N/A N/A P05556 39829743
    941332 9b9j:B (2.6) BS03 CA N/A N/A P05556 39829743
    941333 9b9k:A (2.7) BS01 CA N/A GO:0007155 ... P08648 39829743
    941334 9b9k:A (2.7) BS02 CA N/A GO:0007155 ... P08648 39829743
    941335 9b9k:A (2.7) BS03 CA N/A GO:0007155 ... P08648 39829743
    941336 9b9k:A (2.7) BS04 CA N/A GO:0007155 ... P08648 39829743
    941337 9b9k:B (2.7) BS01 CA N/A N/A P05556 39829743
    941338 9b9k:B (2.7) BS02 CA N/A N/A P05556 39829743
    941339 9b9k:L (2.7) BS01 MAN N/A N/A N/A 39829743
    941340 9b9l:A (2.5) BS01 peptide N/A N/A Q9NQG5 39241064
    941341 9b9m:A (2.07) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941342 9b9m:B (2.07) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941343 9b9m:C (2.07) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941344 9b9m:D (2.07) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941345 9b9n:A (2.28) BS01 A1AL2 N/A GO:0004553 ... Q9HY91 39220707
    941346 9b9n:A (2.28) BS02 FE N/A GO:0004553 ... Q9HY91 39220707
    941347 9b9n:B (2.28) BS01 A1AL2 N/A GO:0004553 ... Q9HY91 39220707
    941348 9b9n:B (2.28) BS02 FE N/A GO:0004553 ... Q9HY91 39220707
    941349 9b9o:A (2.16) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941350 9b9o:A (2.16) BS02 A1AL2 N/A GO:0004553 ... Q9HY91 39220707
    941351 9b9o:B (2.16) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    941352 9b9o:B (2.16) BS02 A1AL2 N/A GO:0004553 ... Q9HY91 39220707
    941353 9b9p:A (3.18) BS01 A1AKJ N/A GO:0000287 ... Q2FWK4 40386891
    941354 9b9p:A (3.18) BS02 MG N/A GO:0000287 ... Q2FWK4 40386891
    941355 9b9p:A (3.18) BS03 A1AKJ N/A GO:0000287 ... Q2FWK4 40386891
    941356 9b9p:B (3.18) BS01 A1AKJ N/A GO:0000287 ... Q2FWK4 40386891
    941357 9b9p:B (3.18) BS02 A1AKJ N/A GO:0000287 ... Q2FWK4 40386891
    941358 9b9p:B (3.18) BS03 MG N/A GO:0000287 ... Q2FWK4 40386891
    941359 9b9q:A (3.14) BS01 peptide N/A GO:0140737 ... Q1D6H4 39226211
    941360 9b9q:B (3.14) BS01 peptide N/A GO:0140737 ... Q1D6H4 39226211
    941361 9b9q:C (3.14) BS01 peptide N/A GO:0140737 ... Q1D6H4 39226211
    941362 9b9s:A (3.6) BS01 GUN N/A N/A L9UCI1 39529381
    941363 9b9t:A (2.05) BS01 A1ANM N/A GO:0000122 ... P61964 39580491
    941364 9b9t:B (2.05) BS01 A1ANM N/A GO:0016567 ... Q9Y4B6 39580491
    941365 9b9u:A (2.86) BS01 FUC N/A GO:0005515 ... P0DTC2 N/A
    941366 9b9u:B (2.86) BS01 BMA N/A GO:0005515 ... P0DTC2 N/A
    941367 9b9u:C (2.86) BS01 FUC N/A GO:0005515 ... P0DTC2 N/A
    941368 9b9w:A (1.92) BS01 A1ANN N/A GO:0000122 ... P61964 39580491
    941369 9b9w:B (1.92) BS01 A1ANN N/A GO:0016567 ... Q9Y4B6 39580491
    941370 9b9x:A (3.63) BS01 HPA N/A N/A L9UCI1 39529381
    941371 9b9y:R (3.5) BS01 7DY N/A GO:0004930 ... P21554
    Q9V2J8
    39695122
    941372 9b9z:R (3.3) BS01 A1AKO N/A GO:0004930 ... P21554
    Q9V2J8
    39695122
    941373 9ba0:R (3.13) BS01 A1AKN N/A GO:0004930 ... P21554
    Q9V2J8
    39695122
    941374 9ba1:A (-1.00) BS01 CA N/A GO:0005509 ... O95202 39317198
    941375 9ba3:A (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941376 9ba3:B (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941377 9ba3:C (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941378 9ba3:D (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941379 9ba3:E (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941380 9ba3:F (2.1) BS01 GUN N/A N/A L9UCI1 39529381
    941381 9ba7:A (2.88) BS01 GDP N/A GO:0005525 ... A0A0X1KYD0 39128725
    941382 9ba8:A (2.54) BS01 A1AKM N/A N/A O60502 39748851
    941383 9ba8:B (2.54) BS01 A1AKM N/A N/A O60502 39748851
    941384 9ba9:A (2.75) BS01 A1AKL N/A N/A O60502 39748851
    941385 9bab:z (3.5) BS01 CA N/A N/A N/A 41083437
    941386 9bab:z (3.5) BS02 CA N/A N/A N/A 41083437
    941387 9bac:z (3.4) BS01 CA N/A N/A N/A 41083437
    941388 9bac:z (3.4) BS02 CA N/A N/A N/A 41083437
    941389 9bae:A (2.73) BS01 MG N/A GO:0000287 ... Q2FWK4 40386891
    941390 9bae:A (2.73) BS02 MG N/A GO:0000287 ... Q2FWK4 40386891
    941391 9bae:A (2.73) BS03 A1AKY N/A GO:0000287 ... Q2FWK4 40386891
    941392 9bae:A (2.73) BS04 A1AKY N/A GO:0000287 ... Q2FWK4 40386891
    941393 9bae:B (2.73) BS01 A1AKY N/A GO:0000287 ... Q2FWK4 40386891
    941394 9bae:B (2.73) BS02 MG N/A GO:0000287 ... Q2FWK4 40386891
    941395 9bae:B (2.73) BS03 A1AKY N/A GO:0000287 ... Q2FWK4 40386891
    941396 9bag:A (1.96) BS01 MG N/A GO:0000287 ... Q65XK0 40386891
    941397 9bag:A (1.96) BS02 A1AKJ N/A GO:0000287 ... Q65XK0 40386891
    941398 9bag:B (1.96) BS01 MG N/A GO:0000287 ... Q65XK0 40386891
    941399 9bag:B (1.96) BS02 MG N/A GO:0000287 ... Q65XK0 40386891
    941400 9bag:B (1.96) BS03 A1AKJ N/A GO:0000287 ... Q65XK0 40386891

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).